Literature DB >> 25343872

The integrated microbial genome resource of analysis.

Alice Checcucci1, Alessio Mengoni.   

Abstract

Integrated Microbial Genomes and Metagenomes (IMG) is a biocomputational system that allows to provide information and support for annotation and comparative analysis of microbial genomes and metagenomes. IMG has been developed by the US Department of Energy (DOE)-Joint Genome Institute (JGI). IMG platform contains both draft and complete genomes, sequenced by Joint Genome Institute and other public and available genomes. Genomes of strains belonging to Archaea, Bacteria, and Eukarya domains are present as well as those of viruses and plasmids. Here, we provide some essential features of IMG system and case study for pangenome analysis.

Entities:  

Mesh:

Year:  2015        PMID: 25343872     DOI: 10.1007/978-1-4939-1720-4_18

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  2 in total

1.  A Compendium of Bioinformatic Tools for Bacterial Pangenomics to Be Used by Wet-Lab Scientists.

Authors:  Camilla Fagorzi; Alice Checcucci
Journal:  Methods Mol Biol       Date:  2021

2.  High-quality draft genome sequences of five anaerobic oral bacteria and description of Peptoanaerobacter stomatis gen. nov., sp. nov., a new member of the family Peptostreptococcaceae.

Authors:  Maria V Sizova; Amanda Chilaka; Ashlee M Earl; Sebastian N Doerfert; Paul A Muller; Manolito Torralba; Jamison M McCorrison; A Scott Durkin; Karen E Nelson; Slava S Epstein
Journal:  Stand Genomic Sci       Date:  2015-07-18
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.