Literature DB >> 25335493

Expanding the mutational spectrum of LZTR1 in schwannomatosis.

Irene Paganini1, Vivian Y Chang2, Gabriele L Capone3, Jeremie Vitte4, Matteo Benelli5, Lorenzo Barbetti1, Roberta Sestini1, Eva Trevisson6, Theo Jm Hulsebos7, Marco Giovannini4, Stanley F Nelson8, Laura Papi1.   

Abstract

Schwannomatosis is characterized by the development of multiple non-vestibular, non-intradermal schwannomas. Constitutional inactivating variants in two genes, SMARCB1 and, very recently, LZTR1, have been reported. We performed exome sequencing of 13 schwannomatosis patients from 11 families without SMARCB1 deleterious variants. We identified four individuals with heterozygous loss-of-function variants in LZTR1. Sequencing of the germline of 60 additional patients identified 18 additional heterozygous variants in LZTR1. We identified LZTR1 variants in 43% and 30% of familial (three of the seven families) and sporadic patients, respectively. In addition, we tested LZTR1 protein immunostaining in 22 tumors from nine unrelated patients with and without LZTR1 deleterious variants. Tumors from individuals with LZTR1 variants lost the protein expression in at least a subset of tumor cells, consistent with a tumor suppressor mechanism. In conclusion, our study demonstrates that molecular analysis of LZTR1 may contribute to the molecular characterization of schwannomatosis patients, in addition to NF2 mutational analysis and the detection of chromosome 22 losses in tumor tissue. It will be especially useful in differentiating schwannomatosis from mosaic Neurofibromatosis type 2 (NF2). However, the role of LZTR1 in the pathogenesis of schwannomatosis needs further elucidation.

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Year:  2014        PMID: 25335493      PMCID: PMC4463507          DOI: 10.1038/ejhg.2014.220

Source DB:  PubMed          Journal:  Eur J Hum Genet        ISSN: 1018-4813            Impact factor:   4.246


  28 in total

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2.  MutationTaster evaluates disease-causing potential of sequence alterations.

Authors:  Jana Marie Schwarz; Christian Rödelsperger; Markus Schuelke; Dominik Seelow
Journal:  Nat Methods       Date:  2010-08       Impact factor: 28.547

Review 3.  High-resolution DNA melting analysis: advancements and limitations.

Authors:  Carl T Wittwer
Journal:  Hum Mutat       Date:  2009-06       Impact factor: 4.878

4.  Prediction of mutant mRNA splice isoforms by information theory-based exon definition.

Authors:  Eliseos J Mucaki; Ben C Shirley; Peter K Rogan
Journal:  Hum Mutat       Date:  2013-02-21       Impact factor: 4.878

5.  Rich annotation of DNA sequencing variants by leveraging the Ensembl Variant Effect Predictor with plugins.

Authors:  Michael Yourshaw; S Paige Taylor; Aliz R Rao; Martín G Martín; Stanley F Nelson
Journal:  Brief Bioinform       Date:  2014-03-12       Impact factor: 11.622

6.  Frequency of SMARCB1 mutations in familial and sporadic schwannomatosis.

Authors:  Miriam J Smith; Andrew J Wallace; Naomi L Bowers; Cecilie F Rustad; C Geoff Woods; Guy D Leschziner; Rosalie E Ferner; D Gareth R Evans
Journal:  Neurogenetics       Date:  2012-03-22       Impact factor: 2.660

7.  A new bioinformatics analysis tools framework at EMBL-EBI.

Authors:  Mickael Goujon; Hamish McWilliam; Weizhong Li; Franck Valentin; Silvano Squizzato; Juri Paern; Rodrigo Lopez
Journal:  Nucleic Acids Res       Date:  2010-05-03       Impact factor: 16.971

Review 8.  SWI/SNF chromatin-remodeling factors: multiscale analyses and diverse functions.

Authors:  Ghia Euskirchen; Raymond K Auerbach; Michael Snyder
Journal:  J Biol Chem       Date:  2012-09-05       Impact factor: 5.157

9.  Analysis Tool Web Services from the EMBL-EBI.

Authors:  Hamish McWilliam; Weizhong Li; Mahmut Uludag; Silvano Squizzato; Young Mi Park; Nicola Buso; Andrew Peter Cowley; Rodrigo Lopez
Journal:  Nucleic Acids Res       Date:  2013-05-13       Impact factor: 16.971

10.  The integrated landscape of driver genomic alterations in glioblastoma.

Authors:  Veronique Frattini; Vladimir Trifonov; Joseph Minhow Chan; Angelica Castano; Marie Lia; Francesco Abate; Stephen T Keir; Alan X Ji; Pietro Zoppoli; Francesco Niola; Carla Danussi; Igor Dolgalev; Paola Porrati; Serena Pellegatta; Adriana Heguy; Gaurav Gupta; David J Pisapia; Peter Canoll; Jeffrey N Bruce; Roger E McLendon; Hai Yan; Ken Aldape; Gaetano Finocchiaro; Tom Mikkelsen; Gilbert G Privé; Darell D Bigner; Anna Lasorella; Raul Rabadan; Antonio Iavarone
Journal:  Nat Genet       Date:  2013-08-05       Impact factor: 38.330

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  23 in total

1.  Targeted next-generation sequencing for differential diagnosis of neurofibromatosis type 2, schwannomatosis, and meningiomatosis.

Authors:  Camille Louvrier; Eric Pasmant; Audrey Briand-Suleau; Joëlle Cohen; Patrick Nitschké; Juliette Nectoux; Lucie Orhant; Cécile Zordan; Cyril Goizet; Stéphane Goutagny; Dominique Lallemand; Michel Vidaud; Dominique Vidaud; Michel Kalamarides; Béatrice Parfait
Journal:  Neuro Oncol       Date:  2018-06-18       Impact factor: 12.300

2.  A mosaic pattern of INI1/SMARCB1 protein expression distinguishes Schwannomatosis and NF2-associated peripheral schwannomas from solitary peripheral schwannomas and NF2-associated vestibular schwannomas.

Authors:  Rosario Caltabiano; Gaetano Magro; Agata Polizzi; Andrea Domenico Praticò; Andrea Ortensi; Valerio D'Orazi; Andrea Panunzi; Pietro Milone; Luigi Maiolino; Francesco Nicita; Gabriele Lorenzo Capone; Roberta Sestini; Irene Paganini; Mariella Muglia; Sebastiano Cavallaro; Salvatore Lanzafame; Laura Papi; Martino Ruggieri
Journal:  Childs Nerv Syst       Date:  2017-04-01       Impact factor: 1.475

Review 3.  Therapeutic advances for the tumors associated with neurofibromatosis type 1, type 2, and schwannomatosis.

Authors:  Jaishri O Blakeley; Scott R Plotkin
Journal:  Neuro Oncol       Date:  2016-02-06       Impact factor: 12.300

4.  Remodeling the cancer epigenome: mutations in the SWI/SNF complex offer new therapeutic opportunities.

Authors:  Krystal A Orlando; Vinh Nguyen; Jesse R Raab; Tara Walhart; Bernard E Weissman
Journal:  Expert Rev Anticancer Ther       Date:  2019-05-13       Impact factor: 4.512

5.  From process to progress-2017 International Conference on Neurofibromatosis 1, Neurofibromatosis 2 and Schwannomatosis.

Authors:  Rosalie E Ferner; Annette Bakker; Ype Elgersma; D Gareth R Evans; Marco Giovannini; Eric Legius; Alison Lloyd; Ludwine M Messiaen; Scott Plotkin; Karlyne M Reilly; Aaron Schindeler; Miriam J Smith; Nicole J Ullrich; Brigitte Widemann; Larry S Sherman
Journal:  Am J Med Genet A       Date:  2019-03-25       Impact factor: 2.802

6.  Mutations in LZTR1 drive human disease by dysregulating RAS ubiquitination.

Authors:  M Steklov; S Pandolfi; M F Baietti; A Batiuk; P Carai; P Najm; M Zhang; H Jang; F Renzi; Y Cai; L Abbasi Asbagh; T Pastor; M De Troyer; M Simicek; E Radaelli; H Brems; E Legius; J Tavernier; K Gevaert; F Impens; L Messiaen; R Nussinov; S Heymans; S Eyckerman; A A Sablina
Journal:  Science       Date:  2018-11-15       Impact factor: 47.728

7.  Phenotypic and genotypic overlap between mosaic NF2 and schwannomatosis in patients with multiple non-intradermal schwannomas.

Authors:  Hildegard Kehrer-Sawatzki; Lan Kluwe; Reinhard E Friedrich; Anna Summerer; Eleonora Schäfer; Ute Wahlländer; Cordula Matthies; Isabel Gugel; Said Farschtschi; Christian Hagel; David N Cooper; Victor-Felix Mautner
Journal:  Hum Genet       Date:  2018-07-13       Impact factor: 4.132

Review 8.  [Pathogenesis and molecular pathology of vestibular schwannoma].

Authors:  M Brodhun; V Stahn; A Harder
Journal:  HNO       Date:  2017-05       Impact factor: 1.284

9.  Delineation of LZTR1 mutation-positive patients with Noonan syndrome and identification of LZTR1 binding to RAF1-PPP1CB complexes.

Authors:  Ikumi Umeki; Tetsuya Niihori; Taiki Abe; Shin-Ichiro Kanno; Nobuhiko Okamoto; Seiji Mizuno; Kenji Kurosawa; Keisuke Nagasaki; Makoto Yoshida; Hirofumi Ohashi; Shin-Ichi Inoue; Yoichi Matsubara; Ikuma Fujiwara; Shigeo Kure; Yoko Aoki
Journal:  Hum Genet       Date:  2018-10-27       Impact factor: 4.132

10.  Multiparametric whole-body anatomic, functional, and metabolic imaging characteristics of peripheral lesions in patients with schwannomatosis.

Authors:  Shivani Ahlawat; Asad Baig; Jaishri O Blakeley; Michael A Jacobs; Laura M Fayad
Journal:  J Magn Reson Imaging       Date:  2016-03-17       Impact factor: 5.119

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