Literature DB >> 25328133

The shades of gray of the chromatin fiber: recent literature provides new insights into the structure of chromatin.

Juan Ausió1.   

Abstract

The chromatin fiber consists of a string of nucleosomes connected by linker DNA regions. The hierarchy of folding of this fiber within the cell has long been controversial, and the existence of an originally described 30 nm fiber has been debated and reviewed extensively. This review contextualizes two recent papers on this topic that suggest the 30 nm fiber to be an over-simplification. The idealized model from the first study provides good insight into the constraints and histone participation in the maintenance of the fiber structure. The second paper provides a theoretical description of a more realistic view of the highly heterogeneous and dynamic chromatin organization in the in vivo setting. It is now time to abandon the highly regular "one start" solenoidal 30 nm structure and replace it with a more realistic highly dynamic, polymorphic fiber.
© 2015 WILEY Periodicals, Inc.

Keywords:  30 nm fiber; chromatin; nucleosomes

Mesh:

Substances:

Year:  2014        PMID: 25328133     DOI: 10.1002/bies.201400144

Source DB:  PubMed          Journal:  Bioessays        ISSN: 0265-9247            Impact factor:   4.345


  7 in total

1.  Chromatin, stacked at the centromere.

Authors:  Katrina V Good; Juan Ausió
Journal:  Nat Struct Mol Biol       Date:  2022-04       Impact factor: 15.369

2.  Modelling and DNA topology of compact 2-start and 1-start chromatin fibres.

Authors:  Chenyi Wu; Andrew Travers
Journal:  Nucleic Acids Res       Date:  2019-10-10       Impact factor: 16.971

3.  Interaction of chromatin with a histone H1 containing swapped N- and C-terminal domains.

Authors:  Jordana B Hutchinson; Manjinder S Cheema; Jason Wang; Krystal Missiaen; Ron Finn; Rodrigo Gonzalez Romero; John P H Th'ng; Michael Hendzel; Juan Ausió
Journal:  Biosci Rep       Date:  2015-04-27       Impact factor: 3.840

4.  Photobleaching studies reveal that a single amino acid polymorphism is responsible for the differential binding affinities of linker histone subtypes H1.1 and H1.5.

Authors:  Thomas W Flanagan; Jacob K Files; Kelsey Rose Casano; Eric M George; David T Brown
Journal:  Biol Open       Date:  2016-02-24       Impact factor: 2.422

Review 5.  On the role of inter-nucleosomal interactions and intrinsic nucleosome dynamics in chromatin function.

Authors:  Wladyslaw A Krajewski
Journal:  Biochem Biophys Rep       Date:  2016-02-16

6.  The Profile of Post-translational Modifications of Histone H1 in Chromatin of Mouse Embryonic Stem Cells.

Authors:  T Yu Starkova; T O Artamonova; V V Ermakova; E V Chikhirzhina; M A Khodorkovskii; A N Tomilin
Journal:  Acta Naturae       Date:  2019 Apr-Jun       Impact factor: 1.845

Review 7.  The Structural Determinants behind the Epigenetic Role of Histone Variants.

Authors:  Manjinder S Cheema; Juan Ausió
Journal:  Genes (Basel)       Date:  2015-07-23       Impact factor: 4.096

  7 in total

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