| Literature DB >> 25309248 |
Pushpendra Singh1, Harkesh B Singh1, Ray J Butcher2.
Abstract
In the title mol-ecularEntities:
Keywords: C—H⋯Cl interactions; crystal structure; hydrogen bonds; inversion twin; ion-triplets
Year: 2014 PMID: 25309248 PMCID: PMC4186135 DOI: 10.1107/S1600536814015797
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H22N22+·2Cl− | |
| Monoclinic, | Cu |
| Cell parameters from 1555 reflections | |
| θ = 4.0–76.4° | |
| µ = 3.79 mm−1 | |
| β = 105.372 (12)° | |
| Needle, colorless | |
| 0.49 × 0.16 × 0.13 mm |
| Agilent Xcalibur, Ruby, Gemini diffractometer | 1961 reflections with |
| Detector resolution: 10.5081 pixels mm-1 | |
| ω scans | θmax = 76.6°, θmin = 4.0° |
| Absorption correction: multi-scan ( | |
| 2002 measured reflections | |
| 1986 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 1986 reflections | Δρmax = 1.15 e Å−3 |
| 149 parameters | Δρmin = −0.62 e Å−3 |
| 7 restraints | Absolute structure: Refined as an inversion twin. |
| Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.25 (7) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refined as a 2-component inversion twin. |
| Cl1 | 0.5443 (3) | 0.30227 (7) | 1.3350 (2) | 0.0313 (4) | |
| Cl2 | −0.5635 (2) | 0.48206 (5) | 0.67629 (19) | 0.0219 (3) | |
| N1 | 0.0818 (16) | 0.3087 (4) | 0.9195 (14) | 0.052 (2) | |
| H1A | 0.2296 | 0.3060 | 1.0540 | 0.063* | |
| N2 | −0.0884 (18) | 0.4633 (5) | 1.083 (2) | 0.061 (2) | |
| H2B | −0.2225 | 0.4640 | 0.9363 | 0.074* | |
| C1 | 0.092 (2) | 0.1998 (6) | 0.814 (2) | 0.065 (3) | |
| C2 | −0.012 (3) | 0.1787 (6) | 0.583 (2) | 0.078 (4) | |
| H2A | −0.1656 | 0.1919 | 0.4903 | 0.094* | |
| C3 | 0.141 (3) | 0.1344 (6) | 0.500 (2) | 0.075 (3) | |
| H3A | 0.0818 | 0.1180 | 0.3493 | 0.090* | |
| C4 | 0.359 (3) | 0.1172 (6) | 0.629 (3) | 0.092 (4) | |
| H4A | 0.4563 | 0.0907 | 0.5670 | 0.110* | |
| C5 | 0.446 (3) | 0.1374 (7) | 0.855 (3) | 0.094 (5) | |
| H5A | 0.6003 | 0.1239 | 0.9458 | 0.113* | |
| C6 | 0.310 (2) | 0.1772 (6) | 0.950 (2) | 0.074 (3) | |
| H6A | 0.3662 | 0.1887 | 1.1075 | 0.088* | |
| C7 | −0.044 (3) | 0.2487 (6) | 0.896 (2) | 0.067 (3) | |
| H7A | −0.0677 | 0.2372 | 1.0479 | 0.080* | |
| H7B | −0.2077 | 0.2525 | 0.7861 | 0.080* | |
| C8 | 0.171 (2) | 0.3228 (4) | 0.7060 (17) | 0.050 (2) | |
| H8A | 0.2488 | 0.3622 | 0.7239 | 0.074* | |
| H8B | 0.0318 | 0.3227 | 0.5683 | 0.074* | |
| H8C | 0.2896 | 0.2925 | 0.6890 | 0.074* | |
| C9 | −0.065 (2) | 0.3554 (5) | 0.967 (2) | 0.057 (3) | |
| H9A | −0.1454 | 0.3416 | 1.0862 | 0.069* | |
| H9B | −0.1955 | 0.3646 | 0.8253 | 0.069* | |
| C10 | 0.079 (2) | 0.4127 (6) | 1.0534 (19) | 0.058 (3) | |
| H10A | 0.1997 | 0.4047 | 1.2031 | 0.069* | |
| H10B | 0.1706 | 0.4249 | 0.9411 | 0.069* | |
| C11 | −0.205 (3) | 0.4576 (7) | 1.257 (3) | 0.075 (4) | |
| H11A | −0.0833 | 0.4579 | 1.4077 | 0.113* | |
| H11B | −0.2958 | 0.4198 | 1.2383 | 0.113* | |
| H11C | −0.3186 | 0.4910 | 1.2494 | 0.113* | |
| C12 | 0.045 (3) | 0.5223 (6) | 1.088 (2) | 0.066 (3) | |
| H12A | −0.0741 | 0.5546 | 1.0381 | 0.099* | |
| H12B | 0.1517 | 0.5202 | 0.9838 | 0.099* | |
| H12C | 0.1441 | 0.5304 | 1.2459 | 0.099* |
| Cl1 | 0.0262 (7) | 0.0399 (11) | 0.0259 (7) | −0.0014 (7) | 0.0034 (6) | 0.0010 (6) |
| Cl2 | 0.0176 (6) | 0.0285 (7) | 0.0176 (6) | −0.0026 (6) | 0.0012 (4) | 0.0048 (5) |
| N1 | 0.049 (4) | 0.063 (5) | 0.038 (4) | −0.010 (4) | −0.001 (3) | 0.007 (4) |
| N2 | 0.044 (4) | 0.060 (6) | 0.084 (6) | 0.002 (4) | 0.024 (4) | 0.005 (4) |
| C1 | 0.065 (6) | 0.067 (7) | 0.067 (6) | 0.001 (5) | 0.026 (5) | −0.006 (5) |
| C2 | 0.082 (9) | 0.080 (8) | 0.065 (7) | −0.004 (7) | 0.007 (6) | −0.004 (6) |
| C3 | 0.091 (8) | 0.053 (6) | 0.081 (7) | −0.008 (7) | 0.023 (6) | −0.012 (6) |
| C4 | 0.107 (10) | 0.045 (6) | 0.143 (13) | 0.000 (7) | 0.067 (9) | −0.017 (7) |
| C5 | 0.084 (9) | 0.055 (6) | 0.130 (12) | 0.005 (8) | 0.006 (8) | −0.012 (9) |
| C6 | 0.067 (7) | 0.083 (9) | 0.071 (7) | −0.003 (6) | 0.019 (6) | 0.002 (6) |
| C7 | 0.076 (7) | 0.070 (7) | 0.060 (6) | −0.003 (6) | 0.025 (5) | −0.002 (5) |
| C8 | 0.060 (6) | 0.049 (6) | 0.034 (4) | −0.005 (4) | 0.002 (4) | 0.002 (3) |
| C9 | 0.050 (5) | 0.063 (6) | 0.060 (6) | 0.006 (5) | 0.016 (5) | 0.003 (5) |
| C10 | 0.050 (5) | 0.065 (6) | 0.049 (5) | 0.007 (5) | −0.004 (4) | 0.009 (4) |
| C11 | 0.056 (6) | 0.086 (8) | 0.078 (7) | −0.009 (6) | 0.007 (6) | −0.018 (6) |
| C12 | 0.061 (6) | 0.068 (7) | 0.063 (7) | 0.011 (6) | 0.006 (5) | 0.006 (5) |
| N1—C9 | 1.413 (15) | C5—H5A | 0.9500 |
| N1—C7 | 1.511 (17) | C6—H6A | 0.9500 |
| N1—C8 | 1.530 (14) | C7—H7A | 0.9900 |
| N1—H1A | 1.0000 | C7—H7B | 0.9900 |
| N2—C11 | 1.38 (2) | C8—H8A | 0.9800 |
| N2—C10 | 1.520 (16) | C8—H8B | 0.9800 |
| N2—C12 | 1.521 (17) | C8—H8C | 0.9800 |
| N2—H2B | 1.0000 | C9—C10 | 1.538 (16) |
| C1—C6 | 1.382 (18) | C9—H9A | 0.9900 |
| C1—C2 | 1.435 (18) | C9—H9B | 0.9900 |
| C1—C7 | 1.497 (18) | C10—H10A | 0.9900 |
| C2—C3 | 1.49 (2) | C10—H10B | 0.9900 |
| C2—H2A | 0.9500 | C11—H11A | 0.9800 |
| C3—C4 | 1.33 (2) | C11—H11B | 0.9800 |
| C3—H3A | 0.9500 | C11—H11C | 0.9800 |
| C4—C5 | 1.39 (2) | C12—H12A | 0.9800 |
| C4—H4A | 0.9500 | C12—H12B | 0.9800 |
| C5—C6 | 1.40 (2) | C12—H12C | 0.9800 |
| C9—N1—C7 | 112.7 (9) | C1—C7—H7B | 108.7 |
| C9—N1—C8 | 111.3 (9) | N1—C7—H7B | 108.7 |
| C7—N1—C8 | 111.0 (8) | H7A—C7—H7B | 107.6 |
| C9—N1—H1A | 107.2 | N1—C8—H8A | 109.5 |
| C7—N1—H1A | 107.2 | N1—C8—H8B | 109.5 |
| C8—N1—H1A | 107.2 | H8A—C8—H8B | 109.5 |
| C11—N2—C10 | 117.4 (11) | N1—C8—H8C | 109.5 |
| C11—N2—C12 | 113.6 (11) | H8A—C8—H8C | 109.5 |
| C10—N2—C12 | 109.0 (9) | H8B—C8—H8C | 109.5 |
| C11—N2—H2B | 105.2 | N1—C9—C10 | 113.1 (9) |
| C10—N2—H2B | 105.2 | N1—C9—H9A | 109.0 |
| C12—N2—H2B | 105.2 | C10—C9—H9A | 109.0 |
| C6—C1—C2 | 121.6 (13) | N1—C9—H9B | 109.0 |
| C6—C1—C7 | 122.1 (12) | C10—C9—H9B | 109.0 |
| C2—C1—C7 | 116.3 (12) | H9A—C9—H9B | 107.8 |
| C1—C2—C3 | 114.6 (13) | N2—C10—C9 | 111.4 (9) |
| C1—C2—H2A | 122.7 | N2—C10—H10A | 109.3 |
| C3—C2—H2A | 122.7 | C9—C10—H10A | 109.3 |
| C4—C3—C2 | 122.1 (13) | N2—C10—H10B | 109.3 |
| C4—C3—H3A | 118.9 | C9—C10—H10B | 109.3 |
| C2—C3—H3A | 118.9 | H10A—C10—H10B | 108.0 |
| C3—C4—C5 | 120.6 (15) | N2—C11—H11A | 109.5 |
| C3—C4—H4A | 119.7 | N2—C11—H11B | 109.5 |
| C5—C4—H4A | 119.7 | H11A—C11—H11B | 109.5 |
| C4—C5—C6 | 121.0 (14) | N2—C11—H11C | 109.5 |
| C4—C5—H5A | 119.5 | H11A—C11—H11C | 109.5 |
| C6—C5—H5A | 119.5 | H11B—C11—H11C | 109.5 |
| C1—C6—C5 | 119.7 (13) | N2—C12—H12A | 109.5 |
| C1—C6—H6A | 120.1 | N2—C12—H12B | 109.5 |
| C5—C6—H6A | 120.1 | H12A—C12—H12B | 109.5 |
| C1—C7—N1 | 114.2 (11) | N2—C12—H12C | 109.5 |
| C1—C7—H7A | 108.7 | H12A—C12—H12C | 109.5 |
| N1—C7—H7A | 108.7 | H12B—C12—H12C | 109.5 |
| C6—C1—C2—C3 | −4 (2) | C2—C1—C7—N1 | −108.9 (14) |
| C7—C1—C2—C3 | 174.3 (12) | C9—N1—C7—C1 | 172.2 (10) |
| C1—C2—C3—C4 | −1 (2) | C8—N1—C7—C1 | 46.6 (13) |
| C2—C3—C4—C5 | 4 (2) | C7—N1—C9—C10 | 165.1 (9) |
| C3—C4—C5—C6 | −1 (3) | C8—N1—C9—C10 | −69.5 (11) |
| C2—C1—C6—C5 | 7 (2) | C11—N2—C10—C9 | 67.8 (13) |
| C7—C1—C6—C5 | −171.5 (14) | C12—N2—C10—C9 | −161.2 (10) |
| C4—C5—C6—C1 | −4 (2) | N1—C9—C10—N2 | 175.1 (10) |
| C6—C1—C7—N1 | 69.3 (16) |
| H··· | ||||
| N1—H1 | 1.00 | 2.11 | 3.107 (8) | 179 |
| N2—H2 | 1.00 | 2.18 | 3.148 (11) | 163 |
| C7—H7 | 0.99 | 2.92 | 3.749 (13) | 142 |
| C8—H8 | 0.98 | 2.93 | 3.893 (10) | 168 |
| C8—H8 | 0.98 | 2.79 | 3.690 (11) | 154 |
| C8—H8 | 0.98 | 2.88 | 3.486 (12) | 121 |
| C9—H9 | 0.99 | 2.74 | 3.711 (12) | 168 |
| C10—H10 | 0.99 | 2.98 | 3.682 (11) | 129 |
| C10—H10 | 0.99 | 2.78 | 3.750 (13) | 168 |
| C11—H11 | 0.98 | 2.89 | 3.831 (17) | 161 |
| C12—H12 | 0.98 | 2.89 | 3.842 (15) | 166 |
| C12—H12 | 0.98 | 2.88 | 3.747 (13) | 147 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1 | 1.00 | 2.11 | 3.107 (8) | 179 |
| N2—H2 | 1.00 | 2.18 | 3.148 (11) | 163 |
| C7—H7 | 0.99 | 2.92 | 3.749 (13) | 142 |
| C8—H8 | 0.98 | 2.93 | 3.893 (10) | 168 |
| C8—H8 | 0.98 | 2.79 | 3.690 (11) | 154 |
| C8—H8 | 0.98 | 2.88 | 3.486 (12) | 121 |
| C9—H9 | 0.99 | 2.74 | 3.711 (12) | 168 |
| C10—H10 | 0.99 | 2.98 | 3.682 (11) | 129 |
| C10—H10 | 0.99 | 2.78 | 3.750 (13) | 168 |
| C11—H11 | 0.98 | 2.89 | 3.831 (17) | 161 |
| C12—H12 | 0.98 | 2.89 | 3.842 (15) | 166 |
| C12—H12 | 0.98 | 2.88 | 3.747 (13) | 147 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .