Literature DB >> 25353842

Low-dimensional functionality of complex network dynamics: neurosensory integration in the Caenorhabditis Elegans connectome.

James Kunert1, Eli Shlizerman2, J Nathan Kutz2.   

Abstract

We develop a biophysical model of neurosensory integration in the model organism Caenorhabditis elegans. Building on experimental findings on the neuron conductances and their resolved connectome, we posit the first full dynamic model of the neural voltage excitations that allows for a characterization of network structures which link input stimuli to neural proxies of behavioral responses. Full connectome simulations of neural responses to prescribed inputs show that robust, low-dimensional bifurcation structures drive neural voltage activity modes. Comparison of these modes with experimental studies allows us to link these network structures to behavioral responses. Thus the underlying bifurcation structures discovered, i.e., induced Hopf bifurcations, are critical in explaining behavioral responses such as swimming and crawling.

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Year:  2014        PMID: 25353842     DOI: 10.1103/PhysRevE.89.052805

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  10 in total

1.  Unsupervised learning of control signals and their encodings in Caenorhabditis elegans whole-brain recordings.

Authors:  Charles Fieseler; Manuel Zimmer; J Nathan Kutz
Journal:  J R Soc Interface       Date:  2020-12-09       Impact factor: 4.118

2.  A quantitative model of conserved macroscopic dynamics predicts future motor commands.

Authors:  Connor Brennan; Alexander Proekt
Journal:  Elife       Date:  2019-07-11       Impact factor: 8.140

3.  Functional connectomics from neural dynamics: probabilistic graphical models for neuronal network of Caenorhabditis elegans.

Authors:  Hexuan Liu; Jimin Kim; Eli Shlizerman
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-09-10       Impact factor: 6.237

4.  A stochastic neuronal model predicts random search behaviors at multiple spatial scales in C. elegans.

Authors:  Steven B Augustine; Kristy J Lawton; Theodore H Lindsay; Tod R Thiele; William M Roberts; Eduardo J Izquierdo; Serge Faumont; Rebecca A Lindsay; Matthew Cale Britton; Navin Pokala; Cornelia I Bargmann; Shawn R Lockery
Journal:  Elife       Date:  2016-01-29       Impact factor: 8.140

5.  Nonlinear control of networked dynamical systems.

Authors:  Megan Morrison; J Nathan Kutz
Journal:  IEEE Trans Netw Sci Eng       Date:  2020-10-19

6.  Spatiotemporal Feedback and Network Structure Drive and Encode Caenorhabditis elegans Locomotion.

Authors:  James M Kunert; Joshua L Proctor; Steven L Brunton; J Nathan Kutz
Journal:  PLoS Comput Biol       Date:  2017-01-11       Impact factor: 4.475

7.  Multistability and Long-Timescale Transients Encoded by Network Structure in a Model of C. elegans Connectome Dynamics.

Authors:  James M Kunert-Graf; Eli Shlizerman; Andrew Walker; J Nathan Kutz
Journal:  Front Comput Neurosci       Date:  2017-06-13       Impact factor: 2.380

8.  Functionality and Robustness of Injured Connectomic Dynamics in C. elegans: Linking Behavioral Deficits to Neural Circuit Damage.

Authors:  James M Kunert; Pedro D Maia; J Nathan Kutz
Journal:  PLoS Comput Biol       Date:  2017-01-05       Impact factor: 4.475

9.  Systematic generation of biophysically detailed models with generalization capability for non-spiking neurons.

Authors:  Loïs Naudin; Juan Luis Jiménez Laredo; Qiang Liu; Nathalie Corson
Journal:  PLoS One       Date:  2022-05-13       Impact factor: 3.240

10.  Forward and backward locomotion patterns in C. elegans generated by a connectome-based model simulation.

Authors:  Kazuma Sakamoto; Zu Soh; Michiyo Suzuki; Yuichi Iino; Toshio Tsuji
Journal:  Sci Rep       Date:  2021-07-02       Impact factor: 4.379

  10 in total

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