Literature DB >> 25350875

Multi-tasking of biosynthetic and energetic functions of glycolysis explained by supply and demand logic.

Johan H van Heerden1, Frank J Bruggeman, Bas Teusink.   

Abstract

After more than a century of research on glycolysis, we have detailed descriptions of its molecular organization, but despite this wealth of knowledge, linking the enzyme properties to metabolic pathway behavior remains challenging. These challenges arise from multi-layered regulation and the context and time dependence of component functions. However, when viewed as a system that functions according to the principles of supply and demand, a simplifying theoretical framework can be applied to study its regulation logic and to assess the coherence of experimental interpretations. These principles are universally applicable, as they emphasize the common metabolic tasks of glycolysis: the provision of free-energy carriers, and precursors for biosynthesis and stress-related compounds. Here we will review the regulation of multi-tasking by glycolysis and consider how an understanding of this central metabolic pathway can be pursued using general principles, rather than focusing on the biochemical details of constituent components.
© 2015 WILEY Periodicals, Inc.

Keywords:  design principles; energy metabolism; glycolysis; regulation; supply and demand; systems biology

Mesh:

Substances:

Year:  2014        PMID: 25350875     DOI: 10.1002/bies.201400108

Source DB:  PubMed          Journal:  Bioessays        ISSN: 0265-9247            Impact factor:   4.345


  9 in total

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5.  Functional elucidation of the non-coding RNAs of Kluyveromyces marxianus in the exponential growth phase.

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Journal:  BMC Genomics       Date:  2016-02-29       Impact factor: 3.969

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7.  The Genetic Makeup and Expression of the Glycolytic and Fermentative Pathways Are Highly Conserved Within the Saccharomyces Genus.

Authors:  Francine J Boonekamp; Sofia Dashko; Marcel van den Broek; Thies Gehrmann; Jean-Marc Daran; Pascale Daran-Lapujade
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8.  An Improved ATP FRET Sensor For Yeast Shows Heterogeneity During Nutrient Transitions.

Authors:  Dennis Botman; Johan H van Heerden; Bas Teusink
Journal:  ACS Sens       Date:  2020-03-03       Impact factor: 7.711

9.  Selection for rapid uptake of scarce or fluctuating resource explains vulnerability of glycolysis to imbalance.

Authors:  Albertas Janulevicius; G Sander van Doorn
Journal:  PLoS Comput Biol       Date:  2021-01-19       Impact factor: 4.475

  9 in total

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