Literature DB >> 25329275

The complete mitochondrial genome of Cheilinus undulates based on high-throughput sequencing technique.

Yulong Han1, Guohua Chen1, Jian Luo1, Xin Wen1, Wenshen Li1, Jun Wang1.   

Abstract

Cheilinus undulatus is a Critically Endangered ocean fish, which is also a higher level predator in coral reef. The complete mitochondrial genome of Cheilinus undulatus has been sequenced by high-throughput sequencing technology. According to the results, the mitochondrial genome of Cheilinus undulatus is 17,184 bp long and consists of 38 protein-coding genes, 2 rRNA genes, 22 tRNA genes and a control region. The nucleotides compositions of the light strand are 27.62% of A, 24.82% of T, 16.66% of G and 30.90% of C. With the exception of ND6 and 8 tRNA genes, all other mitochondrial genes are encoded on the heavy strand. C. undulates mitochondrial genome contains a 568 bp sequences that is a non-coding DNA domain. No homology sequence had been found through BLAST in GenBank. The sequences are probably characteristic species marker of C. undulates.

Entities:  

Keywords:  Cheilinus undulates; DNA marker; high-throughput sequencing; mitochondrial genome

Mesh:

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Year:  2014        PMID: 25329275     DOI: 10.3109/19401736.2014.971276

Source DB:  PubMed          Journal:  Mitochondrial DNA A DNA Mapp Seq Anal        ISSN: 2470-1394            Impact factor:   1.514


  2 in total

1.  Sequencing and characterization of the complete mitochondrial genome of Japanese Swellshark (Cephalloscyllium umbratile).

Authors:  Ke-Cheng Zhu; Yin-Yin Liang; Na Wu; Hua-Yang Guo; Nan Zhang; Shi-Gui Jiang; Dian-Chang Zhang
Journal:  Sci Rep       Date:  2017-11-10       Impact factor: 4.379

2.  Characterization of the complete mitochondrial genome sequence of orangeline wrasse Halichoeres hartzfeldii (Bleeker, 1852) with the phylogenetic relationships within the Labridae species.

Authors:  Hua-Yang Guo; Nan Zhang; Ke-Cheng Zhu; Bao-Suo Liu; Liang Guo; Jing-Wen Yang; Dian-Chang Zhang
Journal:  Mitochondrial DNA B Resour       Date:  2019-09-26       Impact factor: 0.658

  2 in total

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