Literature DB >> 25342869

Separability tests for high-dimensional, low sample size multivariate repeated measures data.

Sean L Simpson1, Lloyd J Edwards2, Martin A Styner3, Keith E Muller4.   

Abstract

Longitudinal imaging studies have moved to the forefront of medical research due to their ability to characterize spatio-temporal features of biological structures across the lifespan. Valid inference in longitudinal imaging requires enough flexibility of the covariance model to allow reasonable fidelity to the true pattern. On the other hand, the existence of computable estimates demands a parsimonious parameterization of the covariance structure. Separable (Kronecker product) covariance models provide one such parameterization in which the spatial and temporal covariances are modeled separately. However, evaluating the validity of this parameterization in high-dimensions remains a challenge. Here we provide a scientifically informed approach to assessing the adequacy of separable (Kronecker product) covariance models when the number of observations is large relative to the number of independent sampling units (sample size). We address both the general case, in which unstructured matrices are considered for each covariance model, and the structured case, which assumes a particular structure for each model. For the structured case, we focus on the situation where the within subject correlation is believed to decrease exponentially in time and space as is common in longitudinal imaging studies. However, the provided framework equally applies to all covariance patterns used within the more general multivariate repeated measures context. Our approach provides useful guidance for high dimension, low sample size data that preclude using standard likelihood based tests. Longitudinal medical imaging data of caudate morphology in schizophrenia illustrates the approaches appeal.

Entities:  

Keywords:  Kronecker product; Likelihood ratio test; Linear exponent autoregressive model; Multivariate repeated measures; Separable Covariance; Spatio-temporal data

Year:  2014        PMID: 25342869      PMCID: PMC4203479          DOI: 10.1080/02664763.2014.919251

Source DB:  PubMed          Journal:  J Appl Stat        ISSN: 0266-4763            Impact factor:   1.404


  5 in total

1.  Spatiotemporal EEG/MEG source analysis based on a parametric noise covariance model.

Authors:  Hilde M Huizenga; Jan C de Munck; Lourens J Waldorp; Raoul P P P Grasman
Journal:  IEEE Trans Biomed Eng       Date:  2002-06       Impact factor: 4.538

2.  Avoiding bias in mixed model inference for fixed effects.

Authors:  Matthew J Gurka; Lloyd J Edwards; Keith E Muller
Journal:  Stat Med       Date:  2011-07-12       Impact factor: 2.373

3.  Statistical tests with accurate size and power for balanced linear mixed models.

Authors:  Keith E Muller; Lloyd J Edwards; Sean L Simpson; Douglas J Taylor
Journal:  Stat Med       Date:  2007-08-30       Impact factor: 2.373

4.  A linear exponent AR(1) family of correlation structures.

Authors:  Sean L Simpson; Lloyd J Edwards; Keith E Muller; Pranab K Sen; Martin A Styner
Journal:  Stat Med       Date:  2010-07-30       Impact factor: 2.373

5.  Kronecker product linear exponent AR(1) correlation structures for multivariate repeated measures.

Authors:  Sean L Simpson; Lloyd J Edwards; Martin A Styner; Keith E Muller
Journal:  PLoS One       Date:  2014-02-21       Impact factor: 3.240

  5 in total
  3 in total

1.  APPLYING A SPATIOTEMPORAL MODEL FOR LONGITUDINAL CARDIAC IMAGING DATA.

Authors:  Brandon George; Thomas Denney; Himanshu Gupta; Louis Dell'Italia; Inmaculada Aban
Journal:  Ann Appl Stat       Date:  2016-03-25       Impact factor: 2.083

2.  Selecting a separable parametric spatiotemporal covariance structure for longitudinal imaging data.

Authors:  Brandon George; Inmaculada Aban
Journal:  Stat Med       Date:  2014-10-08       Impact factor: 2.373

3.  A two-part mixed-effects modeling framework for analyzing whole-brain network data.

Authors:  Sean L Simpson; Paul J Laurienti
Journal:  Neuroimage       Date:  2015-03-19       Impact factor: 6.556

  3 in total

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