Literature DB >> 25333183

Robust cortical thickness measurement with LOGISMOS-B.

Ipek Oguz, Milan Sonka.   

Abstract

Cortical thickness (CT) is an important morphometric measure that has implications for psychiatric and neurologic processes. We propose a novel approach for automatically computing CT in an accurate and robust manner using LOGISMOS-B: Layered Optimal Graph Image Segmentation of Multiple Objects and Surfaces for the Brain. LOGISMOS-B is a cortical surface segmentation method based on LOGISMOS graph segmentation and generalized gradient vector flows. We evaluate our method on two different datasets (n = 83 total). The results show that LOGISMOS-B is more accurate than the popular FreeSurfer (FS) method and provides more reliable thickness measurements across a variety of challenging images. LOGISMOS-B accurately recovers known CT patterns, both across cortical lobes and locally, such as between the banks of the central sulcus, in healthy subjects and MS patients. Manual landmarks indicate a signed surface distance of 0.081 +/- 0.447mm for WM and 0.018 +/- 0.498mm for LOGISMOS-B, compared to 0.263 +/- 0.452mm for WM and -0.167 +/- 0.556mm for GM for FS, highlighting the surface placement accuracy of LOGISMOS-B. Finally, a regresion study shows that LOGISMOS-B provides strong correlation with age and plausible annual thinning rates across the cortex, with locally discerning thinning patterns, in agreement with the literature.

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Mesh:

Year:  2014        PMID: 25333183      PMCID: PMC4324754          DOI: 10.1007/978-3-319-10404-1_90

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  14 in total

1.  LOGISMOS--layered optimal graph image segmentation of multiple objects and surfaces: cartilage segmentation in the knee joint.

Authors:  Yin Yin; Xiangmin Zhang; Rachel Williams; Xiaodong Wu; Donald D Anderson; Milan Sonka
Journal:  IEEE Trans Med Imaging       Date:  2010-07-19       Impact factor: 10.048

2.  CRUISE: cortical reconstruction using implicit surface evolution.

Authors:  Xiao Han; Dzung L Pham; Duygu Tosun; Maryam E Rettmann; Chenyang Xu; Jerry L Prince
Journal:  Neuroimage       Date:  2004-11       Impact factor: 6.556

3.  Automated 3-D extraction and evaluation of the inner and outer cortical surfaces using a Laplacian map and partial volume effect classification.

Authors:  June Sic Kim; Vivek Singh; Jun Ki Lee; Jason Lerch; Yasser Ad-Dab'bagh; David MacDonald; Jong Min Lee; Sun I Kim; Alan C Evans
Journal:  Neuroimage       Date:  2005-08-01       Impact factor: 6.556

4.  Reconstruction of the human cerebral cortex robust to white matter lesions: method and validation.

Authors:  Navid Shiee; Pierre-Louis Bazin; Jennifer L Cuzzocreo; Chuyang Ye; Bhaskar Kishore; Aaron Carass; Peter A Calabresi; Daniel S Reich; Jerry L Prince; Dzung L Pham
Journal:  Hum Brain Mapp       Date:  2013-12-31       Impact factor: 5.038

5.  LOGISMOS-B: layered optimal graph image segmentation of multiple objects and surfaces for the brain.

Authors:  Ipek Oguz; Milan Sonka
Journal:  IEEE Trans Med Imaging       Date:  2014-02-07       Impact factor: 10.048

6.  A comparison of voxel and surface based cortical thickness estimation methods.

Authors:  Matthew J Clarkson; M Jorge Cardoso; Gerard R Ridgway; Marc Modat; Kelvin K Leung; Jonathan D Rohrer; Nick C Fox; Sébastien Ourselin
Journal:  Neuroimage       Date:  2011-05-26       Impact factor: 6.556

Review 7.  The adaptive brain: aging and neurocognitive scaffolding.

Authors:  Denise C Park; Patricia Reuter-Lorenz
Journal:  Annu Rev Psychol       Date:  2009       Impact factor: 24.137

8.  Focal thinning of the cerebral cortex in multiple sclerosis.

Authors:  Michael Sailer; Bruce Fischl; David Salat; Claus Tempelmann; Mircea Ariel Schönfeld; Evelina Busa; Nils Bodammer; Hans-Jochen Heinze; Anders Dale
Journal:  Brain       Date:  2003-06-04       Impact factor: 13.501

9.  A comparison between voxel-based cortical thickness and voxel-based morphometry in normal aging.

Authors:  Chloe Hutton; Bogdan Draganski; John Ashburner; Nikolaus Weiskopf
Journal:  Neuroimage       Date:  2009-06-25       Impact factor: 6.556

10.  Robust multi-site MR data processing: iterative optimization of bias correction, tissue classification, and registration.

Authors:  Eun Young Kim; Hans J Johnson
Journal:  Front Neuroinform       Date:  2013-11-18       Impact factor: 4.081

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  3 in total

1.  Machine learning in a graph framework for subcortical segmentation.

Authors:  Zhihui Guo; Satyananda Kashyap; Milan Sonka; Ipek Oguz
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2017-02-24

2.  LOGISMOS-B for Primates: Primate Cortical Surface Reconstruction and Thickness Measurement.

Authors:  Ipek Oguz; Martin Styner; Mar Sanchez; Yundi Shi; Milan Sonka
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2015

3.  Synthetic atrophy for longitudinal surface-based cortical thickness measurement.

Authors:  Kathleen E Larson; Ipek Oguz
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2021-02-15
  3 in total

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