Literature DB >> 25349427

Inositol hexakisphosphate kinase-1 mediates assembly/disassembly of the CRL4-signalosome complex to regulate DNA repair and cell death.

Feng Rao1, Jing Xu1, A Basit Khan1, Moataz M Gadalla2, Jiyoung Y Cha1, Risheng Xu2, Richa Tyagi1, Yongjun Dang3, Anutosh Chakraborty1, Solomon H Snyder4.   

Abstract

Inositol polyphosphates containing an energetic pyrophosphate bond are formed primarily by a family of three inositol hexakisphosphate (IP6) kinases (IP6K1-3). The Cullin-RING ubiquitin ligases (CRLs) regulate diverse biological processes through substrate ubiquitylation. CRL4, comprising the scaffold Cullin 4A/B, the E2-interacting Roc1/2, and the adaptor protein damage-specific DNA-binding protein 1, is activated by DNA damage. Basal CRL4 activity is inhibited by binding to the COP9 signalosome (CSN). UV radiation and other stressors dissociate the complex, leading to E3 ligase activation, but signaling events that trigger signalosome dissociation from CRL4 have been unclear. In the present study, we show that, under basal conditions, IP6K1 forms a ternary complex with CSN and CRL4 in which IP6K1 and CRL4 are inactive. UV dissociates IP6K1 to generate IP7, which then dissociates CSN-CRL4 to activate CRL4. Thus, IP6K1 is a novel CRL4 subunit that transduces UV signals to mediate disassembly of the CRL4-CSN complex, thereby regulating nucleotide excision repair and cell death.

Entities:  

Keywords:  Cullin Ring E3 ligases; DNA repair; UV radiation; inositol phosphates; signalosome

Mesh:

Substances:

Year:  2014        PMID: 25349427      PMCID: PMC4234592          DOI: 10.1073/pnas.1417900111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  48 in total

1.  The molecular basis of CRL4DDB2/CSA ubiquitin ligase architecture, targeting, and activation.

Authors:  Eric S Fischer; Andrea Scrima; Kerstin Böhm; Syota Matsumoto; Gondichatnahalli M Lingaraju; Mahamadou Faty; Takeshi Yasuda; Simone Cavadini; Mitsuo Wakasugi; Fumio Hanaoka; Shigenori Iwai; Heinz Gut; Kaoru Sugasawa; Nicolas H Thomä
Journal:  Cell       Date:  2011-11-23       Impact factor: 41.582

2.  A family of diverse Cul4-Ddb1-interacting proteins includes Cdt2, which is required for S phase destruction of the replication factor Cdt1.

Authors:  Jianping Jin; Emily E Arias; Jing Chen; J Wade Harper; Johannes C Walter
Journal:  Mol Cell       Date:  2006-09-01       Impact factor: 17.970

3.  The E3 ubiquitin ligase Cullin 4A regulates meiotic progression in mouse spermatogenesis.

Authors:  Yan Yin; Congxing Lin; Sung Tae Kim; Ignasi Roig; Hong Chen; Liren Liu; George Michael Veith; Ramon U Jin; Scott Keeney; Maria Jasin; Kelle Moley; Pengbo Zhou; Liang Ma
Journal:  Dev Biol       Date:  2011-05-23       Impact factor: 3.582

Review 4.  New horizons in cellular regulation by inositol polyphosphates: insights from the pancreatic β-cell.

Authors:  Christopher J Barker; Per-Olof Berggren
Journal:  Pharmacol Rev       Date:  2013-02-19       Impact factor: 25.468

5.  WD40 protein FBW5 promotes ubiquitination of tumor suppressor TSC2 by DDB1-CUL4-ROC1 ligase.

Authors:  Jian Hu; Sima Zacharek; Yizhou Joseph He; Hyun Lee; Stuart Shumway; Robert J Duronio; Yue Xiong
Journal:  Genes Dev       Date:  2008-04-01       Impact factor: 11.361

6.  The ubiquitin ligase COP1 is a critical negative regulator of p53.

Authors:  David Dornan; Ingrid Wertz; Harumi Shimizu; David Arnott; Gretchen D Frantz; Patrick Dowd; Karen O'Rourke; Hartmut Koeppen; Vishva M Dixit
Journal:  Nature       Date:  2004-04-21       Impact factor: 49.962

Review 7.  Building and remodelling Cullin-RING E3 ubiquitin ligases.

Authors:  John R Lydeard; Brenda A Schulman; J Wade Harper
Journal:  EMBO Rep       Date:  2013-11-15       Impact factor: 8.807

8.  An inhibitor of NEDD8-activating enzyme as a new approach to treat cancer.

Authors:  Teresa A Soucy; Peter G Smith; Michael A Milhollen; Allison J Berger; James M Gavin; Sharmila Adhikari; James E Brownell; Kristine E Burke; David P Cardin; Stephen Critchley; Courtney A Cullis; Amanda Doucette; James J Garnsey; Jeffrey L Gaulin; Rachel E Gershman; Anna R Lublinsky; Alice McDonald; Hirotake Mizutani; Usha Narayanan; Edward J Olhava; Stephane Peluso; Mansoureh Rezaei; Michael D Sintchak; Tina Talreja; Michael P Thomas; Tary Traore; Stepan Vyskocil; Gabriel S Weatherhead; Jie Yu; Julie Zhang; Lawrence R Dick; Christopher F Claiborne; Mark Rolfe; Joseph B Bolen; Steven P Langston
Journal:  Nature       Date:  2009-04-09       Impact factor: 49.962

9.  Gene deletion of inositol hexakisphosphate kinase 1 reveals inositol pyrophosphate regulation of insulin secretion, growth, and spermiogenesis.

Authors:  Rashna Bhandari; Krishna R Juluri; Adam C Resnick; Solomon H Snyder
Journal:  Proc Natl Acad Sci U S A       Date:  2008-02-11       Impact factor: 11.205

10.  Functional organization of the S. cerevisiae phosphorylation network.

Authors:  Dorothea Fiedler; Hannes Braberg; Monika Mehta; Gal Chechik; Gerard Cagney; Paromita Mukherjee; Andrea C Silva; Michael Shales; Sean R Collins; Sake van Wageningen; Patrick Kemmeren; Frank C P Holstege; Jonathan S Weissman; Michael-Christopher Keogh; Daphne Koller; Kevan M Shokat; Nevan J Krogan
Journal:  Cell       Date:  2009-03-06       Impact factor: 41.582

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  24 in total

1.  Lentinula edodes Genome Survey and Postharvest Transcriptome Analysis.

Authors:  Yuichi Sakamoto; Keiko Nakade; Shiho Sato; Kentaro Yoshida; Kazuhiro Miyazaki; Satoshi Natsume; Naotake Konno
Journal:  Appl Environ Microbiol       Date:  2017-05-01       Impact factor: 4.792

2.  Suramin and NF449 are IP5K inhibitors that disrupt inositol hexakisphosphate-mediated regulation of cullin-RING ligase and sensitize cancer cells to MLN4924/pevonedistat.

Authors:  Xiaozhe Zhang; Shaodong Shi; Yang Su; Xiaoli Yang; Sining He; Xiuyan Yang; Jing Wu; Jian Zhang; Feng Rao
Journal:  J Biol Chem       Date:  2020-06-03       Impact factor: 5.157

3.  Profiling DNA damage-induced phosphorylation in budding yeast reveals diverse signaling networks.

Authors:  Chunshui Zhou; Andrew E H Elia; Maria L Naylor; Noah Dephoure; Bryan A Ballif; Gautam Goel; Qikai Xu; Aylwin Ng; Danny M Chou; Ramnik J Xavier; Steven P Gygi; Stephen J Elledge
Journal:  Proc Natl Acad Sci U S A       Date:  2016-06-13       Impact factor: 11.205

4.  Regulation of Cullin-RING E3 ligase dynamics by Inositol hexakisphosphate.

Authors:  Daniel C Scott; Gary Kleiger
Journal:  Proc Natl Acad Sci U S A       Date:  2020-03-10       Impact factor: 11.205

Review 5.  The inositol pyrophosphate pathway in health and diseases.

Authors:  Anutosh Chakraborty
Journal:  Biol Rev Camb Philos Soc       Date:  2017-12-27

Review 6.  Towards pharmacological intervention in inositol pyrophosphate signalling.

Authors:  Stephen B Shears
Journal:  Biochem Soc Trans       Date:  2016-02       Impact factor: 5.407

7.  5-IP7 is a GPCR messenger mediating neural control of synaptotagmin-dependent insulin exocytosis and glucose homeostasis.

Authors:  Xiaozhe Zhang; Na Li; Jun Zhang; Yanshen Zhang; Xiaoli Yang; Yifan Luo; Bobo Zhang; Zhixue Xu; Zhenhua Zhu; Xiuyan Yang; Yuan Yan; Biao Lin; Shen Wang; Da Chen; Caichao Ye; Yan Ding; Mingliang Lou; Qingcui Wu; Zhanfeng Hou; Keren Zhang; Ziming Liang; Anqi Wei; Bianbian Wang; Changhe Wang; Nan Jiang; Wenqing Zhang; Guozhi Xiao; Cong Ma; Yan Ren; Xiangbing Qi; Weiping Han; Chao Wang; Feng Rao
Journal:  Nat Metab       Date:  2021-10-18

Review 8.  The emerging roles of inositol pyrophosphates in eukaryotic cell physiology.

Authors:  Swarna Gowri Thota; Rashna Bhandari
Journal:  J Biosci       Date:  2015-09       Impact factor: 1.826

9.  Basis for metabolite-dependent Cullin-RING ligase deneddylation by the COP9 signalosome.

Authors:  Hong Lin; Xiaozhe Zhang; Li Liu; Qiuyu Fu; Chuanlong Zang; Yan Ding; Yang Su; Zhixue Xu; Sining He; Xiaoli Yang; Xiayun Wei; Haibin Mao; Yasong Cui; Yi Wei; Chuanzheng Zhou; Lilin Du; Niu Huang; Ning Zheng; Tao Wang; Feng Rao
Journal:  Proc Natl Acad Sci U S A       Date:  2020-02-11       Impact factor: 11.205

10.  Inositol hexakisphosphate (IP6) generated by IP5K mediates cullin-COP9 signalosome interactions and CRL function.

Authors:  Paul C Scherer; Yan Ding; Zhiqing Liu; Jing Xu; Haibin Mao; James C Barrow; Ning Wei; Ning Zheng; Solomon H Snyder; Feng Rao
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-14       Impact factor: 11.205

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