Literature DB >> 25370826

Homologous recombinatorial cloning without the creation of single-stranded ends: exonuclease and ligation-independent cloning (ELIC).

Essi V Koskela1, Alexander D Frey.   

Abstract

We describe a new type of molecular cloning that complements the available strategies for homologous recombinatorial cloning. Purified, linear double-stranded DNA molecules with homologous ends are simply mixed in water and they transform readily into E. coli. Insert and linear vector need as few as ten base pairs of homologous sequence at their ends and essentially no incubation or enzyme treatments are needed for creating recombinants from linear fragments. Our method outcompetes most existing cloning methods in simplicity and affordability and is well-suited for high-throughput applications.

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Year:  2015        PMID: 25370826     DOI: 10.1007/s12033-014-9817-2

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.695


  20 in total

1.  Enzyme-free cloning: a rapid method to clone PCR products independent of vector restriction enzyme sites.

Authors:  D Tillett; B A Neilan
Journal:  Nucleic Acids Res       Date:  1999-10-01       Impact factor: 16.971

2.  Ligation-independent cloning of PCR products (LIC-PCR).

Authors:  C Aslanidis; P J de Jong
Journal:  Nucleic Acids Res       Date:  1990-10-25       Impact factor: 16.971

3.  Enzyme free cloning for high throughput gene cloning and expression.

Authors:  Rob N de Jong; Mark A Daniëls; Rob Kaptein; Gert E Folkers
Journal:  J Struct Funct Genomics       Date:  2007-02-13

4.  Combining the polymerase incomplete primer extension method for cloning and mutagenesis with microscreening to accelerate structural genomics efforts.

Authors:  Heath E Klock; Eric J Koesema; Mark W Knuth; Scott A Lesley
Journal:  Proteins       Date:  2008-05-01

Review 5.  High-throughput cloning and expression library creation for functional proteomics.

Authors:  Fernanda Festa; Jason Steel; Xiaofang Bian; Joshua Labaer
Journal:  Proteomics       Date:  2013-04-05       Impact factor: 3.984

6.  Association of poly(CA).poly(TG) DNA fragments into four-stranded complexes bound by HMG1 and 2.

Authors:  C Gaillard; F Strauss
Journal:  Science       Date:  1994-04-15       Impact factor: 47.728

7.  Yeast vectors for the controlled expression of heterologous proteins in different genetic backgrounds.

Authors:  D Mumberg; R Müller; M Funk
Journal:  Gene       Date:  1995-04-14       Impact factor: 3.688

8.  FastCloning: a highly simplified, purification-free, sequence- and ligation-independent PCR cloning method.

Authors:  Chaokun Li; Aiyun Wen; Benchang Shen; Jia Lu; Yao Huang; Yongchang Chang
Journal:  BMC Biotechnol       Date:  2011-10-12       Impact factor: 2.563

9.  Golden gate shuffling: a one-pot DNA shuffling method based on type IIs restriction enzymes.

Authors:  Carola Engler; Ramona Gruetzner; Romy Kandzia; Sylvestre Marillonnet
Journal:  PLoS One       Date:  2009-05-14       Impact factor: 3.240

10.  A practical comparison of ligation-independent cloning techniques.

Authors:  Julian Stevenson; James R Krycer; Lisa Phan; Andrew J Brown
Journal:  PLoS One       Date:  2013-12-23       Impact factor: 3.240

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  9 in total

1.  TA-GC cloning: A new simple and versatile technique for the directional cloning of PCR products for recombinant protein expression.

Authors:  Athanasios Niarchos; Anastasia Siora; Evangelia Konstantinou; Vasiliki Kalampoki; George Lagoumintzis; Konstantinos Poulas
Journal:  PLoS One       Date:  2017-11-01       Impact factor: 3.240

2.  Exploiting genetic diversity and gene synthesis to identify superior nitrogenase NifH protein variants to engineer N2-fixation in plants.

Authors:  Xi Jiang; Lucía Payá-Tormo; Diana Coroian; Inés García-Rubio; Rocío Castellanos-Rueda; Álvaro Eseverri; Gema López-Torrejón; Stefan Burén; Luis Manuel Rubio
Journal:  Commun Biol       Date:  2021-01-04

3.  Production of galactosylated complex-type N-glycans in glycoengineered Saccharomyces cerevisiae.

Authors:  Mari A Piirainen; Heidi Salminen; Alexander D Frey
Journal:  Appl Microbiol Biotechnol       Date:  2021-12-15       Impact factor: 4.813

4.  A colorimetric method to measure in vitro nitrogenase functionality for engineering nitrogen fixation.

Authors:  Lucía Payá-Tormo; Diana Coroian; Silvia Martín-Muñoz; Artavazd Badalyan; Robert T Green; Marcel Veldhuizen; Xi Jiang; Gema López-Torrejón; Janneke Balk; Lance C Seefeldt; Stefan Burén; Luis M Rubio
Journal:  Sci Rep       Date:  2022-06-20       Impact factor: 4.996

5.  Cloning Should Be Simple: Escherichia coli DH5α-Mediated Assembly of Multiple DNA Fragments with Short End Homologies.

Authors:  Maxim Kostylev; Anne E Otwell; Ruth E Richardson; Yo Suzuki
Journal:  PLoS One       Date:  2015-09-08       Impact factor: 3.240

6.  Enhancing antibody folding and secretion by tailoring the Saccharomyces cerevisiae endoplasmic reticulum.

Authors:  Jorg C de Ruijter; Essi V Koskela; Alexander D Frey
Journal:  Microb Cell Fact       Date:  2016-05-23       Impact factor: 5.328

7.  Homologous alignment cloning: a rapid, flexible and highly efficient general molecular cloning method.

Authors:  Lendl Tan; Emily J Strong; Kyra Woods; Nicholas P West
Journal:  PeerJ       Date:  2018-06-29       Impact factor: 2.984

8.  Mining Data From Plasma Cell Differentiation Identified Novel Genes for Engineering of a Yeast Antibody Factory.

Authors:  Essi V Koskela; Alina Gonzalez Salcedo; Mari A Piirainen; Heidi A Iivonen; Heidi Salminen; Alexander D Frey
Journal:  Front Bioeng Biotechnol       Date:  2020-03-31

9.  Simplified plasmid cloning with a universal MCS design and bacterial in vivo assembly.

Authors:  Fan Chen; Yi-Ya Li; Yan-Li Yu; Jie Dai; Jin-Ling Huang; Jie Lin
Journal:  BMC Biotechnol       Date:  2021-03-15       Impact factor: 2.563

  9 in total

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