Literature DB >> 25309267

Crystal structure of ethyl 2-chloro-6-methyl-quinoline-3-carboxyl-ate.

Hasna Hayour1, Abdelmalek Bouraiou1, Sofiane Bouacida2, Saida Benzerka3, Ali Belfaitah1.   

Abstract

In the title compound, C13H12ClNO2, the dihedral angle between the planes of the quinoline ring system (r.m.s. deviation = 0.029 Å) and the ester group is 54.97 (6)°. The C-O-C-Cm (m = meth-yl) torsion angle is -140.62 (16)°. In the crystal, mol-ecules inter-act via aromatic π-π stacking [shortest centroid-centroid separation = 3.6774 (9) Å] generating (010) sheets.

Entities:  

Keywords:  2-chloro-3-formyl­quinoline; crystal structure; ethyl ester; π–π stacking

Year:  2014        PMID: 25309267      PMCID: PMC4186161          DOI: 10.1107/S1600536814016900

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to 2-chloro-3-formyl­quinolines, see: Michael (2004 ▶); Abdel-Wahab et al. (2012 ▶). For our previous work in this area, see: Benzerka et al. (2012 ▶, 2013 ▶).

Experimental

Crystal data

C13H12ClNO2 M = 249.69 Triclinic, a = 6.0391 (5) Å b = 7.2986 (6) Å c = 13.4323 (12) Å α = 98.238 (6)° β = 90.123 (5)° γ = 96.429 (6)° V = 582.16 (9) Å3 Z = 2 Mo Kα radiation μ = 0.32 mm−1 T = 150 K 0.18 × 0.14 × 0.12 mm

Data collection

Bruker APEXII diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2006 ▶) T min = 0.690, T max = 0.747 5190 measured reflections 2061 independent reflections 1872 reflections with I > 2σ(I) R int = 0.016

Refinement

R[F 2 > 2σ(F 2)] = 0.028 wR(F 2) = 0.078 S = 1.06 2061 reflections 156 parameters H-atom parameters constrained Δρmax = 0.25 e Å−3 Δρmin = −0.20 e Å−3

Data collection: APEX2 (Bruker, 2006 ▶); cell refinement: SAINT (Bruker, 2006 ▶); data reduction: SAINT; program(s) used to solve structure: SIR2002 (Burla et al., 2005 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶) and DIAMOND (Brandenburg & Berndt, 2001 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶). Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536814016900/hb7259sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814016900/hb7259Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814016900/hb7259Isup3.cml Click here for additional data file. . DOI: 10.1107/S1600536814016900/hb7259fig1.tif The structure of the title compound with displacement ellipsoids drawn at the 50% probability level. Click here for additional data file. a . DOI: 10.1107/S1600536814016900/hb7259fig2.tif A diagram of the layered crystal packing of (I) viewed down the a axis. CCDC reference: 1015360 Additional supporting information: crystallographic information; 3D view; checkCIF report
C13H12ClNO2Z = 2
Mr = 249.69F(000) = 260
Triclinic, P1Dx = 1.424 Mg m3
a = 6.0391 (5) ÅMo Kα radiation, λ = 0.71073 Å
b = 7.2986 (6) ÅCell parameters from 2875 reflections
c = 13.4323 (12) Åθ = 2.8–25.0°
α = 98.238 (6)°µ = 0.32 mm1
β = 90.123 (5)°T = 150 K
γ = 96.429 (6)°BLOCK, colourless
V = 582.16 (9) Å30.18 × 0.14 × 0.12 mm
Bruker APEXII diffractometer1872 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.016
CCD rotation images, thin slices scansθmax = 25.1°, θmin = 2.8°
Absorption correction: multi-scan (SADABS; Bruker, 2006)h = −7→7
Tmin = 0.690, Tmax = 0.747k = −8→8
5190 measured reflectionsl = −16→15
2061 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.028Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.078H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0383P)2 + 0.2333P] where P = (Fo2 + 2Fc2)/3
2061 reflections(Δ/σ)max < 0.001
156 parametersΔρmax = 0.25 e Å3
0 restraintsΔρmin = −0.20 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C100.6109 (2)0.4100 (2)0.31856 (11)0.0233 (3)
C110.7716 (3)0.2270 (2)−0.23686 (11)0.0281 (4)
H11A0.72180.3141−0.27680.042*
H11B0.75820.105−0.27570.042*
H11C0.92460.2644−0.21690.042*
C120.7931 (3)0.6667 (2)0.42998 (12)0.0356 (4)
H12A0.95310.66360.43270.043*
H12B0.72580.59670.48050.043*
C130.7400 (4)0.8609 (3)0.44891 (14)0.0491 (5)
H13A0.81050.92970.39950.074*
H13B0.79340.91710.51490.074*
H13C0.58150.86250.44470.074*
O10.70435 (19)0.58589 (15)0.33028 (8)0.0290 (3)
O20.6007 (2)0.31046 (17)0.38231 (9)0.0374 (3)
C10.3008 (2)0.27029 (19)0.19204 (11)0.0204 (3)
C20.5237 (2)0.35132 (19)0.21333 (11)0.0203 (3)
C30.6587 (2)0.36577 (19)0.13282 (11)0.0209 (3)
H30.8040.42310.14290.025*
C40.5801 (2)0.29487 (19)0.03486 (11)0.0193 (3)
C50.7131 (2)0.29932 (19)−0.05125 (11)0.0216 (3)
H50.85950.3552−0.04410.026*
C60.6313 (2)0.22322 (19)−0.14494 (11)0.0217 (3)
C70.4081 (3)0.1369 (2)−0.15399 (11)0.0242 (3)
H70.35170.083−0.21720.029*
C80.2740 (2)0.1305 (2)−0.07286 (11)0.0231 (3)
H80.12830.0733−0.08120.028*
C90.3560 (2)0.21049 (19)0.02358 (11)0.0198 (3)
Cl10.11327 (6)0.26599 (5)0.29105 (3)0.02749 (13)
N10.2174 (2)0.20436 (16)0.10369 (9)0.0218 (3)
U11U22U33U12U13U23
C100.0187 (7)0.0291 (8)0.0229 (8)0.0065 (6)0.0032 (6)0.0034 (6)
C110.0327 (9)0.0288 (8)0.0235 (8)0.0071 (7)0.0035 (7)0.0039 (6)
C120.0407 (10)0.0442 (10)0.0191 (8)0.0002 (8)−0.0072 (7)−0.0014 (7)
C130.0723 (14)0.0412 (11)0.0298 (10)0.0039 (10)−0.0100 (9)−0.0065 (8)
O10.0382 (6)0.0265 (6)0.0204 (5)−0.0006 (5)−0.0049 (5)0.0009 (4)
O20.0440 (7)0.0414 (7)0.0278 (6)−0.0020 (5)−0.0028 (5)0.0144 (5)
C10.0213 (7)0.0180 (7)0.0237 (8)0.0053 (6)0.0043 (6)0.0061 (6)
C20.0212 (7)0.0177 (7)0.0231 (7)0.0056 (6)0.0015 (6)0.0040 (6)
C30.0185 (7)0.0188 (7)0.0253 (8)0.0014 (6)−0.0005 (6)0.0034 (6)
C40.0202 (7)0.0144 (7)0.0240 (7)0.0040 (5)0.0008 (6)0.0039 (6)
C50.0190 (7)0.0195 (7)0.0270 (8)0.0029 (6)0.0014 (6)0.0052 (6)
C60.0266 (8)0.0169 (7)0.0235 (7)0.0070 (6)0.0022 (6)0.0058 (6)
C70.0306 (8)0.0202 (7)0.0218 (8)0.0044 (6)−0.0045 (6)0.0023 (6)
C80.0217 (7)0.0193 (7)0.0279 (8)0.0002 (6)−0.0031 (6)0.0043 (6)
C90.0209 (7)0.0155 (7)0.0241 (7)0.0043 (5)0.0005 (6)0.0053 (6)
Cl10.0230 (2)0.0336 (2)0.0276 (2)0.00604 (15)0.00824 (15)0.00777 (16)
N10.0200 (6)0.0194 (6)0.0267 (7)0.0027 (5)0.0020 (5)0.0052 (5)
C10—O21.1971 (18)C1—C21.419 (2)
C10—O11.3308 (18)C1—Cl11.7501 (14)
C10—C21.494 (2)C2—C31.365 (2)
C11—C61.501 (2)C3—C41.404 (2)
C11—H11A0.96C3—H30.93
C11—H11B0.96C4—C51.411 (2)
C11—H11C0.96C4—C91.421 (2)
C12—O11.4588 (19)C5—C61.368 (2)
C12—C131.475 (3)C5—H50.93
C12—H12A0.97C6—C71.420 (2)
C12—H12B0.97C7—C81.362 (2)
C13—H13A0.96C7—H70.93
C13—H13B0.96C8—C91.407 (2)
C13—H13C0.96C8—H80.93
C1—N11.2935 (19)C9—N11.3673 (19)
O2—C10—O1125.26 (14)C3—C2—C1116.71 (13)
O2—C10—C2124.26 (14)C3—C2—C10121.18 (13)
O1—C10—C2110.47 (12)C1—C2—C10122.05 (13)
C6—C11—H11A109.5C2—C3—C4120.61 (13)
C6—C11—H11B109.5C2—C3—H3119.7
H11A—C11—H11B109.5C4—C3—H3119.7
C6—C11—H11C109.5C3—C4—C5123.51 (13)
H11A—C11—H11C109.5C3—C4—C9117.37 (13)
H11B—C11—H11C109.5C5—C4—C9119.10 (13)
O1—C12—C13107.55 (14)C6—C5—C4121.45 (13)
O1—C12—H12A110.2C6—C5—H5119.3
C13—C12—H12A110.2C4—C5—H5119.3
O1—C12—H12B110.2C5—C6—C7118.37 (13)
C13—C12—H12B110.2C5—C6—C11121.79 (13)
H12A—C12—H12B108.5C7—C6—C11119.84 (13)
C12—C13—H13A109.5C8—C7—C6121.99 (14)
C12—C13—H13B109.5C8—C7—H7119
H13A—C13—H13B109.5C6—C7—H7119
C12—C13—H13C109.5C7—C8—C9119.98 (14)
H13A—C13—H13C109.5C7—C8—H8120
H13B—C13—H13C109.5C9—C8—H8120
C10—O1—C12117.45 (12)N1—C9—C8118.90 (13)
N1—C1—C2125.71 (13)N1—C9—C4122.00 (13)
N1—C1—Cl1115.40 (11)C8—C9—C4119.10 (13)
C2—C1—Cl1118.82 (11)C1—N1—C9117.48 (12)
O2—C10—O1—C12−2.8 (2)C9—C4—C5—C6−0.4 (2)
C2—C10—O1—C12178.41 (12)C4—C5—C6—C7−0.6 (2)
C13—C12—O1—C10−140.62 (16)C4—C5—C6—C11−179.88 (13)
N1—C1—C2—C32.2 (2)C5—C6—C7—C81.0 (2)
Cl1—C1—C2—C3−174.62 (10)C11—C6—C7—C8−179.76 (13)
N1—C1—C2—C10−174.93 (13)C6—C7—C8—C9−0.2 (2)
Cl1—C1—C2—C108.23 (18)C7—C8—C9—N1179.20 (12)
O2—C10—C2—C3−123.43 (17)C7—C8—C9—C4−0.9 (2)
O1—C10—C2—C355.34 (18)C3—C4—C9—N12.7 (2)
O2—C10—C2—C153.6 (2)C5—C4—C9—N1−178.89 (12)
O1—C10—C2—C1−127.63 (14)C3—C4—C9—C8−177.25 (12)
C1—C2—C3—C4−2.9 (2)C5—C4—C9—C81.2 (2)
C10—C2—C3—C4174.25 (12)C2—C1—N1—C91.0 (2)
C2—C3—C4—C5−177.71 (13)Cl1—C1—N1—C9177.90 (9)
C2—C3—C4—C90.7 (2)C8—C9—N1—C1176.48 (12)
C3—C4—C5—C6177.92 (13)C4—C9—N1—C1−3.4 (2)
  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 2.  Quinoline, quinazoline and acridone alkaloids.

Authors:  Joseph P Michael
Journal:  Nat Prod Rep       Date:  2004-09-14       Impact factor: 13.423

  2 in total

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