Literature DB >> 25369463

Tyrosine 110 plays a critical role in regulating the allosteric inhibition of Campylobacter jejuni dihydrodipicolinate synthase by lysine.

Cuylar J T Conly1, Yulia V Skovpen, Shuo Li, David R J Palmer, David A R Sanders.   

Abstract

Dihydrodipicolinate synthase (DHDPS), an enzyme found in most bacteria and plants, controls a critical step in the biosynthesis of l-lysine and meso-diaminopimelate, necessary components for bacterial cell wall biosynthesis. DHDPS catalyzes the condensation of pyruvate and (S)-aspartate-β-semialdehyde, forming an unstable product that is dehydrated to dihydrodipicolinate. The tetrameric enzyme is allosterically inhibited by l-lysine, and a better understanding of the allosteric inhibition mechanism is necessary for the design of potent antibacterial therapeutics. Here we describe the high-resolution crystal structures of DHDPS from Campylobacter jejuni with and without its inhibitor bound to the allosteric sites. These structures reveal a role for Y110 in the regulation of the allosteric inhibition by lysine. Mutation of Y110 to phenylalanine results in insensitivity to lysine inhibition, although the mutant crystal structure reveals that lysine does bind in the allosteric site. Comparison of the lysine-bound Y110F structure with wild-type structures reveals that key structural changes due to lysine binding are absent in this mutant.

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Year:  2014        PMID: 25369463     DOI: 10.1021/bi5012157

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  3 in total

1.  Structure of the 4-hydroxy-tetrahydrodipicolinate synthase from the thermoacidophilic methanotroph Methylacidiphilum fumariolicum SolV and the phylogeny of the aminotransferase pathway.

Authors:  Rob A Schmitz; Andreas Dietl; Melanie Müller; Tom Berben; Huub J M Op den Camp; Thomas R M Barends
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2020-04-28       Impact factor: 1.056

2.  Structure of dihydrodipicolinate synthase from the commensal bacterium Bacteroides thetaiotaomicron at 2.1 Å resolution.

Authors:  Nicholas Mank; Amy Arnette; Vince Klapper; Lesa Offermann; Maksymilian Chruszcz
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-03-20       Impact factor: 1.056

3.  Kinetic, spectral, and structural studies of the slow-binding inhibition of the Escherichia coli dihydrodipicolinate synthase by 2, 4-oxo-pentanoic acid.

Authors:  William Karsten; Leonard M Thomas; Christian Fleming; Priscilla Seabourn; Christina Bruxvoort; Lilian Chooback
Journal:  Arch Biochem Biophys       Date:  2021-02-24       Impact factor: 4.013

  3 in total

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