Literature DB >> 25312412

Global Hopf bifurcation in the ZIP regulatory system.

Juliane Claus1, Mariya Ptashnyk, Ansgar Bohmann, Andrés Chavarría-Krauser.   

Abstract

Regulation of zinc uptake in roots of Arabidopsis thaliana has recently been modeled by a system of ordinary differential equations based on the uptake of zinc, expression of a transporter protein and the interaction between an activator and inhibitor. For certain parameter choices the steady state of this model becomes unstable upon variation in the external zinc concentration. Numerical results show periodic orbits emerging between two critical values of the external zinc concentration. Here we show the existence of a global Hopf bifurcation with a continuous family of stable periodic orbits between two Hopf bifurcation points. The stability of the orbits in a neighborhood of the bifurcation points is analyzed by deriving the normal form, while the stability of the orbits in the global continuation is shown by calculation of the Floquet multipliers. From a biological point of view, stable periodic orbits lead to potentially toxic zinc peaks in plant cells. Buffering is believed to be an efficient way to deal with strong transient variations in zinc supply. We extend the model by a buffer reaction and analyze the stability of the steady state in dependence of the properties of this reaction. We find that a large enough equilibrium constant of the buffering reaction stabilizes the steady state and prevents the development of oscillations. Hence, our results suggest that buffering has a key role in the dynamics of zinc homeostasis in plant cells.

Entities:  

Mesh:

Substances:

Year:  2014        PMID: 25312412     DOI: 10.1007/s00285-014-0836-1

Source DB:  PubMed          Journal:  J Math Biol        ISSN: 0303-6812            Impact factor:   2.259


  11 in total

Review 1.  The ZIP family of metal transporters.

Authors:  M L Guerinot
Journal:  Biochim Biophys Acta       Date:  2000-05-01

Review 2.  Cellular mechanisms for heavy metal detoxification and tolerance.

Authors:  J L Hall
Journal:  J Exp Bot       Date:  2002-01       Impact factor: 6.992

3.  Systematic derivation of amplitude equations and normal forms for dynamical systems.

Authors:  M. Ipsen; F. Hynne; P. G. Sorensen
Journal:  Chaos       Date:  1998-12       Impact factor: 3.642

Review 4.  Regulation of the adaptation to zinc deficiency in plants.

Authors:  Ana G L Assunção; Henk Schat; Mark G M Aarts
Journal:  Plant Signal Behav       Date:  2010-12-01

5.  Genetically encoded sensors to elucidate spatial distribution of cellular zinc.

Authors:  Philip J Dittmer; Jose G Miranda; Jessica A Gorski; Amy E Palmer
Journal:  J Biol Chem       Date:  2009-04-10       Impact factor: 5.157

6.  Implications of a zinc uptake and transport model.

Authors:  Juliane Claus; Andrés Chavarría-Krauser
Journal:  Plant Signal Behav       Date:  2013-03-19

7.  Zinc-dependent global transcriptional control, transcriptional deregulation, and higher gene copy number for genes in metal homeostasis of the hyperaccumulator Arabidopsis halleri.

Authors:  Ina N Talke; Marc Hanikenne; Ute Krämer
Journal:  Plant Physiol       Date:  2006-07-14       Impact factor: 8.340

8.  Genetically encoded FRET sensors to monitor intracellular Zn2+ homeostasis.

Authors:  Jan L Vinkenborg; Tamara J Nicolson; Elisa A Bellomo; Melissa S Koay; Guy A Rutter; Maarten Merkx
Journal:  Nat Methods       Date:  2009-08-30       Impact factor: 28.547

9.  Identification of a family of zinc transporter genes from Arabidopsis that respond to zinc deficiency.

Authors:  N Grotz; T Fox; E Connolly; W Park; M L Guerinot; D Eide
Journal:  Proc Natl Acad Sci U S A       Date:  1998-06-09       Impact factor: 11.205

10.  Modeling regulation of zinc uptake via ZIP transporters in yeast and plant roots.

Authors:  Juliane Claus; Andrés Chavarría-Krauser
Journal:  PLoS One       Date:  2012-06-08       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.