Literature DB >> 25309292

Crystal structure of cis-1-(2-methyl-1,2,3,4-tetra-hydro-quinolin-4-yl)azepan-2-one.

P S Pradeep1, S Naveen2, M N Kumara3, K M Mahadevan1, N K Lokanath4.   

Abstract

In the title compound, C16H22N2O, the azepan-2-one ring adopts a chair conformation, while the 1,2,3,4-tetra-hydro-pyridine ring adopts a half-chair conformation. In the crystal, mol-ecules are linked by N-H⋯O hydrogen bonds, forming supra-molecular chains propagated along [10-1], with weak C-H⋯O inter-actions occurring between the chains.

Entities:  

Keywords:  azepan-2-one; crystal structure; hydrogen bonding; tetra­hydro­quinolines

Year:  2014        PMID: 25309292      PMCID: PMC4186183          DOI: 10.1107/S1600536814017826

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of tetra­hydro­quinolines, see: Konishi et al. (1990 ▶).

Experimental

Crystal data

C16H22N2O M = 258.36 Monoclinic, a = 9.1640 (17) Å b = 13.1687 (18) Å c = 11.988 (2) Å β = 96.825 (11)° V = 1436.4 (4) Å3 Z = 4 Cu Kα radiation μ = 0.59 mm−1 T = 296 K 0.23 × 0.22 × 0.21 mm

Data collection

Bruker X8 Proteum diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2013 ▶) T min = 0.874, T max = 0.884 7903 measured reflections 2343 independent reflections 2106 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.049 wR(F 2) = 0.139 S = 1.06 2343 reflections 173 parameters H-atom parameters constrained Δρmax = 0.34 e Å−3 Δρmin = −0.36 e Å−3

Data collection: APEX2 (Bruker, 2013 ▶); cell refinement: SAINT (Bruker, 2013 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: Mercury. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536814017826/xu5808sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814017826/xu5808Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814017826/xu5808Isup3.cml Click here for additional data file. . DOI: 10.1107/S1600536814017826/xu5808fig1.tif A view of the title mol­ecule, with atom labelling. Displacement ellipsoids are drawn at the 50% probability level. Click here for additional data file. a . DOI: 10.1107/S1600536814017826/xu5808fig2.tif A viewed along the a axis of the crystal packing of the title compound. CCDC reference: 1017682 Additional supporting information: crystallographic information; 3D view; checkCIF report
C16H22N2OF(000) = 560
Mr = 258.36Dx = 1.195 Mg m3
Monoclinic, P21/nCu Kα radiation, λ = 1.54178 Å
Hall symbol: -P 2ynCell parameters from 2343 reflections
a = 9.1640 (17) Åθ = 6.7–64.8°
b = 13.1687 (18) ŵ = 0.59 mm1
c = 11.988 (2) ÅT = 296 K
β = 96.825 (11)°Block, colorless
V = 1436.4 (4) Å30.23 × 0.22 × 0.21 mm
Z = 4
Bruker X8 Proteum diffractometer2343 independent reflections
Radiation source: Bruker MicroStar microfocus rotating anode2106 reflections with I > 2σ(I)
Helios multilayer optics monochromatorRint = 0.028
Detector resolution: 18.4 pixels mm-1θmax = 64.8°, θmin = 6.7°
φ and ω scansh = −10→10
Absorption correction: multi-scan (SADABS; Bruker, 2013)k = −15→4
Tmin = 0.874, Tmax = 0.884l = −14→13
7903 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.049Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.139H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0671P)2 + 0.4283P] where P = (Fo2 + 2Fc2)/3
2343 reflections(Δ/σ)max < 0.001
173 parametersΔρmax = 0.34 e Å3
0 restraintsΔρmin = −0.36 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
O190.20029 (15)0.75502 (10)0.32245 (11)0.0661 (5)
N10.53573 (16)0.85016 (11)−0.01036 (12)0.0538 (5)
N120.28345 (14)0.90157 (10)0.25474 (10)0.0438 (4)
C20.60480 (18)0.82217 (14)0.10008 (15)0.0511 (6)
C30.52791 (17)0.87701 (14)0.18769 (14)0.0497 (5)
C40.36664 (17)0.84597 (12)0.17675 (13)0.0421 (5)
C50.29631 (17)0.85491 (12)0.05626 (13)0.0439 (5)
C60.1450 (2)0.86076 (16)0.03030 (16)0.0593 (6)
C70.0790 (2)0.86425 (19)−0.07861 (17)0.0718 (8)
C80.1649 (3)0.86264 (17)−0.16454 (16)0.0700 (7)
C90.3153 (2)0.85678 (14)−0.14226 (15)0.0605 (7)
C100.38380 (19)0.85289 (12)−0.03180 (14)0.0459 (5)
C110.7676 (2)0.84612 (19)0.1097 (2)0.0743 (8)
C130.28372 (19)1.01269 (13)0.25122 (14)0.0514 (6)
C140.3621 (2)1.06237 (15)0.35552 (17)0.0640 (7)
C150.2718 (3)1.06735 (17)0.45383 (18)0.0770 (8)
C160.2169 (3)0.96542 (17)0.49058 (17)0.0720 (8)
C170.1190 (2)0.90829 (16)0.40028 (17)0.0627 (7)
C180.20364 (18)0.84820 (14)0.32180 (13)0.0486 (6)
H10.588800.86510−0.062600.0640*
H20.592900.748900.109900.0610*
H3A0.535500.949800.177500.0600*
H3B0.574900.860100.262200.0600*
H40.363800.774000.197100.0510*
H60.086400.862400.088500.0710*
H7−0.022800.86770−0.093800.0860*
H80.121200.86550−0.238600.0840*
H90.372200.85540−0.201500.0730*
H11A0.811600.809200.053300.1120*
H11B0.813300.826700.182800.1120*
H11C0.780800.917600.099200.1120*
H13A0.182801.036400.240600.0620*
H13B0.330201.034400.186700.0620*
H14A0.389601.130800.336700.0770*
H14B0.451901.025000.378700.0770*
H15A0.331101.098300.517200.0920*
H15B0.187701.111200.433400.0920*
H16A0.162700.976100.554300.0860*
H16B0.301200.923200.515800.0860*
H17A0.056400.862300.436200.0750*
H17B0.056000.956600.356500.0750*
U11U22U33U12U13U23
O190.0806 (9)0.0577 (9)0.0692 (9)−0.0120 (7)0.0477 (7)−0.0006 (6)
N10.0525 (8)0.0624 (9)0.0526 (8)0.0030 (7)0.0321 (7)0.0032 (7)
N120.0447 (7)0.0501 (8)0.0406 (7)0.0023 (6)0.0221 (6)0.0023 (6)
C20.0446 (9)0.0534 (10)0.0599 (10)0.0014 (7)0.0254 (8)0.0009 (8)
C30.0411 (8)0.0607 (10)0.0501 (9)−0.0022 (7)0.0173 (7)−0.0045 (8)
C40.0419 (8)0.0472 (9)0.0412 (8)−0.0003 (7)0.0212 (6)0.0003 (7)
C50.0441 (9)0.0469 (9)0.0436 (9)−0.0039 (7)0.0179 (7)−0.0008 (7)
C60.0468 (10)0.0805 (13)0.0529 (10)−0.0060 (9)0.0161 (8)0.0002 (9)
C70.0567 (11)0.0964 (16)0.0609 (12)−0.0073 (11)0.0017 (9)0.0001 (11)
C80.0819 (14)0.0791 (14)0.0470 (10)−0.0082 (11)0.0000 (10)−0.0047 (9)
C90.0812 (14)0.0618 (11)0.0424 (9)−0.0068 (9)0.0238 (9)−0.0057 (8)
C100.0555 (9)0.0415 (9)0.0448 (9)−0.0023 (7)0.0227 (7)−0.0012 (7)
C110.0451 (10)0.0932 (16)0.0900 (15)0.0016 (10)0.0301 (10)−0.0044 (12)
C130.0576 (10)0.0523 (10)0.0480 (9)0.0097 (8)0.0219 (8)0.0091 (7)
C140.0803 (13)0.0496 (11)0.0641 (12)0.0029 (9)0.0170 (10)−0.0019 (9)
C150.1127 (18)0.0636 (13)0.0579 (12)0.0138 (12)0.0233 (12)−0.0091 (10)
C160.0985 (16)0.0738 (14)0.0498 (11)0.0185 (12)0.0348 (10)−0.0001 (9)
C170.0607 (11)0.0735 (13)0.0616 (11)0.0111 (9)0.0388 (9)0.0080 (10)
C180.0454 (9)0.0591 (11)0.0454 (9)0.0002 (7)0.0225 (7)0.0031 (7)
O19—C181.228 (2)C2—H20.9800
N1—C21.446 (2)C3—H3A0.9700
N1—C101.386 (2)C3—H3B0.9700
N12—C41.470 (2)C4—H40.9800
N12—C131.464 (2)C6—H60.9300
N12—C181.347 (2)C7—H70.9300
N1—H10.8600C8—H80.9300
C2—C111.516 (3)C9—H90.9300
C2—C31.516 (2)C11—H11A0.9600
C3—C41.524 (2)C11—H11B0.9600
C4—C51.515 (2)C11—H11C0.9600
C5—C61.387 (2)C13—H13A0.9700
C5—C101.400 (2)C13—H13B0.9700
C6—C71.373 (3)C14—H14A0.9700
C7—C81.369 (3)C14—H14B0.9700
C8—C91.375 (3)C15—H15A0.9700
C9—C101.397 (2)C15—H15B0.9700
C13—C141.515 (3)C16—H16A0.9700
C14—C151.520 (3)C16—H16B0.9700
C15—C161.517 (3)C17—H17A0.9700
C16—C171.521 (3)C17—H17B0.9700
C17—C181.512 (3)
C2—N1—C10119.82 (14)C5—C4—H4107.00
C4—N12—C13118.48 (12)C5—C6—H6119.00
C4—N12—C18118.62 (13)C7—C6—H6119.00
C13—N12—C18122.79 (14)C6—C7—H7120.00
C2—N1—H1120.00C8—C7—H7120.00
C10—N1—H1120.00C7—C8—H8120.00
C3—C2—C11112.49 (16)C9—C8—H8120.00
N1—C2—C3108.91 (14)C8—C9—H9120.00
N1—C2—C11109.66 (16)C10—C9—H9120.00
C2—C3—C4109.79 (14)C2—C11—H11A109.00
N12—C4—C5111.95 (13)C2—C11—H11B109.00
C3—C4—C5111.08 (13)C2—C11—H11C109.00
N12—C4—C3112.50 (13)H11A—C11—H11B110.00
C6—C5—C10118.62 (15)H11A—C11—H11C110.00
C4—C5—C6121.27 (15)H11B—C11—H11C109.00
C4—C5—C10120.05 (14)N12—C13—H13A109.00
C5—C6—C7122.08 (17)N12—C13—H13B109.00
C6—C7—C8119.17 (19)C14—C13—H13A109.00
C7—C8—C9120.51 (18)C14—C13—H13B109.00
C8—C9—C10120.89 (17)H13A—C13—H13B108.00
N1—C10—C5120.90 (15)C13—C14—H14A109.00
N1—C10—C9120.33 (16)C13—C14—H14B109.00
C5—C10—C9118.75 (16)C15—C14—H14A109.00
N12—C13—C14114.22 (14)C15—C14—H14B109.00
C13—C14—C15114.23 (16)H14A—C14—H14B108.00
C14—C15—C16114.64 (18)C14—C15—H15A109.00
C15—C16—C17114.77 (18)C14—C15—H15B109.00
C16—C17—C18113.52 (17)C16—C15—H15A109.00
N12—C18—C17116.96 (16)C16—C15—H15B109.00
O19—C18—N12122.76 (16)H15A—C15—H15B108.00
O19—C18—C17120.27 (16)C15—C16—H16A109.00
N1—C2—H2109.00C15—C16—H16B109.00
C3—C2—H2109.00C17—C16—H16A109.00
C11—C2—H2109.00C17—C16—H16B109.00
C2—C3—H3A110.00H16A—C16—H16B108.00
C2—C3—H3B110.00C16—C17—H17A109.00
C4—C3—H3A110.00C16—C17—H17B109.00
C4—C3—H3B110.00C18—C17—H17A109.00
H3A—C3—H3B108.00C18—C17—H17B109.00
N12—C4—H4107.00H17A—C17—H17B108.00
C3—C4—H4107.00
C10—N1—C2—C3−44.6 (2)C3—C4—C5—C6−160.41 (16)
C10—N1—C2—C11−168.08 (16)C3—C4—C5—C1022.4 (2)
C2—N1—C10—C516.6 (2)C4—C5—C6—C7−176.99 (19)
C2—N1—C10—C9−165.36 (16)C10—C5—C6—C70.2 (3)
C13—N12—C4—C356.10 (18)C4—C5—C10—N1−4.7 (2)
C13—N12—C4—C5−69.81 (17)C4—C5—C10—C9177.21 (15)
C18—N12—C4—C3−127.62 (15)C6—C5—C10—N1178.05 (16)
C18—N12—C4—C5106.48 (16)C6—C5—C10—C90.0 (2)
C4—N12—C13—C14−113.04 (16)C5—C6—C7—C8−0.5 (3)
C18—N12—C13—C1470.8 (2)C6—C7—C8—C90.5 (3)
C4—N12—C18—O191.8 (2)C7—C8—C9—C10−0.3 (3)
C4—N12—C18—C17−179.65 (14)C8—C9—C10—N1−178.00 (17)
C13—N12—C18—O19177.93 (15)C8—C9—C10—C50.1 (3)
C13—N12—C18—C17−3.5 (2)N12—C13—C14—C15−79.6 (2)
N1—C2—C3—C460.77 (18)C13—C14—C15—C1656.7 (3)
C11—C2—C3—C4−177.44 (16)C14—C15—C16—C17−59.5 (3)
C2—C3—C4—N12−176.30 (13)C15—C16—C17—C1883.3 (2)
C2—C3—C4—C5−49.92 (18)C16—C17—C18—O19112.4 (2)
N12—C4—C5—C6−33.7 (2)C16—C17—C18—N12−66.2 (2)
N12—C4—C5—C10149.10 (14)
D—H···AD—HH···AD···AD—H···A
N1—H1···O19i0.862.402.988 (2)126
C14—H14A···O19ii0.972.573.320 (2)134
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1⋯O19i 0.862.402.988 (2)126
C14—H14A⋯O19ii 0.972.573.320 (2)134

Symmetry codes: (i) ; (ii) .

  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  4 in total

1.  Crystal structure of ethyl 6-bromo-2-[(E)-2-phenyl-ethen-yl]quinoline-4-carboxyl-ate.

Authors:  T O Shrungesh Kumar; S Naveen; M N Kumara; K M Mahadevan; N K Lokanath
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-01-17

2.  Crystal structure of ethyl 2-(3,5-di-fluoro-phen-yl)quinoline-4-carboxyl-ate.

Authors:  V M Sunitha; S Naveen; H R Manjunath; S B Benaka Prasad; V Manivannan; N K Lokanath
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-04-25

3.  Crystal structure of ethyl 2-(2,4,5-tri-meth-oxy-phen-yl)quinoline-4-carboxyl-ate.

Authors:  T O Shrungesh Kumar; S Naveen; M N Kumara; K M Mahadevan; N K Lokanath
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-06-27

4.  Crystal structure of 1-[(2S*,4R*)-6-fluoro-2-methyl-1,2,3,4-tetra-hydro-quinolin-4-yl]pyrrolidin-2-one.

Authors:  P S Pradeep; S Naveen; M N Kumara; K M Mahadevan; N K Lokanath
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-08-30
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.