Literature DB >> 25319677

Characterization of Alkaliphilus hydrothermalis sp. nov., a novel alkaliphilic anaerobic bacterium, isolated from a carbonaceous chimney of the Prony hydrothermal field, New Caledonia.

Fatma Ben Aissa1, Anne Postec, Gaël Erauso, Claude Payri, Bernard Pelletier, Moktar Hamdi, Marie-Laure Fardeau, Bernard Ollivier.   

Abstract

A novel anaerobic, alkaliphilic, Gram-positive staining bacterium was isolated from a hydrothermal chimney in the Prony Bay, New Caledonia. This strain designated FatMR1(T) grew at temperatures from 20 to 55 °C (optimum 37 °C) and at pH between 7.5 and 10.5 (optimum 8.8-9). NaCl is not required for growth (optimum 0.2-0.5%), but is tolerated up to 3%. Sulfate, thiosulfate, elemental sulfur, sulfite, nitrate and nitrite are not used as terminal electron acceptors. Strain FatMR1(T) fermented pyruvate, yeast extract, peptone and biotrypcase and used fructose as the only sugar. The main fermentation products from fructose and proteinaceous compounds (e.g. peptone and biotrypcase) were acetate, H2 and CO2. Crotonate was disproportionated to acetate and butyrate. The predominant cellular fatty acids were C14:0 and C16:0. The G + C content of the genomic DNA was 37.1 mol%. On the basis of phylogenetic, genetic, and physiological properties, strain FatMR1(T) (=DSM 25890(T), =JCM 18390(T)) belonging to the phylum Firmicutes, class Clostridia, order Clostridiales, is proposed as a novel species of the genus Alkaliphilus, A. hydrothermalis sp. nov.

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Year:  2014        PMID: 25319677     DOI: 10.1007/s00792-014-0697-y

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  23 in total

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Authors:  K Takai; D P Moser; T C Onstott; N Spoelstra; S M Pfiffner; A Dohnalkova; J K Fredrickson
Journal:  Int J Syst Evol Microbiol       Date:  2001-07       Impact factor: 2.747

2.  Archaea and bacteria with surprising microdiversity show shifts in dominance over 1,000-year time scales in hydrothermal chimneys.

Authors:  William J Brazelton; Kristin A Ludwig; Mitchell L Sogin; Ekaterina N Andreishcheva; Deborah S Kelley; Chuan-Chou Shen; R Lawrence Edwards; John A Baross
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-11       Impact factor: 11.205

3.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

4.  Thermoanaerobacter subterraneus sp. nov., a novel thermophile isolated from oilfield water.

Authors:  M L Fardeau; M Magot; B K Patel; P Thomas; J L Garcia; B Ollivier
Journal:  Int J Syst Evol Microbiol       Date:  2000-11       Impact factor: 2.747

5.  Studies on the spectrophotometric determination of DNA hybridization from renaturation rates.

Authors:  V A Huss; H Festl; K H Schleifer
Journal:  Syst Appl Microbiol       Date:  1983       Impact factor: 4.022

Review 6.  Methanogens: reevaluation of a unique biological group.

Authors:  W E Balch; G E Fox; L J Magrum; C R Woese; R S Wolfe
Journal:  Microbiol Rev       Date:  1979-06

7.  The quantitative measurement of DNA hybridization from renaturation rates.

Authors:  J De Ley; H Cattoir; A Reynaerts
Journal:  Eur J Biochem       Date:  1970-01

8.  Thermotoga hypogea sp. nov., a xylanolytic, thermophilic bacterium from an oil-producing well.

Authors:  M L Fardeau; B Ollivier; B K Patel; M Magot; P Thomas; A Rimbault; F Rocchiccioli; J L Garcia
Journal:  Int J Syst Bacteriol       Date:  1997-10

9.  Alkaliphilus crotonatoxidans sp. nov., a strictly anaerobic, crotonate-dismutating bacterium isolated from a methanogenic environment.

Authors:  Xianhua Cao; Xiaoli Liu; Xiuzhu Dong
Journal:  Int J Syst Evol Microbiol       Date:  2003-07       Impact factor: 2.747

10.  The phylogeny of the genus Clostridium: proposal of five new genera and eleven new species combinations.

Authors:  M D Collins; P A Lawson; A Willems; J J Cordoba; J Fernandez-Garayzabal; P Garcia; J Cai; H Hippe; J A Farrow
Journal:  Int J Syst Bacteriol       Date:  1994-10
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  8 in total

1.  List of new names and new combinations previously effectively, but not validly, published.

Authors:  Aharon Oren; George M Garrity
Journal:  Int J Syst Evol Microbiol       Date:  2017-11       Impact factor: 2.747

2.  Microbial diversity in a submarine carbonate edifice from the serpentinizing hydrothermal system of the Prony Bay (New Caledonia) over a 6-year period.

Authors:  Anne Postec; Marianne Quéméneur; Méline Bes; Nan Mei; Fatma Benaïssa; Claude Payri; Bernard Pelletier; Christophe Monnin; Linda Guentas-Dombrowsky; Bernard Ollivier; Emmanuelle Gérard; Céline Pisapia; Martine Gérard; Bénédicte Ménez; Gaël Erauso
Journal:  Front Microbiol       Date:  2015-08-27       Impact factor: 5.640

3.  Complete Genome Sequence of Alkaliphilus metalliredigens Strain QYMF, an Alkaliphilic and Metal-Reducing Bacterium Isolated from Borax-Contaminated Leachate Ponds.

Authors:  C Hwang; A Copeland; S Lucas; A Lapidus; K Barry; J C Detter; T Glavina Del Rio; N Hammon; S Israni; E Dalin; H Tice; S Pitluck; O Chertkov; T Brettin; D Bruce; C Han; J Schmutz; F Larimer; M L Land; L Hauser; N Kyrpides; N Mikhailova; Q Ye; J Zhou; P Richardson; M W Fields
Journal:  Genome Announc       Date:  2016-11-03

4.  Mineralizing Filamentous Bacteria from the Prony Bay Hydrothermal Field Give New Insights into the Functioning of Serpentinization-Based Subseafloor Ecosystems.

Authors:  Céline Pisapia; Emmanuelle Gérard; Martine Gérard; Léna Lecourt; Susan Q Lang; Bernard Pelletier; Claude E Payri; Christophe Monnin; Linda Guentas; Anne Postec; Marianne Quéméneur; Gaël Erauso; Bénédicte Ménez
Journal:  Front Microbiol       Date:  2017-01-31       Impact factor: 5.640

5.  Diversity of Rare and Abundant Prokaryotic Phylotypes in the Prony Hydrothermal Field and Comparison with Other Serpentinite-Hosted Ecosystems.

Authors:  Eléonore Frouin; Méline Bes; Bernard Ollivier; Marianne Quéméneur; Anne Postec; Didier Debroas; Fabrice Armougom; Gaël Erauso
Journal:  Front Microbiol       Date:  2018-02-06       Impact factor: 5.640

6.  Procaryotic Diversity and Hydrogenotrophic Methanogenesis in an Alkaline Spring (La Crouen, New Caledonia).

Authors:  Marianne Quéméneur; Nan Mei; Christophe Monnin; Anne Postec; Laura Wils; Manon Bartoli; Sophie Guasco; Bernard Pelletier; Gael Erauso
Journal:  Microorganisms       Date:  2021-06-23

7.  Metagenomic and PCR-Based Diversity Surveys of [FeFe]-Hydrogenases Combined with Isolation of Alkaliphilic Hydrogen-Producing Bacteria from the Serpentinite-Hosted Prony Hydrothermal Field, New Caledonia.

Authors:  Nan Mei; Anne Postec; Christophe Monnin; Bernard Pelletier; Claude E Payri; Bénédicte Ménez; Eléonore Frouin; Bernard Ollivier; Gaël Erauso; Marianne Quéméneur
Journal:  Front Microbiol       Date:  2016-08-30       Impact factor: 5.640

8.  Habitability of the marine serpentinite subsurface: a case study of the Lost City hydrothermal field.

Authors:  Susan Q Lang; William J Brazelton
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2020-01-06       Impact factor: 4.226

  8 in total

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