Literature DB >> 25309280

Crystal structure of 4-bromo-N-(2-bromo-3-nitro-benz-yl)-2-nitro-naphthalen-1-amine.

Vijay P Singh1, Krishnan Venkateshwaran1, Harkesh B Singh1, Ray J Butcher2.   

Abstract

In the title compound, C17H11Br2N3O4, the dihedral angle between the planes of the n class="Chemical">naphthalene system and the benzene ring is 52.86 (8)°. The nitro substituent and the attached naphthalene system are almost coplanar [dihedral angle = 5.6 (4)°], probably as a consequence of an intra-molecular N-H⋯O hydrogen bond with the amine group. The nitro substituent attached to the benzene ring is disordered over two sets of sites with occupancies of 0.694 (3) and 0.306 (3). The major component deviates significantly from the ring plane [dihedral angle = 53.6 (2)°]. In the crystal, the mol-ecules are linked into a three-dimensional array by extensive π-π inter-actions involving both the naphthalene and benzene rings [range of centroid-centroid distances = 3.5295 (16)-3.9629 (18) Å] and C-H⋯O inter-actions involving the methyl-ene H atoms and the phenyl-attached nitro group.

Entities:  

Keywords:  aryl­selenium compounds; crystal structure; hydrogen bonding; naphthalen-1-amine; photoluminescent seleno­spiro­cyclic compounds; π–π inter­actions

Year:  2014        PMID: 25309280      PMCID: PMC4186169          DOI: 10.1107/S160053681401719X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the role of secondary inter­actions in stabilizing organoselenium compounds, see; Singh et al. (2010 ▶, 2012 ▶); Mugesh & Singh (2000 ▶). For the isolation of novel photoluminescent seleno­spiro­cyclic compounds via inter­molecular C—C bond formation, see: Singh et al. (2011 ▶).

Experimental

Crystal data

C17H11Br2N3O4 M = 481.11 Triclinic, a = 8.3675 (4) Å b = 8.5812 (5) Å c = 12.2691 (5) Å α = 76.973 (4)° β = 81.053 (4)° γ = 76.302 (5)° V = 829.00 (8) Å3 Z = 2 Mo Kα radiation μ = 4.92 mm−1 T = 123 K 0.44 × 0.32 × 0.12 mm

Data collection

Agilent Xcalibur (Ruby, Gemini) diffractometer Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012 ▶) T min = 0.345, T max = 1.000 12164 measured reflections 6700 independent reflections 4118 reflections with I > 2σ(I) R int = 0.033

Refinement

R[F 2 > 2σ(F 2)] = 0.053 wR(F 2) = 0.129 S = 1.02 6700 reflections 246 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 1.04 e Å−3 Δρmin = −0.77 e Å−3

Data collection: CrysAlis PRO (Agilent, 2012 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶). Crystal structure: contains datablock(s) I. DOI: 10.1107/S160053681401719X/tk5325sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681401719X/tk5325Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S160053681401719X/tk5325Isup3.cml Click here for additional data file. . DOI: 10.1107/S160053681401719X/tk5325fig1.tif The reaction scheme. Click here for additional data file. 17 11 2 3 4 . DOI: 10.1107/S160053681401719X/tk5325fig2.tif The mol­ecular structure of C17H11Br2N3O4 showing the numbering scheme and 30% probability displacement ellipsoids and the intra­molecular N—H⋯O n class="Chemical">hydrogen bond (shown as a dashed bond). Click here for additional data file. 17 11 2 3 4 c . DOI: 10.1107/S160053681401719X/tk5325fig3.tif The mol­ecular packing for C17H11Br2N3O4 viewed along the c axis showing the linking of the mol­ecules into a three-dimensional array by π–π inter­actions as well as a network of C—H⋯O inter­actions (shown as dashed bonds). CCDC reference: 1015963 Additional supporting information: crystallographic information; 3D view; checkCIF report
C17H11Br2N3O4Z = 2
Mr = 481.11F(000) = 472
Triclinic, P1Dx = 1.927 Mg m3
a = 8.3675 (4) ÅMo Kα radiation, λ = 0.71073 Å
b = 8.5812 (5) ÅCell parameters from 3926 reflections
c = 12.2691 (5) Åθ = 5.0–34.9°
α = 76.973 (4)°µ = 4.92 mm1
β = 81.053 (4)°T = 123 K
γ = 76.302 (5)°Plate, orange
V = 829.00 (8) Å30.44 × 0.32 × 0.12 mm
Agilent Xcalibur (Ruby, Gemini) diffractometer4118 reflections with I > 2σ(I)
Detector resolution: 10.5081 pixels mm-1Rint = 0.033
ω scansθmax = 35.0°, θmin = 5.0°
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012)h = −13→13
Tmin = 0.345, Tmax = 1.000k = −12→13
12164 measured reflectionsl = −19→19
6700 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.053Hydrogen site location: mixed
wR(F2) = 0.129H atoms treated by a mixture of independent and constrained refinement
S = 1.02w = 1/[σ2(Fo2) + (0.0498P)2 + 0.3384P] where P = (Fo2 + 2Fc2)/3
6700 reflections(Δ/σ)max = 0.001
246 parametersΔρmax = 1.04 e Å3
1 restraintΔρmin = −0.77 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/UeqOcc. (<1)
Br10.52119 (4)0.68126 (4)0.76444 (2)0.03410 (10)
Br20.98711 (4)0.82225 (4)0.23405 (3)0.03346 (10)
O10.9351 (3)0.3484 (3)0.5032 (2)0.0374 (6)
O20.8810 (3)0.4048 (3)0.3315 (2)0.0346 (5)
O3A1.3573 (4)0.6322 (4)0.0114 (3)0.0334 (7)0.694 (3)
O4A1.2701 (4)0.8769 (5)0.0461 (4)0.0480 (10)0.694 (3)
O3B1.3147 (8)0.8513 (9)−0.0408 (7)0.0334 (7)0.306 (3)
O4B1.3038 (10)0.6768 (10)0.1138 (8)0.0480 (10)0.306 (3)
N10.6518 (3)0.6613 (3)0.2639 (2)0.0230 (5)
H1N0.724 (4)0.577 (4)0.254 (3)0.027 (9)*
N20.8518 (3)0.4286 (3)0.4272 (2)0.0240 (5)
N31.2471 (3)0.7536 (3)0.0266 (2)0.0276 (6)
C10.6183 (3)0.6659 (3)0.3756 (2)0.0171 (5)
C20.7114 (3)0.5555 (3)0.4567 (2)0.0196 (5)
C30.6804 (3)0.5624 (3)0.5728 (2)0.0211 (5)
H3A0.74670.48540.62520.025*
C40.5575 (3)0.6778 (4)0.6087 (2)0.0216 (5)
C50.4516 (3)0.7931 (3)0.5332 (2)0.0183 (5)
C60.3170 (3)0.9116 (4)0.5696 (3)0.0264 (6)
H6A0.29980.92170.64630.032*
C70.2119 (3)1.0113 (4)0.4962 (3)0.0292 (7)
H7A0.12401.09170.52200.035*
C80.2318 (3)0.9967 (4)0.3842 (3)0.0267 (6)
H8A0.15521.06420.33460.032*
C90.3622 (3)0.8845 (3)0.3448 (2)0.0216 (5)
H9A0.37410.87490.26820.026*
C100.4788 (3)0.7832 (3)0.4170 (2)0.0171 (5)
C120.6425 (3)0.8012 (4)0.1692 (2)0.0224 (6)
H12A0.64300.90140.19610.027*
H12B0.53830.81850.13510.027*
C130.7896 (3)0.7678 (3)0.0821 (2)0.0196 (5)
C140.9489 (3)0.7762 (3)0.0981 (2)0.0197 (5)
C151.0768 (3)0.7462 (4)0.0142 (2)0.0220 (6)
C161.0535 (3)0.7066 (4)−0.0846 (2)0.0265 (6)
H16A1.14370.6861−0.14060.032*
C170.8958 (4)0.6977 (4)−0.1002 (2)0.0286 (6)
H17A0.87650.6709−0.16740.034*
C180.7659 (3)0.7280 (4)−0.0171 (2)0.0251 (6)
H18A0.65810.7213−0.02840.030*
U11U22U33U12U13U23
Br10.03423 (17)0.0569 (2)0.01698 (15)−0.01906 (15)0.00074 (12)−0.01145 (14)
Br20.03155 (17)0.0494 (2)0.02682 (17)−0.01218 (14)−0.00825 (13)−0.01525 (14)
O10.0319 (11)0.0295 (13)0.0449 (15)0.0057 (9)−0.0109 (11)−0.0035 (11)
O20.0336 (12)0.0256 (12)0.0354 (13)0.0041 (9)0.0090 (10)−0.0068 (10)
O3A0.0187 (13)0.0379 (18)0.0399 (18)−0.0008 (12)−0.0021 (12)−0.0062 (14)
O4A0.0293 (16)0.042 (2)0.077 (3)−0.0142 (15)−0.0194 (17)−0.0033 (19)
O3B0.0187 (13)0.0379 (18)0.0399 (18)−0.0008 (12)−0.0021 (12)−0.0062 (14)
O4B0.0293 (16)0.042 (2)0.077 (3)−0.0142 (15)−0.0194 (17)−0.0033 (19)
N10.0283 (12)0.0210 (13)0.0178 (11)−0.0034 (10)0.0014 (9)−0.0045 (9)
N20.0187 (10)0.0158 (12)0.0353 (14)−0.0023 (9)−0.0050 (10)−0.0002 (10)
N30.0184 (11)0.0345 (16)0.0282 (13)−0.0085 (11)−0.0050 (10)0.0023 (11)
C10.0144 (10)0.0196 (13)0.0179 (12)−0.0063 (9)0.0009 (9)−0.0039 (10)
C20.0168 (11)0.0173 (13)0.0237 (13)−0.0033 (10)−0.0009 (10)−0.0032 (10)
C30.0202 (12)0.0237 (14)0.0189 (13)−0.0079 (10)−0.0044 (10)0.0020 (10)
C40.0213 (12)0.0310 (15)0.0162 (12)−0.0127 (11)−0.0005 (10)−0.0056 (11)
C50.0145 (10)0.0204 (13)0.0220 (13)−0.0078 (9)0.0028 (9)−0.0075 (10)
C60.0230 (13)0.0292 (16)0.0311 (16)−0.0082 (11)0.0046 (12)−0.0163 (12)
C70.0185 (12)0.0239 (16)0.046 (2)−0.0037 (11)0.0035 (12)−0.0147 (14)
C80.0173 (12)0.0191 (14)0.0401 (18)−0.0009 (10)−0.0033 (12)−0.0016 (12)
C90.0164 (11)0.0251 (15)0.0229 (13)−0.0046 (10)−0.0052 (10)−0.0018 (11)
C100.0148 (10)0.0152 (12)0.0206 (13)−0.0032 (9)−0.0023 (9)−0.0021 (9)
C120.0187 (11)0.0292 (15)0.0179 (13)−0.0031 (10)−0.0026 (10)−0.0033 (11)
C130.0185 (11)0.0246 (14)0.0149 (12)−0.0050 (10)−0.0023 (9)−0.0010 (10)
C140.0221 (12)0.0208 (14)0.0167 (12)−0.0060 (10)−0.0062 (10)−0.0002 (10)
C150.0141 (11)0.0264 (15)0.0244 (14)−0.0056 (10)−0.0039 (10)−0.0003 (11)
C160.0183 (12)0.0381 (18)0.0205 (14)−0.0055 (12)0.0021 (10)−0.0036 (12)
C170.0287 (14)0.0424 (19)0.0159 (13)−0.0087 (13)−0.0025 (11)−0.0066 (12)
C180.0205 (12)0.0385 (18)0.0185 (14)−0.0105 (12)−0.0042 (10)−0.0039 (12)
Br1—C41.893 (3)C6—C71.364 (5)
Br2—C141.887 (3)C6—H6A0.9500
O1—N21.231 (3)C7—C81.388 (5)
O2—N21.214 (3)C7—H7A0.9500
O3A—N31.245 (4)C8—C91.378 (4)
O4A—N31.199 (4)C8—H8A0.9500
O3B—N31.214 (7)C9—C101.419 (4)
O4B—N31.224 (9)C9—H9A0.9500
N1—C11.363 (3)C12—C131.517 (4)
N1—C121.467 (4)C12—H12A0.9900
N1—H1N0.85 (3)C12—H12B0.9900
N2—C21.461 (3)C13—C181.390 (4)
N3—C151.474 (3)C13—C141.398 (4)
C1—C21.400 (4)C14—C151.386 (4)
C1—C101.457 (4)C15—C161.383 (4)
C2—C31.420 (4)C16—C171.385 (4)
C3—C41.344 (4)C16—H16A0.9500
C3—H3A0.9500C17—C181.388 (4)
C4—C51.432 (4)C17—H17A0.9500
C5—C61.417 (4)C18—H18A0.9500
C5—C101.426 (4)
C1—N1—C12127.2 (2)C9—C8—C7120.2 (3)
C1—N1—H1N111 (2)C9—C8—H8A119.9
C12—N1—H1N116 (2)C7—C8—H8A119.9
O2—N2—O1122.8 (3)C8—C9—C10121.0 (3)
O2—N2—C2120.1 (2)C8—C9—H9A119.5
O1—N2—C2117.1 (3)C10—C9—H9A119.5
O3B—N3—O4B122.8 (5)C9—C10—C5118.2 (2)
O4A—N3—O3A125.1 (3)C9—C10—C1121.3 (2)
O4A—N3—C15118.2 (3)C5—C10—C1120.5 (2)
O3B—N3—C15119.2 (4)N1—C12—C13109.3 (2)
O4B—N3—C15117.1 (4)N1—C12—H12A109.8
O3A—N3—C15116.7 (3)C13—C12—H12A109.8
N1—C1—C2122.2 (2)N1—C12—H12B109.8
N1—C1—C10121.2 (2)C13—C12—H12B109.8
C2—C1—C10116.6 (2)H12A—C12—H12B108.3
C1—C2—C3122.5 (2)C18—C13—C14118.7 (2)
C1—C2—N2122.3 (3)C18—C13—C12119.2 (2)
C3—C2—N2115.1 (3)C14—C13—C12122.1 (3)
C4—C3—C2120.1 (3)C15—C14—C13118.8 (3)
C4—C3—H3A120.0C15—C14—Br2121.3 (2)
C2—C3—H3A120.0C13—C14—Br2119.9 (2)
C3—C4—C5121.8 (3)C16—C15—C14122.6 (2)
C3—C4—Br1118.3 (2)C16—C15—N3116.3 (2)
C5—C4—Br1119.9 (2)C14—C15—N3121.1 (3)
C6—C5—C10118.8 (3)C15—C16—C17118.5 (3)
C6—C5—C4122.8 (3)C15—C16—H16A120.7
C10—C5—C4118.4 (2)C17—C16—H16A120.7
C7—C6—C5121.0 (3)C16—C17—C18119.7 (3)
C7—C6—H6A119.5C16—C17—H17A120.2
C5—C6—H6A119.5C18—C17—H17A120.2
C6—C7—C8120.8 (3)C17—C18—C13121.7 (3)
C6—C7—H7A119.6C17—C18—H18A119.2
C8—C7—H7A119.6C13—C18—H18A119.2
C12—N1—C1—C2−141.9 (3)N1—C1—C10—C97.0 (4)
C12—N1—C1—C1040.5 (4)C2—C1—C10—C9−170.8 (2)
N1—C1—C2—C3178.1 (2)N1—C1—C10—C5−176.1 (2)
C10—C1—C2—C3−4.1 (4)C2—C1—C10—C56.2 (3)
N1—C1—C2—N20.6 (4)C1—N1—C12—C13138.6 (3)
C10—C1—C2—N2178.3 (2)N1—C12—C13—C18105.6 (3)
O2—N2—C2—C1−7.7 (4)N1—C12—C13—C14−74.5 (3)
O1—N2—C2—C1173.1 (2)C18—C13—C14—C150.6 (4)
O2—N2—C2—C3174.6 (2)C12—C13—C14—C15−179.2 (3)
O1—N2—C2—C3−4.6 (3)C18—C13—C14—Br2−177.7 (2)
C1—C2—C3—C40.2 (4)C12—C13—C14—Br22.4 (4)
N2—C2—C3—C4177.9 (2)C13—C14—C15—C16−0.6 (4)
C2—C3—C4—C51.9 (4)Br2—C14—C15—C16177.7 (2)
C2—C3—C4—Br1179.86 (19)C13—C14—C15—N3179.9 (3)
C3—C4—C5—C6177.4 (3)Br2—C14—C15—N3−1.7 (4)
Br1—C4—C5—C6−0.6 (3)O4A—N3—C15—C16125.2 (4)
C3—C4—C5—C100.2 (4)O3B—N3—C15—C1660.9 (6)
Br1—C4—C5—C10−177.74 (18)O4B—N3—C15—C16−129.3 (6)
C10—C5—C6—C72.0 (4)O3A—N3—C15—C16−52.1 (4)
C4—C5—C6—C7−175.2 (3)O4A—N3—C15—C14−55.3 (4)
C5—C6—C7—C81.5 (4)O3B—N3—C15—C14−119.6 (6)
C6—C7—C8—C9−2.3 (4)O4B—N3—C15—C1450.2 (6)
C7—C8—C9—C10−0.5 (4)O3A—N3—C15—C14127.4 (3)
C8—C9—C10—C53.9 (4)C14—C15—C16—C170.4 (5)
C8—C9—C10—C1−179.1 (2)N3—C15—C16—C17179.8 (3)
C6—C5—C10—C9−4.6 (4)C15—C16—C17—C18−0.1 (5)
C4—C5—C10—C9172.7 (2)C16—C17—C18—C130.2 (5)
C6—C5—C10—C1178.4 (2)C14—C13—C18—C17−0.4 (4)
C4—C5—C10—C1−4.3 (4)C12—C13—C18—C17179.4 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1N···O20.84 (3)1.91 (3)2.624 (3)141 (3)
C12—H12A···O3Bi0.992.573.117 (8)115
C12—H12B···O4Aii0.992.543.532 (4)177
C12—H12B···O4Bii0.992.613.462 (8)144
Ring 1Ring 2DistancePerpedicular distanceSlippageSymmetry
Cg1Cg13.5295 (16)3.3867 (11)0.941-x,1-y,1-z
Cg2Cg23.8868 (15)3.3859 (12)1.911-x,-y,1-z
Cg3Cg33.9629 (18)3.5873 (12)1.68-x,1-y,2-z
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1N⋯O20.84 (3)1.91 (3)2.624 (3)141 (3)
C12—H12B⋯O4A i 0.992.543.532 (4)177
C12—H12B⋯O4B i 0.992.613.462 (8)144

Symmetry code: (i) .

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