CONSPECTUS: The human innate immune system has evolved the means to reduce the bioavailability of first-row late d-block transition metal ions to invading microbial pathogens in a process termed "nutritional immunity". Transition metals from Mn(II) to Zn(II) function as metalloenzyme cofactors in all living cells, and the successful pathogen is capable of mounting an adaptive response to mitigate the effects of host control of transition metal bioavailability. Emerging evidence suggests that Mn, Fe, and Zn are withheld from the pathogen in classically defined nutritional immunity, while Cu is used to kill invading microorganisms. This Account summarizes new molecular-level insights into copper trafficking across cell membranes from studies of a number of important bacterial pathogens and model organisms, including Escherichia coli, Salmonella species, Mycobacterium tuberculosis, and Streptococcus pneumoniae, to illustrate general principles of cellular copper resistance. Recent highlights of copper chemistry at the host-microbial pathogen interface include the first high resolution structures and functional characterization of a Cu(I)-effluxing P1B-ATPase, a new class of bacterial copper chaperone, a fungal Cu-only superoxide dismutase SOD5, and the discovery of a small molecule Cu-bound SOD mimetic. Successful harnessing by the pathogen of host-derived bactericidal Cu to reduce the bacterial load of reactive oxygen species (ROS) is an emerging theme; in addition, recent studies continue to emphasize the importance of short lifetime protein-protein interactions that orchestrate the channeling of Cu(I) from donor to target without dissociation into bulk solution; this, in turn, mitigates the off-pathway effects of Cu(I) toxicity in both the periplasm in Gram negative organisms and in the bacterial cytoplasm. It is unclear as yet, outside of the photosynthetic bacteria, whether Cu(I) is trafficked to other cellular destinations, for example, to cuproenzymes or other intracellular storage sites, or the general degree to which copper chaperones vs copper efflux transporters are essential for bacterial pathogenesis in the vertebrate host. Future studies will be directed toward the identification and structural characterization of other cellular targets of Cu(I) trafficking and resistance, the physical and mechanistic characterization of Cu(I)-transfer intermediates, and elucidation of the mutual dependence of Cu(I) trafficking and cellular redox status on thiol chemistry in the cytoplasm. Crippling bacterial control of Cu(I) sensing, trafficking, and efflux may represent a viable strategy for the development of new antibiotics.
CONSPECTUS: The human innate immune system has evolved the means to reduce the bioavailability of first-row late d-block transition metal ions to invading microbial pathogens in a process termed "nutritional immunity". Transition metals from Mn(II) to Zn(II) function as metalloenzyme cofactors in all living cells, and the successful pathogen is capable of mounting an adaptive response to mitigate the effects of host control of transition metal bioavailability. Emerging evidence suggests that Mn, Fe, and Zn are withheld from the pathogen in classically defined nutritional immunity, while Cu is used to kill invading microorganisms. This Account summarizes new molecular-level insights into copper trafficking across cell membranes from studies of a number of important bacterial pathogens and model organisms, including Escherichia coli, Salmonella species, Mycobacterium tuberculosis, and Streptococcus pneumoniae, to illustrate general principles of cellular copper resistance. Recent highlights of copper chemistry at the host-microbial pathogen interface include the first high resolution structures and functional characterization of a Cu(I)-effluxing P1B-ATPase, a new class of bacterial copper chaperone, a fungal Cu-only superoxide dismutase SOD5, and the discovery of a small molecule Cu-bound SOD mimetic. Successful harnessing by the pathogen of host-derived bactericidal Cu to reduce the bacterial load of reactive oxygen species (ROS) is an emerging theme; in addition, recent studies continue to emphasize the importance of short lifetime protein-protein interactions that orchestrate the channeling of Cu(I) from donor to target without dissociation into bulk solution; this, in turn, mitigates the off-pathway effects of Cu(I)toxicity in both the periplasm in Gram negative organisms and in the bacterial cytoplasm. It is unclear as yet, outside of the photosynthetic bacteria, whether Cu(I) is trafficked to other cellular destinations, for example, to cuproenzymes or other intracellular storage sites, or the general degree to which copper chaperones vs copper efflux transporters are essential for bacterial pathogenesis in the vertebrate host. Future studies will be directed toward the identification and structural characterization of other cellular targets of Cu(I) trafficking and resistance, the physical and mechanistic characterization of Cu(I)-transfer intermediates, and elucidation of the mutual dependence of Cu(I) trafficking and cellular redox status on thiol chemistry in the cytoplasm. Crippling bacterial control of Cu(I) sensing, trafficking, and efflux may represent a viable strategy for the development of new antibiotics.
Copper is an essential
transition metal found in all biological
systems. All organisms have developed sophisticated copper homeostasis
and resistance systems in order to maintain the normal cellular copper
supply to essential cuproenzymes while detoxifying excess copper.
Recent work suggests that host-derived copper is used as an antibacterial
weapon; thus both host and bacterial pathogens actively engage cellular
processes to manipulate copper levels at key sites during bacterial
infections (for recent reviews, see refs (1)–[3]). In this Account, we follow the flow of copper from the
extracellular space into human cellular cytosol to bacterial pathogens
inside human cells, with emphasis on recent developments in our understanding
of the molecular and mechanistic details that characterize the transport
of copper across biological membranes at the host–bacterial
pathogen interface.Copper in biological systems can exist in
either the reduced Cu(I)
(3d10) state or the oxidized Cu(II) (3d9) state.
The reduction potential of +150 mV of Cu(II)/Cu(I) ensures that Cu(I)
is the major oxidation state of copper in the reducing environment
of the cytosol (approximately −220 mV). Cu(I) is a soft acid,
while Cu(II) is a borderline acid;[4] as
such, first coordination shell ligands in copper-sensing or transporting
proteins are formed primarily by cysteine, methionine, and histidine
residues. Cu(I) is relatively unique in biology in that it adopts
thermodynamically stable complexes characterized by a low coordination
number (n) of 2–4. In contrast, Cu(II) adopts
higher coordination number complexes, with n = 4–6.
The ability of copper to cycle between two oxidation states superimposed
on the capacity to form thermodynamically stable yet ligand exchange
labile coordination complexes establishes the foundation for understanding
copper transport, sensing, trafficking, and utilization in biological
systems.Excess copper negatively impacts bacterial cell viability.
The
original mechanistic proposal that Cu(I) catalyzes production of hydroxyl
radical (OH•) from hydrogen peroxide (H2O2) via the Fenton reaction (Figure 1a), as firmly established for Fe(II) in the cytoplasm, seems increasingly
unlikely since low molecular weight thiols (LMWTs) such as glutathione
(GSH; Figure 1b) chelate free copper, rendering
it incapable of cycling between Cu(I) and Cu(II) states.[5] OH• damage is much more likely
to occur in the periplasm of Gram-negative bacteria or in the extracellular
space (Figure 2). More recent studies suggest
that solvent exposed iron–sulfur clusters in metalloenzymes
involved in branched-chain amino acid synthesis are primary targets
of coppertoxicity in Escherichia coli via Cu(I)-mediated
displacement of Fe(II).[6] Mis-metalation
and iron–sulfur cluster disassembly by Cu(I) in enzymes involved
in key metabolic processes including glucose catabolism and heme biosynthesis
have also been shown to occur in other bacteria.[7−9] More work needs
to be done to establish the generality of this mechanism of Cu(I)toxicity, particularly in those organisms that lack iron–sulfur
cluster proteins and in others, for example, lactic acid bacteria,
that produce considerable endogenous hydrogen peroxide under aerobic
conditions.[10]
Figure 1
(a) Fenton reaction;,
(b) chemical structure of reduced glutathione
(GSH), and (c) chemical structure of yersiniabactin (Ybt) from uropathogenic E. coli (UPEC)[22] and proposed
reaction mechanism for the Cu-dependent superoxide dismutase (SOD)
activity of Ybt.[23]
Figure 2
Pathways of copper transport, trafficking, sensing, and resistance
in several well-studied bacterial pathogens, including the Gram positive
pathogen S. pneumoniae, M. tuberculosis, and two similar Gram negative pathogens, E. coli and Salmonella spp., at the host–pathogen
interface. Inset (upper left), cartoon representation of a host macrophage
engulfing a bacterial pathogen, ultimately sequestered in an intracellular
phagolysosomal compartment. The red box highlights the plasma, phagolysosomal,
and outer/inner membranes of the bacterium (from left to right), expanded
in the main body of the figure. E. coli CueO, plasmid-encoded
PcoA, and mycobacterial MmcO[60] are multicopper
oxidases (MCOs).[2] Both MmcO and an outer
membrane channel MctB[20] are required for
mycobacterial copper resistance. CtpV is a copper exporting ATPase
that is required for full virulence of M. turberculosis in murine models of infection,[61] while
Msp is a porin on the outer membrane of M. tuberculosis.[27] Overexpression of Msp genes induces
copper stress in M. turberculosis, consistent with
a role in Cu uptake.[27] Representative metalloregulatory
proteins are also shown (right).[1,30,43,62]
(a) Fenton reaction;,
(b) chemical structure of reduced glutathione
(GSH), and (c) chemical structure of yersiniabactin (Ybt) from uropathogenic E. coli (UPEC)[22] and proposed
reaction mechanism for the Cu-dependent superoxide dismutase (SOD)
activity of Ybt.[23]Pathways of copper transport, trafficking, sensing, and resistance
in several well-studied bacterial pathogens, including the Gram positive
pathogen S. pneumoniae, M. tuberculosis, and two similar Gram negative pathogens, E. coli and Salmonella spp., at the host–pathogen
interface. Inset (upper left), cartoon representation of a host macrophage
engulfing a bacterial pathogen, ultimately sequestered in an intracellular
phagolysosomal compartment. The red box highlights the plasma, phagolysosomal,
and outer/inner membranes of the bacterium (from left to right), expanded
in the main body of the figure. E. coli CueO, plasmid-encoded
PcoA, and mycobacterial MmcO[60] are multicopper
oxidases (MCOs).[2] Both MmcO and an outer
membrane channel MctB[20] are required for
mycobacterial copper resistance. CtpV is a copper exporting ATPase
that is required for full virulence of M. turberculosis in murine models of infection,[61] while
Msp is a porin on the outer membrane of M. tuberculosis.[27] Overexpression of Msp genes induces
copper stress in M. turberculosis, consistent with
a role in Cu uptake.[27] Representative metalloregulatory
proteins are also shown (right).[1,30,43,62]
Uptake and Trafficking of Copper from Host to
Microbe
A cartoon representation of copper transport and
trafficking from
outside of the vertebrate host cell, for example, a macrophage, into
an engulfed bacterial cell is shown in Figure 2. In eukaryotes from yeast to mammals, the acquisition of cellular
copper requires a conserved plasma membrane-localized Cu(I) importer,
Ctr1 (Figure 2, left).[11] The copper trafficking hypothesis[12] posits
that free copper present in the cytosol is vanishingly low and that
Cu(I) must be shuttled to distinct cellular targets by dedicated Cu(I)
chaperones. The humanCu(I) chaperone Atox1 (Figure 2) is conserved from bacteria (denoted CopZ; vide infra) to man and is a small cytosolic protein with the ferredoxin-like
fold harboring a solvent-exposed CXXC motif that forms a bisthiolateCu(I) complex.[13] Atox1 is proposed to acquire
Cu(I) from the C-terminal domain of hCtr1 directly via a specific
protein–protein interaction[14] or
via a glutathione–Cu(I) complex intermediate.[15] It is unclear how cells ensure that Atox1 is capable of
sequestering all Cu(I) imported through hCtr1. A recent study reveals
that Atox1 is capable of binding to liposomes, a mimic of the plasma
membrane, via weak electrostatic interactions in vitro thereby reducing the dimensionality of the search along the inner
leaflet of the plasma membrane and facilitating Cu(I) loading.[16] Likewise a recently characterized bacterial
Cu(I) chaperone, CupA from Streptococcus pneumoniae, localizes to the plasma membrane via a single membrane-spanning
helix (Figure 2, top).[17]Under normal conditions, Atox1 transfers Cu(I) to the Cu(I)-transporting
P1B-type ATPases, ATP7A and ATP7B, primarily localized
in the trans-Golgi network (vide infra) to provide
for systemic copper supply and maturation of specific cuproproteins.
However, in phagocytic cells, Cu(I) accumulates in cytoplasmic vesicles
that partially fuse with the phagolysosome that ultimately transitions
into an antimicrobial compartment,[3,18] and there
is some evidence to suggest that this accumulation may be dependent
upon the trafficking of ATP7A specifically to the membranes of these
vesicles (Figure 2).[18] Indeed, copper resistance has been shown to be required for virulence
in two animal models of mycobacterial infection.[19,20]
Fate of Copper Accumulation in the Extracellular
Space
Accumulation of copper in the lumen of the phagolysosomal
compartment
represents the host’s attempt to exploit the bactericidal power
of free Cu as part of a toxic milieu characterized by an acidic pH,
reactive nitrogen species (RNS), for example, nitric oxide, reactive
oxygen species (ROS), including hydrogen peroxide and NADPH-oxidase
derived superoxide anion O2–•,
and reactive chlorine species (RCS), for example, hypochlorite (HOCl);
in addition, pathogen-requiring Fe is mobilized outside of this compartment.[21] Successful microbial
pathogens exploit at least two recently characterized strategies to
minimize the effects of coppertoxicity in this compartment before
Cu enters the bacterial cell (Figure 2).Uropathogenic E. coli (UPEC) synthesizes a siderophore
called yersiniabactin (Ybt) that binds Cu(II)[22] and catalyzes the dismutation of superoxide to H2O2 and O2 (Figure 1c); recent
work reveals that this activity bestows on UPEC a survival advantage
in phagosomes.[23] Similarly, the human fungal
pathogen Candida albicans expresses a novel SOD,
SOD5, that is now known to be representative of glycosylphosphatidylinositol
(GPI)-anchored, extracellular, monomeric Cu-only SODs that are homologous
to the classic cytosolic, dimeric Cu/Zn SOD1.[24] Unlike Cu/Zn SOD, SOD5 is secreted as a disulfide-oxidized apoprotein
that is readily metalated by the available extracellular copper and
thus does not seem to require a chaperone. This presumably rapid metalation
is facilitated by the relatively open and solvent exposed nature of
the Cu site (Figure 3).[24] Despite these structural differences, SOD5 catalyzes superoxide
dismutation with turnover kinetics that approach the diffusion limit,
like Cu/Zn SODs. Mycobacterium tuberculosis also
encodes a Cu-only SOD5 (SodC) of known structure,[25] and while there is some evidence that SodC is secreted
into the extracellular space, it is also associated with the cell
wall and membrane fractions where it functions extracytoplasmically
(Figure 2).[26]
Figure 3
Molecular structures
of (a) Cu(I)- and (b) Cu(II)-bound Candida albicans SOD5.[24]
Molecular structures
of (a) Cu(I)- and (b) Cu(II)-bound Candida albicans SOD5.[24]Extracellular copper not utilized for these processes ultimately
enters the bacterial cell, which for the Gram negative pathogens,
for example, E. coli and Salmonella spp. and the acid-fast bacterium M. tuberculosis, is the periplasm, while for Gram positive bacteria, including Enterococcus ssp., S. pneumoniae, and Bacillus spp., Cu(I) must cross the bacterial inner or plasma
membrane (Figure 2). Although a number of reports
document a specific copper uptake system in pathogenic bacteria either
into the periplasm[27] or across the plasma
membrane,[28] there is generally a lack of
specific uptake systems described for Cu(I)/Cu(II) outside of the
photosynthetic bacteria. This is consistent with the fact that the
predicted cuproproteome accounts for ≤0.3% of the proteome
in all of bacteria[29] and most cuproproteins
either localize to the periplasm in Gram negative bacteria or are
tethered to the plasma membrane, facing the extracellular space (Figure 2).Since cytoplasmic Cu(I) is far more toxic
than biologically useful,
there is a robust program of Cu(I) detection in the periplasm, for
example, by CusS, or sensing by Cu(I)-specific metalloregulatory proteins
in the cytoplasm (Figure 2, right),[30] examples of which are E. coli CueR and M. tuberculosis CsoR and RicR[19] (Figure 4). These Cu(I)
sensors increase the transcription of genes encoding for proteins
that allow an organism to resist the effects of copper stress. Resistance
proteins include cytoplasmic copper chelators like bacterial metallothionein
(MymT) in M. tuberculosis, copper chaperones that
operate in both the periplasm and the cytoplasm, multicopper oxidases
(MCOs) that oxidize Cu(I) to less toxic Cu(II), and Cu(I) efflux pumps
and outer membrane-localized channels that move copper across membranes
(Figure 2).
Figure 4
Molecular structures of two Cu(I)-specific
metalloregulatory proteins:
(a) Cu(I)-bound E. coli CueR;[62] (b) Cu(I)-bound CsoR from Geobacillus thermodenitrificans.[63] Subunits are differentially shaded
with the Cu(I) binding sites circled and expanded (right).
Molecular structures of two Cu(I)-specific
metalloregulatory proteins:
(a) Cu(I)-bound E. coli CueR;[62] (b) Cu(I)-bound CsoR from Geobacillus thermodenitrificans.[63] Subunits are differentially shaded
with the Cu(I) binding sites circled and expanded (right).
Copper Resistance Determinants
in the Periplasm
The periplasm in Gram negative bacteria
can be considered a true
subcellular compartment that minimizes the effects of cellular Cu(I)toxicity. Indeed, a number of copper-containing proteins in different
organisms are found in this compartment, all of which have evolved
the capacity to bind Cu(I), Cu(II), or both with high affinity and
globally function as Cu trafficking proteins. These include E. coli CusF, Salmonella enterica serovar typhimurium CueP, and E. coli PcoC/Pseudomonas CopC (Figure 5).[2] Each has a distinct role in Cu homeostasis, however,
and there has been significant recent work on how these proteins acquire
and traffic Cu.
Figure 5
Molecular structures of selected periplasmic copper homeostasis
proteins: (a) Cu(I)-bound E. coli CusF;[34] (b) Cu(I)/Cu(II) bound CopC.[64]
Molecular structures of selected periplasmic copper homeostasis
proteins: (a) Cu(I)-bound E. coli CusF;[34] (b) Cu(I)/Cu(II) bound CopC.[64]CusCBA is representative of large
proton antiporters derived from
the resistance–nodulation–cell division (RND)/heavymetal efflux (HME) superfamily. It consists of the transmembrane efflux
pump CusA, a periplasmic membrane fusion protein CusB, and an outer
membrane β-barrel CusC, conforming to a 3:6:3 CusA/CusB/CusC
complex with pseudo- 3-fold rotational symmetry.[31] The crystal structures of all components of the CusCBA
complex are now known, and its structure and mechanism have recently
been reviewed in detail.[31,32]E. coli CusF is a Cu(I) binding protein that adopts
an oligonucleotide/oligosaccharide-binding (OB)-fold (Figure 5a) whose genetic deletion results in a copper sensitivity
phenotype.[33] Structural and spectroscopic
studies on Cu(I)–CusF reveal a methionine-rich Met2-HisCu(I) coordination complex that is capped by a cation−π
interaction with a nearby tryptophan.[34] CusF is a bona fide periplasmic metallochaperone
as documented by X-ray absorption spectroscopy (XAS), where the distinct
Cu(I) EXAFS signatures of the Met2-His site of CusF and
Met3 site of the N-terminal region of the CusB were exploited
to uncover an equimolar distribution of Cu(I) between CusF and CusB,
suggesting that these two sites have similar Cu(I) affinities.[35] These two proteins interact, and direct Cu(I)
transfer is proposed to be dependent on an interaction between the
N-terminal region of CusB and CusF.[36] Metalated
CusF has also been shown to deliver copper to CusB in the context
of CusCBA through a specific protein–protein interaction.[36] Although in vitro measurements
suggest that Cu(I) transfer or equilibration is bidirectional, this
equilibrium would likely be shifted by active translocation of Cu(I)
by CusCBA antiporter with the net flow of Cu(I) toward the extracellular
space (Figure 2).[35] A more recent trielement XAS study exploiting protein-specific selenomethione
labeling and Se, Ag, and Cu XAS further clarifies the role of CusB
and suggests that Cu(I)–CusB activates Cu(I) transfer from
CusF to CusA into a novel S2(O/N) Cu(I) site formed by
two methionines and one glutamate.[37] CusA,
CusB, and CusF continue the theme of Met-rich Cu(I) coordination complexes
in the more oxidizing periplasm because they are less susceptible
to oxidation than the cysteine-rich coordination sites that dominate
in the cytoplasm.[38]Since CusF is
a soluble periplasmic protein and cells may want
to restrict the concentrations of toxic Cu(I) in this compartment,
how CusF is metalated for delivery to the CusCBA antiporter is an
important question. Recent experiments in E. coli suggest that CusF is efficiently Cu(I) loaded through a physical
interaction with the cytoplasmic membrane copper exporting P1B-type ATPase CopA. Cu(I) transfer from CopA to CusF has been shown
to be unidirectional and dependent upon ATP hydrolysis by the transporter[39] and appears to require a specific, cognate CopA–CusF
interaction from the same bacterial species. Immunoprecipitation experiments
suggest an interaction between CopA in the E1·Cu(I) state (vide infra) and apo-CusF that is fully consistent with a
model of Cu(I) trafficking to CusF during a productive CopA ATPase
cycle.[39] Although many questions remain,
for example, what drives dissociation of Cu(I)–CusF from the
transporter, as well as a full accounting of the relative rates at
which Cu(I) is loaded onto CusF by CopA vs “free” Cu(I),
this is an exciting finding that suggests that periplasmic domains
of P1B-type ATPases may have evolved specific interaction
surfaces to allow for “channeling” of copper once it
is removed from the cytoplasm (Figure 2).Salmonella enterica serovar typhimurium (S. typhimurium), a Gram negative rod-shaped bacterium,
has evolved to survive in the phagolysosomes of macrophages (Figure 2) and has served as a model organism alongside the
closely related E. coli for understanding copper
sensing and resistance in this cellular compartment. However, S. typhimurium differs from E. coli in
that it does not encode a CusCBFA system but instead encodes CueP
as a major copper resistance protein; in fact, this dichotomy of Cu(I)-resistance
function is preserved in all Gram negative bacteria: they harbor either
the cus system under the control of CusRS[40] or a CueR-regulated cueP locus.[41] Although Cavet and co-workers originally identified
CueP as a major Cu binding protein in copper-stressed cells,[42] recent work defines the Cu stoichiometry as
1:1 and provides genetic and biochemical evidence that Cu–CueP,
like CusF in E. coli, obtains Cu(I) directly from
one of the two encoded P1B ATPases (CopA, GolT) and functions
as a Cu(I) chaperone for the periplasmic superoxide dismutase SodCII
at low [Cu][43] (Figure 2). Although many details of this exciting finding remain to
be elucidated, it provides additional evidence that Cu(I) is trafficked
from a cytoplasmic Cu(I) effluxer to a specific destination in the
periplasm, not only mitigating the effects of cytoplasmic Cu(I)toxicity
but also using the copper to reduce superoxide loads in this compartment,
with clear parallels to Ybt in UPEC.
Copper
Resistance Determinants in the Cytoplasm
Copper chaperones
are found in all kingdoms of life and function
as high affinity Cu(I) binding proteins that deliver their cargo to
specific molecular targets. Solution NMR structures of two bacterial
Cu(I) chaperones, Enterococcus CopZ and Bacillus
subtilis CopZ, and crystallographic studies of S.
cerevisiae Atx1 and humanAtox1 in either apo-reduced, apo-oxidized
or variously metallated states all reveal the same mixed α/β
ferrodoxin-like fold with a solvent-exposed CXXC Cu(I) binding motif
(Figure 6a).[13] CopZ
and related proteins, for example, cyanobacterial Atx1 (scAtx1),[13] form two- or three-coordinate Cu(I) complexes
that exploit the low coordination number and ligand exchange properties
of Cu(I) to transiently form metal-cross-linked intermediates, facilitating
Cu(I) transfer without dissociation into bulk solvent. However, recent
work reveals that an obligatory requirement for a CopZ-like chaperone
to deliver Cu(I) to its major target in bacteria, the Cu(I)-exporting
P1B-type ATPases,[44] is not fully
consistent with the data,[45] a finding compatible
with the idea that not all bacteria encode a known Cu(I) chaperone,
for example, E. coli and M. tuberculosis (Figure 2), and genetic deletion of the chaperone
often has little impact on cellular copper resistance or copper allocation.[45−47] Rather, bacterial CopZ-like Cu(I) chaperones play principal roles
in buffering low levels of Cu(I) thereby minimizing the deleterious
off-pathway impact of free Cu(I) on other metal homeostasis systems
in the cell.[45]
Figure 6
Molecular structures
of two cytoplasmic Cu(I) chaperones and the
apo-structure of the Cu(I)-effluxing P1B-type ATPase CopA
from L. pneumophila. (a) B. subtilis CopZ, representative of the Atox1-like ferredoxin-like fold metallochaperones.
The S–Cu–S bond angle of 120° suggests a third
ligand from solvent to complete a trigonal coordination structure.[13] (b) The Cu(I) chaperone CupA from S.
pneumoniae that harbors a binuclear Cu(I) center.[17] (c) L. pneumophila CopA with
the proposed copper entry, transmembrane (TM-MBS), and exit sites
indicated.[50,51] The MA and MB helices are shaded
cyan, with the actuator (A, green), nucleotide-binding (N, red) and
phosphorylated (P, blue) domains also highlighted.[50]
Molecular structures
of two cytoplasmic Cu(I) chaperones and the
apo-structure of the Cu(I)-effluxing P1B-type ATPase CopA
from L. pneumophila. (a) B. subtilisCopZ, representative of the Atox1-like ferredoxin-like fold metallochaperones.
The S–Cu–S bond angle of 120° suggests a third
ligand from solvent to complete a trigonal coordination structure.[13] (b) The Cu(I) chaperone CupA from S.
pneumoniae that harbors a binuclear Cu(I) center.[17] (c) L. pneumophila CopA with
the proposed copper entry, transmembrane (TM-MBS), and exit sites
indicated.[50,51] The MA and MB helices are shaded
cyan, with the actuator (A, green), nucleotide-binding (N, red) and
phosphorylated (P, blue) domains also highlighted.[50]A new structural class of bacterial
Cu(I) chaperones, exemplified
by S. pneumoniaeCupA (Figure 6b), is distributed widely among lactobacilli and streptococci that
lack a CopZ-like metallochaperone.[17] CupA
expression is induced in the lungs and nasopharynx of intranasally
infected mice[48] and, unlike other CopZs,
is essential for cellular Cu resistance under conditions of Cu stress
in liquid culture. The core domain of CupA is homologous to the N-terminal
metal binding domain (MBD) of S. pneumoniae CopA,
a conserved feature of other cognate chaperone–CopAMBD pairs.[13] The crystal structures of the
soluble Cu(I)-bound CupA (sCupA) and CopAMBD reveal isostructural
cupredoxin-like folds, each harboring a binuclear Cu(I) cluster unprecedented
in bacterial copper trafficking. NMR studies are consistent with unidirectional
Cu(I) transfer from the low-affinity site (S2) on sCupA to the high-affinity
site (S1) of CopAMBD down a thermodynamic gradient (Figure 6b). CupA localizes to the plasma membrane via a
single-pass N-terminal transmembrane (TM) helix, and a Cu(I)-binding
competent, membrane-localized CupA is obligatory for cellular copper
resistance.[17]Although much of the
structural work in bacterial systems has focused
on the molecular details of Cu(I) transfer from the chaperone to the
CopAMBD,[49] recent evidence,
at least for Archaeoglobus fulgidus (Af) CopA, suggests that this transfer is not on pathway for Cu(I) efflux,
but instead plays a regulatory role in allosteric activation of CopA.
The first crystallographic structure of a bacterial CopA, from Legionella pneumophila (Lp), in the metal-free
apo state[50] reveals a core structure of
six transmembrane helices, M1–M6, flanked by two CopA-unique
N-terminal helices, MA and MB, and the typical P-type ATPase actuator
(A), nucleotide binding (N), and phosphorylation (P) domains (Figure 6c). The N-terminal MBD, adjacent to the MA helix,
was not resolved in this structure. The general mechanism for the
P-type ATPase catalytic cycle is based on the Albers–Post model
(Figure 7).[51] Briefly,
the E1·ATP state binds substrate Cu(I) to the transmembrane metal
binding sites harboring the core CPC motif in TM4 (TM-MBS; Figure 6c), activating ATP hydrolysis to generate an Asp–phosphoryl
intermediate E1·P (D426 in Lp CopA). This drives
a conformational change that allows TM-MBS-bound Cu(I) ions to move
to an “exit” site to form the E2·P state, from
which Cu(I) is released into the extracellular space. Hydrolysis and
release of inorganicphosphate forms the E2 state, which is recycled
to the E1·ATP state upon ATP binding.[51]
Figure 7
Cartoon
of a mechanistic model of Cu(I) efflux across the bacterial
inner membrane that summarizes recent structural and biochemical studies
on CopA from E. coli, A. fulgidus and L. pneumophila. CopA is postulated to transport
two Cu(I) ions per ATPase cycle. E. coli CusF has
been shown to be metalated upon Cu(I) release from CopA through a
protein–protein interaction.[39]
Cartoon
of a mechanistic model of Cu(I) efflux across the bacterial
inner membrane that summarizes recent structural and biochemical studies
on CopA from E. coli, A. fulgidus and L. pneumophila. CopA is postulated to transport
two Cu(I) ions per ATPase cycle. E. coli CusF has
been shown to be metalated upon Cu(I) release from CopA through a
protein–protein interaction.[39]The structure of Lp CopA coupled with biochemical
and molecular dynamics experiments in Af and Lp CopAs provide support for a continuous Cu(I) translocation
pathway through the membrane involving three spatially resolved Cu(I)
binding sites, termed entry, transmembrane (TM-MBS), and exit (Figure 6c). The entry site (M148, E205, and D337; Figure 6c) is buttressed by a cluster of positively charged
residues, which constitute a “platform” helix as part
of the kinked MB helix. The integrity of the entry site and the positive
charge of the platform helix has now been experimentally validated
in Af CopA,[52] but only
if Cu(I) bound to AfCopZ and not free Cu(I) was
used to measure Cu(I)-stimulated CopA ATPase activity. This finding
is consistent, albeit not confirmatory, of a transient and direct
physical interaction between the cognate chaperone and the “throat”
of the pump (Figure 6c) via electrostatic complementarity.
Given the high Cu(I) binding affinity of CopZ, Cu(I) is postulated
to move from the chaperone to the entry site via ligand exchange.[13] However, a Cu(I)-trapped CopZ–CopA complex,
as a presumed intermediate on the Cu(I)-transfer pathway, has not
yet been characterized; in addition, given two major classes of bacterial
copper chaperones, it will be interesting to assess the molecular
specificity of this entry-site mediated Cu(I)-transfer process.Cu(I) bound to the entry site is proposed to be transient[50,51] and must move to the TM-MBS sites. The TM-MBSs in Af CopA characterized by XAS revealed two spectroscopically distinct
Cu(I) sites involving six ligands (Figure 6c); these findings played a crucial role in identifying candidate
Cu(I) ligands in the apo-Lp CopA structure.[53] Molecular dynamics simulations of Lp CopA suggest that TM-MBS site I, formed by the two cysteines of
the CPC motif and a tyrosine from the conserved IYNV motif in M5 (Figure 6c), is likely more
important in transporting Cu(I).[51] Finally,
the femtomolar affinity of the TM-MBSs for Cu(I) poses an energetic
barrier for Cu(I) release into the extracellular bulk solvent;[53] this led to the proposal of a Cu(I) exit site
involving conserved glutamate and methionine residues (Figure 6c). Simulations reveal that solvent can enter the
TM region from the periplasmic side and reach Glu189 in the proposed
exit site; furthermore, this solvent filled pathway is predicted to
be wide enough for Cu(I) to be shuttled from the TM-MBS to the exit
site with particularly important roles proposed for Cys382 and Met717
in this process (Figure 6c). Mutagenesis experiments
in Lp CopA are consistent with the functional importance
of the exit site, in terms of both ATP hydrolysis and cellular copper
resistance.
Conclusion and Perspectives
This Account
summarizes our increasingly sophisticated understanding
of copper transport and trafficking in bacteria and how human macrophages
exploit excess copper to poison invading pathogens. While this process
of Cu-mediated killing is opposite to that of “nutritional
immunity” in which the host attempts to withhold essential
transition metal ions from the pathogen,[54] both strategies reflect host efforts to manipulate metal bioavailability
to eliminate bacterial infections. An ongoing area of investigation
is the degree to which Cu(I)toxicity is linked to Cu(I)-induced dissociation
of cognate metals ions from metalloenzymes harboring cofactors composed
of poorly competitive metals, for example, Mn(II) and Fe(II), as well
as the interplay between copper homeostasis and cellular redox maintenance
systems, which are intrinsically linked by sulfur chemistry.[55,56] Glutathione and perhaps other related LMWTs in bacterial pathogens
that lack glutathione, for example, bacillithiol and mycothiol in S. aureus and M. tuberculosis, respectively,
must help to buffer “free” Cu(I) to very low levels
given its high affinity for Cu(I),[57] since
in some[45] but not all[58] cases, crippling glutathione biosynthesis is synergistic
with the deletion of the copper chaperone with respect to Cu(I) stress
resistance. Likewise, in S. pneumoniae, abrogation
of the ability to uptake glutathione (Spn does not
biosynthesize GSH) gives rise to a severe growth defect under copper
stress.[59] These studies thus generally
link the redox status of the cytoplasmic compartment as defined by
the GSH/GSSG couple to copper homeostasis and resistance.[56]Further, because the reduced cysteines
in Atox1 are responsible
for coordinating Cu(I), the redox state of those cysteines is also
maintained through equilibrium with the GSH/GSSG pair in human cells.[55] Atox1, in turn, may functionally replace GSH
under conditions of low total glutathione, consistent with the original
functional description of Atox1 as an antioxidant protein.[55] Further, humanglutaredoxin 1 (hGrx1) has been
shown to catalyze the interchange between disulfide-oxidized and reduced
Atox1 as a function of the GSH/GSSG ratio.[56]In vitro experiments also demonstrate that hGrx1
binds Cu(I) with high affinity, indicating a potential role in Cu(I)
buffering.[56] The dual roles of GSH, Atox1,
and Grx1 in cellular redox and copper homeostasis strongly suggest
a functional linkage between these two systems. Future studies that
define the chemical and physical origins of this linkage and, more
generally, how copper stress impacts other kinds of thiol chemistry
that might be manifest in a typical antimicrobial host response, promises
new surprises at the host–pathogen interface.
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