Literature DB >> 25319143

Synchrotron X-ray computed laminography of the three-dimensional anatomy of tomato leaves.

Pieter Verboven1, Els Herremans, Lukas Helfen, Quang T Ho, Metadel Abera, Tilo Baumbach, Martine Wevers, Bart M Nicolaï.   

Abstract

Synchrotron radiation computed laminography (SR-CL) is presented as an imaging method for analyzing the three-dimensional (3D) anatomy of leaves. The SR-CL method was used to provide 3D images of 1-mm² samples of intact leaves at a pixel resolution of 750 nm. The method allowed visualization and quantitative analysis of palisade and spongy mesophyll cells, and showed local venation patterns, aspects of xylem vascular structure and stomata. The method failed to image subcellular organelles such as chloroplasts. We constructed 3D computer models of leaves that can provide a basis for calculating gas exchange, light penetration and water and solute transport. The leaf anatomy of two different tomato genotypes grown in saturating light conditions was compared by 3D analysis. Differences were found in calculated values of tissue porosity, cell number density, cell area to volume ratio and cell volume and cell shape distributions of palisade and spongy cell layers. In contrast, the exposed cell area to leaf area ratio in mesophyll, a descriptor that correlates to the maximum rate of photosynthesis in saturated light conditions, was no different between spongy and palisade cells or between genotypes. The use of 3D image processing avoids many of the limitations of anatomical analysis with two-dimensional sections.
© 2014 The Authors The Plant Journal © 2014 John Wiley & Sons Ltd.

Entities:  

Keywords:  3D analysis; Solanum esculentum L; X-ray; gas exchange; leaf anatomy; technical advance

Mesh:

Year:  2014        PMID: 25319143     DOI: 10.1111/tpj.12701

Source DB:  PubMed          Journal:  Plant J        ISSN: 0960-7412            Impact factor:   6.417


  10 in total

1.  Automatic analysis of the 3-D microstructure of fruit parenchyma tissue using X-ray micro-CT explains differences in aeration.

Authors:  Els Herremans; Pieter Verboven; Bert E Verlinden; Dennis Cantre; Metadel Abera; Martine Wevers; Bart M Nicolaï
Journal:  BMC Plant Biol       Date:  2015-10-30       Impact factor: 4.215

2.  Macro optical projection tomography for large scale 3D imaging of plant structures and gene activity.

Authors:  Karen J I Lee; Grant M Calder; Christopher R Hindle; Jacob L Newman; Simon N Robinson; Jerome J H Y Avondo; Enrico S Coen
Journal:  J Exp Bot       Date:  2017-01-01       Impact factor: 6.992

3.  The Evolutionary Basis of Naturally Diverse Rice Leaves Anatomy.

Authors:  Jolly Chatterjee; Jacqueline Dionora; Abigail Elmido-Mabilangan; Samart Wanchana; Vivek Thakur; Anindya Bandyopadhyay; Darshan S Brar; William Paul Quick
Journal:  PLoS One       Date:  2016-10-28       Impact factor: 3.240

4.  In silico study of the role of cell growth factors in photosynthesis using a virtual leaf tissue generator coupled to a microscale photosynthesis gas exchange model.

Authors:  Moges A Retta; Metadel K Abera; Herman Nc Berghuijs; Pieter Verboven; Paul C Struik; Bart M Nicolaï
Journal:  J Exp Bot       Date:  2020-01-23       Impact factor: 6.992

Review 5.  Synchrotron tomography applications in agriculture and food sciences research: a review.

Authors:  Navnath S Indore; Chithra Karunakaran; Digvir S Jayas
Journal:  Plant Methods       Date:  2022-08-13       Impact factor: 5.827

6.  Spatial development of transport structures in apple (Malus × domestica Borkh.) fruit.

Authors:  Els Herremans; Pieter Verboven; Maarten L A T M Hertog; Dennis Cantre; Mattias van Dael; Thomas De Schryver; Luc Van Hoorebeke; Bart M Nicolaï
Journal:  Front Plant Sci       Date:  2015-09-01       Impact factor: 5.753

7.  Gene Expression and Silencing Studies in Phytophthora infestans Reveal Infection-Specific Nutrient Transporters and a Role for the Nitrate Reductase Pathway in Plant Pathogenesis.

Authors:  Melania Abrahamian; Audrey M V Ah-Fong; Carol Davis; Kalina Andreeva; Howard S Judelson
Journal:  PLoS Pathog       Date:  2016-12-09       Impact factor: 6.823

8.  Contrast-enhanced 3D micro-CT of plant tissues using different impregnation techniques.

Authors:  Zi Wang; Pieter Verboven; Bart Nicolai
Journal:  Plant Methods       Date:  2017-11-28       Impact factor: 4.993

9.  Electromigration Mechanism of Failure in Flip-Chip Solder Joints Based on Discrete Void Formation.

Authors:  Yuan-Wei Chang; Yin Cheng; Lukas Helfen; Feng Xu; Tian Tian; Mario Scheel; Marco Di Michiel; Chih Chen; King-Ning Tu; Tilo Baumbach
Journal:  Sci Rep       Date:  2017-12-20       Impact factor: 4.379

10.  Correlations between lignin content and structural robustness in plants revealed by X-ray ptychography.

Authors:  Carla C Polo; Luciano Pereira; Paulo Mazzafera; Denisele N A Flores-Borges; Juliana L S Mayer; Manuel Guizar-Sicairos; Mirko Holler; Mariane Barsi-Andreeta; Harry Westfahl; Florian Meneau
Journal:  Sci Rep       Date:  2020-04-07       Impact factor: 4.379

  10 in total

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