Literature DB >> 25309260

Crystal structure of ethyl 3-anilino-2-{[bis-(methyl-sulfan-yl)methyl-idene]amino}-3-oxopropano-ate.

A Kémish López-Rodríguez1, Alfonso Lira-Rocha1, Marcos Flores-Alamo2.   

Abstract

The mol-ecular conformation of the title compound, C14H18N2O3S2, is stabilized by intra-molecular N-H⋯N and C-H⋯O hydrogen bonds. The crystal packing is characterized by a series of C-H⋯O hydrogen bonds, resulting in a three-dimensional network.

Entities:  

Keywords:  crystal structure; hydrogen bonding; thia­zolo[5,4-b]quinoline derivative

Year:  2014        PMID: 25309260      PMCID: PMC4186088          DOI: 10.1107/S1600536814016560

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis and cytotoxic activity of thia­zolo[5,4-b]quinoline derivatives, see: Rodríguez-Loaiza et al. (2004 ▶); Loza-Mejía et al. (2008 ▶, 2009 ▶); Adams et al. (2002 ▶).

Experimental

Crystal data

C14H18N2O3S2 M = 326.42 Triclinic, a = 8.5298 (11) Å b = 9.1422 (16) Å c = 11.0268 (13) Å α = 101.377 (12)° β = 102.102 (10)° γ = 104.457 (13)° V = 785.3 (2) Å3 Z = 2 Mo Kα radiation μ = 0.35 mm−1 T = 145 K 0.6 × 0.5 × 0.35 mm

Data collection

Agilent Xcalibur Atlas Gemini diffractometer Absorption correction: analytical (CrysAlis RED; Agilent, 2012 ▶) T min = 0.87, T max = 0.922 5879 measured reflections 3625 independent reflections 3022 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.101 S = 1.05 3625 reflections 197 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.34 e Å−3 Δρmin = −0.36 e Å−3

Data collection: CrysAlis PRO (Agilent, 2012 ▶); cell refinement: CrysAlis CCD; data reduction: CrysAlis RED (Agilent, 2012 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536814016560/bt6988sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814016560/bt6988Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814016560/bt6988Isup3.cml Click here for additional data file. . DOI: 10.1107/S1600536814016560/bt6988fig1.tif The mol­ecular structure of the title compound. Displacement ellipsoids are drawn at the 50% probability level and H atoms are shown as circles of arbitrary size. Click here for additional data file. . DOI: 10.1107/S1600536814016560/bt6988fig2.tif Crystal packing with inter­molecular inter­actions of type C—H⋯O forming a three-dimensional network. CCDC reference: 1014381 Additional supporting information: crystallographic information; 3D view; checkCIF report
C14H18N2O3S2Z = 2
Mr = 326.42F(000) = 344
Triclinic, P1Dx = 1.38 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.5298 (11) ÅCell parameters from 2290 reflections
b = 9.1422 (16) Åθ = 3.6–29.4°
c = 11.0268 (13) ŵ = 0.35 mm1
α = 101.377 (12)°T = 145 K
β = 102.102 (10)°Block, colourless
γ = 104.457 (13)°0.6 × 0.5 × 0.35 mm
V = 785.3 (2) Å3
Agilent Xcalibur Atlas Gemini diffractometer3625 independent reflections
Graphite monochromator3022 reflections with I > 2σ(I)
Detector resolution: 10.4685 pixels mm-1Rint = 0.028
ω scansθmax = 29.4°, θmin = 3.6°
Absorption correction: analytical (CrysAlis RED; Agilent, 2012)h = −11→11
Tmin = 0.87, Tmax = 0.922k = −9→11
5879 measured reflectionsl = −15→14
Refinement on F2H atoms treated by a mixture of independent and constrained refinement
Least-squares matrix: fullw = 1/[σ2(Fo2) + (0.0448P)2 + 0.1551P] where P = (Fo2 + 2Fc2)/3
R[F2 > 2σ(F2)] = 0.039(Δ/σ)max < 0.001
wR(F2) = 0.101Δρmax = 0.34 e Å3
S = 1.05Δρmin = −0.36 e Å3
3625 reflectionsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
197 parametersExtinction coefficient: 0.033 (3)
1 restraint
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
C10.22485 (19)0.68715 (19)0.59186 (14)0.0184 (3)
C20.1478 (2)0.8032 (2)0.57936 (16)0.0216 (4)
H20.07860.79970.49850.026*
C30.1738 (2)0.9243 (2)0.68710 (16)0.0260 (4)
H30.12171.00380.67920.031*
C40.2741 (2)0.9311 (2)0.80562 (17)0.0289 (4)
H40.29091.01460.87840.035*
C50.3498 (2)0.8150 (2)0.81709 (16)0.0276 (4)
H50.41880.8190.89810.033*
C60.3254 (2)0.6930 (2)0.71085 (16)0.0241 (4)
H60.37730.61350.71930.029*
C70.13582 (19)0.5349 (2)0.36177 (15)0.0194 (3)
C80.1513 (2)0.38584 (19)0.27795 (14)0.0187 (3)
H80.03620.31410.22940.022*
C90.24576 (19)0.43850 (19)0.18264 (15)0.0188 (3)
C100.2175 (2)0.4733 (2)−0.02788 (15)0.0244 (4)
H10A0.31760.56630.01320.029*
H10B0.13630.5023−0.08970.029*
C110.2686 (2)0.3427 (2)−0.09767 (18)0.0325 (4)
H11A0.3150.3746−0.16590.049*
H11B0.17010.2496−0.13560.049*
H11C0.35410.3186−0.03720.049*
C120.2467 (2)0.1698 (2)0.31142 (14)0.0195 (3)
C130.2088 (2)−0.1139 (2)0.13307 (17)0.0294 (4)
H13A0.1576−0.180.04480.044*
H13B0.1628−0.16730.19250.044*
H13C0.3309−0.09440.15450.044*
C140.4017 (3)0.2120 (2)0.56368 (16)0.0317 (4)
H14A0.47780.30920.55890.048*
H14B0.45950.17230.63050.048*
H14C0.30180.23240.58470.048*
N10.20693 (17)0.56002 (17)0.48823 (12)0.0200 (3)
N20.23886 (17)0.30580 (16)0.35854 (12)0.0200 (3)
O10.06584 (17)0.61847 (16)0.31231 (11)0.0308 (3)
O20.39713 (14)0.48975 (15)0.20888 (11)0.0265 (3)
O30.14030 (13)0.42455 (14)0.07059 (10)0.0217 (3)
S10.16283 (5)0.06980 (5)0.14655 (4)0.02388 (13)
S20.33924 (6)0.06874 (5)0.41135 (4)0.02561 (14)
H1F0.254 (2)0.487 (2)0.5037 (18)0.031*
U11U22U33U12U13U23
C10.0190 (7)0.0190 (9)0.0168 (7)0.0042 (6)0.0079 (6)0.0029 (6)
C20.0246 (8)0.0205 (9)0.0218 (8)0.0075 (7)0.0089 (7)0.0064 (7)
C30.0335 (9)0.0187 (9)0.0300 (9)0.0100 (7)0.0155 (8)0.0061 (7)
C40.0343 (9)0.0227 (10)0.0251 (9)0.0037 (8)0.0121 (8)−0.0017 (7)
C50.0272 (9)0.0317 (11)0.0187 (8)0.0059 (8)0.0030 (7)0.0024 (7)
C60.0243 (8)0.0268 (10)0.0220 (8)0.0095 (7)0.0061 (7)0.0059 (7)
C70.0205 (7)0.0190 (9)0.0189 (7)0.0062 (6)0.0062 (7)0.0044 (6)
C80.0210 (7)0.0178 (8)0.0165 (7)0.0065 (6)0.0035 (6)0.0040 (6)
C90.0217 (8)0.0162 (8)0.0182 (7)0.0080 (6)0.0036 (7)0.0025 (6)
C100.0272 (8)0.0315 (10)0.0191 (8)0.0124 (7)0.0075 (7)0.0113 (7)
C110.0356 (10)0.0377 (12)0.0288 (9)0.0133 (9)0.0161 (8)0.0086 (8)
C120.0212 (7)0.0201 (9)0.0177 (7)0.0057 (6)0.0062 (7)0.0055 (6)
C130.0382 (10)0.0196 (9)0.0280 (9)0.0107 (8)0.0077 (8)−0.0001 (7)
C140.0426 (10)0.0306 (11)0.0177 (8)0.0121 (9)−0.0001 (8)0.0043 (7)
N10.0251 (7)0.0197 (8)0.0175 (6)0.0116 (6)0.0057 (6)0.0040 (5)
N20.0243 (7)0.0189 (7)0.0173 (6)0.0082 (6)0.0048 (6)0.0049 (5)
O10.0461 (7)0.0291 (7)0.0208 (6)0.0229 (6)0.0034 (6)0.0061 (5)
O20.0202 (6)0.0324 (8)0.0245 (6)0.0052 (5)0.0029 (5)0.0092 (5)
O30.0208 (6)0.0300 (7)0.0153 (5)0.0094 (5)0.0038 (5)0.0072 (5)
S10.0304 (2)0.0213 (2)0.0173 (2)0.00912 (18)0.00318 (17)0.00107 (16)
S20.0351 (3)0.0212 (2)0.0211 (2)0.01201 (19)0.00365 (19)0.00657 (17)
C1—C61.392 (2)C10—O31.4683 (19)
C1—C21.395 (2)C10—C111.498 (3)
C1—N11.412 (2)C10—H10A0.99
C2—C31.390 (2)C10—H10B0.99
C2—H20.95C11—H11A0.98
C3—C41.384 (3)C11—H11B0.98
C3—H30.95C11—H11C0.98
C4—C51.386 (3)C12—N21.273 (2)
C4—H40.95C12—S21.7587 (17)
C5—C61.388 (2)C12—S11.7678 (16)
C5—H50.95C13—S11.8035 (19)
C6—H60.95C13—H13A0.98
C7—O11.2217 (19)C13—H13B0.98
C7—N11.347 (2)C13—H13C0.98
C7—C81.541 (2)C14—S21.7968 (18)
C8—N21.461 (2)C14—H14A0.98
C8—C91.532 (2)C14—H14B0.98
C8—H81C14—H14C0.98
C9—O21.2075 (19)N1—H1F0.889 (15)
C9—O31.3292 (18)
C6—C1—C2120.11 (15)C11—C10—H10A109.6
C6—C1—N1116.63 (15)O3—C10—H10B109.6
C2—C1—N1123.25 (14)C11—C10—H10B109.6
C3—C2—C1118.97 (16)H10A—C10—H10B108.2
C3—C2—H2120.5C10—C11—H11A109.5
C1—C2—H2120.5C10—C11—H11B109.5
C4—C3—C2121.22 (17)H11A—C11—H11B109.5
C4—C3—H3119.4C10—C11—H11C109.5
C2—C3—H3119.4H11A—C11—H11C109.5
C3—C4—C5119.36 (16)H11B—C11—H11C109.5
C3—C4—H4120.3N2—C12—S2120.47 (12)
C5—C4—H4120.3N2—C12—S1123.28 (12)
C4—C5—C6120.39 (16)S2—C12—S1116.23 (10)
C4—C5—H5119.8S1—C13—H13A109.5
C6—C5—H5119.8S1—C13—H13B109.5
C5—C6—C1119.94 (17)H13A—C13—H13B109.5
C5—C6—H6120S1—C13—H13C109.5
C1—C6—H6120H13A—C13—H13C109.5
O1—C7—N1126.13 (16)H13B—C13—H13C109.5
O1—C7—C8120.39 (14)S2—C14—H14A109.5
N1—C7—C8113.48 (14)S2—C14—H14B109.5
N2—C8—C9112.30 (13)H14A—C14—H14B109.5
N2—C8—C7110.24 (12)S2—C14—H14C109.5
C9—C8—C7106.50 (13)H14A—C14—H14C109.5
N2—C8—H8109.2H14B—C14—H14C109.5
C9—C8—H8109.2C7—N1—C1129.37 (14)
C7—C8—H8109.2C7—N1—H1F111.8 (13)
O2—C9—O3125.06 (15)C1—N1—H1F118.7 (13)
O2—C9—C8123.37 (14)C12—N2—C8120.84 (13)
O3—C9—C8111.54 (13)C9—O3—C10116.15 (12)
O3—C10—C11110.09 (15)C12—S1—C13104.78 (8)
O3—C10—H10A109.6C12—S2—C1499.96 (8)
C6—C1—C2—C30.3 (2)O1—C7—N1—C1−2.9 (3)
N1—C1—C2—C3−179.69 (15)C8—C7—N1—C1176.35 (15)
C1—C2—C3—C4−0.1 (3)C6—C1—N1—C7−171.05 (16)
C2—C3—C4—C5−0.1 (3)C2—C1—N1—C78.9 (3)
C3—C4—C5—C60.0 (3)S2—C12—N2—C8−175.45 (11)
C4—C5—C6—C10.2 (3)S1—C12—N2—C82.8 (2)
C2—C1—C6—C5−0.4 (2)C9—C8—N2—C12−70.50 (19)
N1—C1—C6—C5179.60 (15)C7—C8—N2—C12170.92 (14)
O1—C7—C8—N2−179.82 (15)O2—C9—O3—C101.2 (2)
N1—C7—C8—N20.92 (19)C8—C9—O3—C10179.46 (13)
O1—C7—C8—C958.11 (19)C11—C10—O3—C983.60 (18)
N1—C7—C8—C9−121.15 (14)N2—C12—S1—C13179.81 (14)
N2—C8—C9—O2−38.3 (2)S2—C12—S1—C13−1.86 (12)
C7—C8—C9—O282.41 (19)N2—C12—S2—C14−1.14 (16)
N2—C8—C9—O3143.40 (13)S1—C12—S2—C14−179.52 (10)
C7—C8—C9—O3−95.84 (15)
D—H···AD—HH···AD···AD—H···A
N1—H1F···N20.889 (15)2.019 (18)2.586 (2)120.5 (15)
C2—H2···O10.952.332.932 (2)121
C6—H6···O2i0.952.43.295 (2)156
C10—H10B···O1ii0.992.533.340 (2)138
C10—H10B···O3ii0.992.653.377 (2)131
C11—H11A···O2iii0.982.643.465 (2)141
C13—H13B···O1iv0.982.633.579 (2)162
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1F⋯N20.889 (15)2.019 (18)2.586 (2)120.5 (15)
C2—H2⋯O10.952.332.932 (2)121
C6—H6⋯O2i 0.952.43.295 (2)156
C10—H10B⋯O1ii 0.992.533.340 (2)138
C10—H10B⋯O3ii 0.992.653.377 (2)131
C11—H11A⋯O2iii 0.982.643.465 (2)141
C13—H13B⋯O1iv 0.982.633.579 (2)162

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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