Literature DB >> 25325665

Thermodynamics of statistical inference by cells.

Alex H Lang1, Charles K Fisher1, Thierry Mora2, Pankaj Mehta1.   

Abstract

The deep connection between thermodynamics, computation, and information is now well established both theoretically and experimentally. Here, we extend these ideas to show that thermodynamics also places fundamental constraints on statistical estimation and learning. To do so, we investigate the constraints placed by (nonequilibrium) thermodynamics on the ability of biochemical signaling networks to estimate the concentration of an external signal. We show that accuracy is limited by energy consumption, suggesting that there are fundamental thermodynamic constraints on statistical inference.

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Year:  2014        PMID: 25325665     DOI: 10.1103/PhysRevLett.113.148103

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  11 in total

Review 1.  Information processing in bacteria: memory, computation, and statistical physics: a key issues review.

Authors:  Ganhui Lan; Yuhai Tu
Journal:  Rep Prog Phys       Date:  2016-04-08

2.  The thermodynamic uncertainty relation in biochemical oscillations.

Authors:  Robert Marsland; Wenping Cui; Jordan M Horowitz
Journal:  J R Soc Interface       Date:  2019-05-31       Impact factor: 4.118

3.  Thermodynamic Paradigm for Solution Demixing Inspired by Nuclear Transport in Living Cells.

Authors:  Ching-Hao Wang; Pankaj Mehta; Michael Elbaum
Journal:  Phys Rev Lett       Date:  2017-04-10       Impact factor: 9.161

4.  Thermodynamic constraints on the assembly and diversity of microbial ecosystems are different near to and far from equilibrium.

Authors:  Jacob Cook; Samraat Pawar; Robert G Endres
Journal:  PLoS Comput Biol       Date:  2021-12-03       Impact factor: 4.475

5.  Maxwell's demon in biochemical signal transduction with feedback loop.

Authors:  Sosuke Ito; Takahiro Sagawa
Journal:  Nat Commun       Date:  2015-06-23       Impact factor: 14.919

6.  Accurate encoding and decoding by single cells: amplitude versus frequency modulation.

Authors:  Gabriele Micali; Gerardo Aquino; David M Richards; Robert G Endres
Journal:  PLoS Comput Biol       Date:  2015-06-01       Impact factor: 4.475

7.  Identifying feasible operating regimes for early T-cell recognition: The speed, energy, accuracy trade-off in kinetic proofreading and adaptive sorting.

Authors:  Wenping Cui; Pankaj Mehta
Journal:  PLoS One       Date:  2018-08-16       Impact factor: 3.240

Review 8.  Fate of Duplicated Neural Structures.

Authors:  Luís F Seoane
Journal:  Entropy (Basel)       Date:  2020-08-25       Impact factor: 2.524

9.  The free energy cost of accurate biochemical oscillations.

Authors:  Yuansheng Cao; Hongli Wang; Qi Ouyang; Yuhai Tu
Journal:  Nat Phys       Date:  2015-07-27       Impact factor: 20.034

10.  Know the Single-Receptor Sensing Limit? Think Again.

Authors:  Gerardo Aquino; Ned S Wingreen; Robert G Endres
Journal:  J Stat Phys       Date:  2015-11-23       Impact factor: 1.548

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