Literature DB >> 25309239

Crystal structure of 2,5-bis-(4-methyl-pyridin-2-yl)pyrazine chloro-form disolvate.

Laurette Schmitt1, Helen Stoeckli-Evans1.   

Abstract

The heterocyclic molecule in the title solvate, C16H14N4·2CHCl3, possesses inversion symmetry, with the inversion centre situated at the centre of the pyrazine ring. The outer pyridine rings are inclined to the central pyrazine ring by 4.89 (9)°. The compound crystallized as a chloro-form disolvate with the solvent mol-ecules linked to the title mol-ecule by C-H⋯N hydrogen bonds. In the crystal, mol-ecules are further linked by π-π inter-actions involving the pyrazine and pyridine rings of neighbouring mol-ecules [inter-centroid distance = 3.5629 (12) Å; symmetry code: x, y + 1, z + 1].

Entities:  

Keywords:  bis(2-pyridyl)pyrazine; crystal structure; pyrazine; pyridine; solvate

Year:  2014        PMID: 25309239      PMCID: PMC4186168          DOI: 10.1107/S1600536814009544

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

The title compound is the 4-methyl­pyridine derivative of the ligand 2,5-bis­(pyridin-2-yl)pyrazine (bppz), see: Neels & Stoeckli-Evans (1993 ▶); Schmitt (2008 ▶). For the synthesis of a number of transition-metal complexes of bppz, especially of copper(II), and for their magnetic properties, see for example: Escuer et al. (1993 ▶); Neels et al. (1995 ▶); Yuste et al. (2009 ▶); Bentama et al. (2012 ▶).

Experimental

Crystal data

C16H14N4·2CHCl3 M = 501.05 Monoclinic, a = 16.4498 (17) Å b = 6.0691 (4) Å c = 21.605 (3) Å β = 93.885 (9)° V = 2152.0 (4) Å3 Z = 4 Mo Kα radiation μ = 0.81 mm−1 T = 173 K 0.45 × 0.29 × 0.23 mm

Data collection

Stoe IPDS 2 diffractometer Absorption correction: multi-scan (MULscanABS in PLATON; Spek, 2009 ▶) T min = 0.567, T max = 1.000 9566 measured reflections 1902 independent reflections 1676 reflections with I > 2σ(I) R int = 0.066

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.112 S = 1.06 1902 reflections 129 parameters H-atom parameters constrained Δρmax = 0.31 e Å−3 Δρmin = −0.30 e Å−3

Data collection: X-AREA (Stoe & Cie, 2009 ▶); cell refinement: X-AREA; data reduction: X-RED32 (Stoe & Cie, 2009 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2008 ▶); molecular graphics: Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: SHELXL2013, PLATON (Spek, 2009 ▶) and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S1600536814009544/wm0002sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814009544/wm0002Isup2.hkl Click here for additional data file. . DOI: 10.1107/S1600536814009544/wm0002fig1.tif A view of the mol­ecular structure of the title compound, with atom labelling [unlabelled atoms are generated by inversion symmetry (symmetry code: −x + 3/2, −y + 3/2, −z + 1/2)]. Displacement ellipsoids are drawn at the 50% probability level. The C—H⋯N hydrogen bonds are shown as dashed lines (see Table 1 for details). Click here for additional data file. . DOI: 10.1107/S1600536814009544/wm0002fig2.tif A view of the crystal packing of the title compound, illustrating the overlap of the pyrazine and pyridine rings of neighbouring mol­ecules. CCDC reference: 1004308 Additional supporting information: crystallographic information; 3D view; checkCIF report
C16H14N4·2CHCl3F(000) = 1016
Mr = 501.05Dx = 1.546 Mg m3
Monoclinic, I2/aMo Kα radiation, λ = 0.71073 Å
a = 16.4498 (17) ÅCell parameters from 12496 reflections
b = 6.0691 (4) Åθ = 1.5–25.6°
c = 21.605 (3) ŵ = 0.81 mm1
β = 93.885 (9)°T = 173 K
V = 2152.0 (4) Å3Rod, colourless
Z = 40.45 × 0.29 × 0.23 mm
Stoe IPDS 2 diffractometer1902 independent reflections
Radiation source: fine-focus sealed tube1676 reflections with I > 2σ(I)
Plane graphite monochromatorRint = 0.066
φ + ω scansθmax = 25.2°, θmin = 1.9°
Absorption correction: multi-scan (MULscanABS in PLATON; Spek, 2009)h = −19→19
Tmin = 0.567, Tmax = 1.000k = −7→7
9566 measured reflectionsl = −25→25
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.040w = 1/[σ2(Fo2) + (0.0725P)2 + 0.8241P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.112(Δ/σ)max = 0.002
S = 1.06Δρmax = 0.31 e Å3
1902 reflectionsΔρmin = −0.30 e Å3
129 parametersExtinction correction: SHELXL2013 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
0 restraintsExtinction coefficient: 0.0064 (11)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
N10.72397 (10)0.6344 (3)0.19653 (8)0.0368 (4)
N20.89303 (10)0.2947 (3)0.25318 (8)0.0394 (4)
C10.68638 (12)0.8157 (3)0.21400 (9)0.0374 (4)
H10.64060.86770.18900.045*
C20.78878 (11)0.5676 (3)0.23260 (8)0.0328 (4)
C30.83238 (11)0.3674 (3)0.21341 (9)0.0328 (4)
C40.93307 (13)0.1154 (3)0.23585 (10)0.0418 (5)
H40.97710.06350.26270.050*
C50.91455 (13)0.0006 (3)0.18141 (10)0.0401 (5)
H50.9446−0.12740.17200.048*
C60.85181 (12)0.0739 (3)0.14075 (9)0.0376 (5)
C70.81112 (11)0.2637 (3)0.15755 (9)0.0378 (5)
H70.76850.32240.13050.045*
C80.82828 (15)−0.0466 (4)0.08138 (11)0.0510 (6)
H8A0.7910−0.16720.08980.077*
H8B0.8772−0.10660.06420.077*
H8C0.80120.05560.05150.077*
Cl10.50499 (4)0.55130 (10)0.09961 (3)0.0569 (2)
Cl20.65296 (4)0.52518 (12)0.03495 (3)0.0617 (3)
Cl30.57200 (4)0.12697 (10)0.06982 (3)0.0582 (2)
C100.59461 (13)0.4006 (3)0.09061 (10)0.0416 (5)
H100.62750.39990.13120.050*
U11U22U33U12U13U23
N10.0398 (9)0.0332 (9)0.0377 (9)−0.0008 (7)0.0045 (7)−0.0041 (7)
N20.0429 (9)0.0351 (9)0.0405 (9)0.0005 (7)0.0053 (7)−0.0032 (7)
C10.0404 (10)0.0333 (10)0.0385 (10)−0.0002 (8)0.0035 (8)−0.0027 (8)
C20.0356 (10)0.0294 (10)0.0340 (10)−0.0039 (8)0.0075 (7)0.0008 (8)
C30.0343 (9)0.0290 (9)0.0358 (10)−0.0042 (7)0.0090 (7)−0.0001 (7)
C40.0467 (11)0.0374 (11)0.0417 (11)0.0052 (9)0.0054 (8)−0.0004 (8)
C50.0460 (11)0.0326 (10)0.0433 (11)0.0022 (8)0.0140 (9)−0.0003 (8)
C60.0424 (10)0.0343 (10)0.0377 (10)−0.0038 (8)0.0136 (8)−0.0047 (8)
C70.0388 (10)0.0381 (11)0.0372 (10)−0.0011 (8)0.0077 (8)−0.0025 (8)
C80.0578 (13)0.0499 (13)0.0460 (12)0.0046 (10)0.0076 (10)−0.0152 (10)
Cl10.0557 (4)0.0538 (4)0.0613 (4)0.0130 (3)0.0040 (3)−0.0024 (3)
Cl20.0589 (4)0.0759 (5)0.0507 (4)−0.0204 (3)0.0069 (3)0.0140 (3)
Cl30.0758 (5)0.0417 (4)0.0594 (4)−0.0037 (3)0.0207 (3)−0.0062 (2)
C100.0449 (11)0.0426 (11)0.0376 (11)−0.0012 (9)0.0041 (8)0.0024 (9)
N1—C11.329 (3)C5—H50.9500
N1—C21.340 (3)C6—C71.393 (3)
N2—C41.339 (3)C6—C81.504 (3)
N2—C31.346 (3)C7—H70.9500
C1—C2i1.391 (3)C8—H8A0.9800
C1—H10.9500C8—H8B0.9800
C2—C1i1.391 (3)C8—H8C0.9800
C2—C31.484 (3)Cl1—C101.757 (2)
C3—C71.385 (3)Cl2—C101.760 (2)
C4—C51.383 (3)Cl3—C101.753 (2)
C4—H40.9500C10—H101.0000
C5—C61.383 (3)
C1—N1—C2116.90 (17)C5—C6—C8121.56 (19)
C4—N2—C3116.44 (17)C7—C6—C8121.58 (19)
N1—C1—C2i122.74 (18)C3—C7—C6120.36 (18)
N1—C1—H1118.6C3—C7—H7119.8
C2i—C1—H1118.6C6—C7—H7119.8
N1—C2—C1i120.36 (17)C6—C8—H8A109.5
N1—C2—C3117.77 (16)C6—C8—H8B109.5
C1i—C2—C3121.87 (17)H8A—C8—H8B109.5
N2—C3—C7122.68 (17)C6—C8—H8C109.5
N2—C3—C2116.19 (16)H8A—C8—H8C109.5
C7—C3—C2121.13 (17)H8B—C8—H8C109.5
N2—C4—C5124.3 (2)Cl3—C10—Cl1110.88 (12)
N2—C4—H4117.9Cl3—C10—Cl2110.37 (12)
C5—C4—H4117.9Cl1—C10—Cl2110.64 (12)
C6—C5—C4119.35 (19)Cl3—C10—H10108.3
C6—C5—H5120.3Cl1—C10—H10108.3
C4—C5—H5120.3Cl2—C10—H10108.3
C5—C6—C7116.86 (18)
C2—N1—C1—C2i−0.8 (3)C3—N2—C4—C5−1.7 (3)
C1—N1—C2—C1i0.7 (3)N2—C4—C5—C61.2 (3)
C1—N1—C2—C3−179.12 (16)C4—C5—C6—C70.6 (3)
C4—N2—C3—C70.5 (3)C4—C5—C6—C8−179.05 (19)
C4—N2—C3—C2−179.40 (16)N2—C3—C7—C61.2 (3)
N1—C2—C3—N2−174.82 (17)C2—C3—C7—C6−178.94 (16)
C1i—C2—C3—N25.3 (3)C5—C6—C7—C3−1.7 (3)
N1—C2—C3—C75.3 (3)C8—C6—C7—C3177.96 (19)
C1i—C2—C3—C7−174.56 (18)
D—H···AD—HH···AD···AD—H···A
C10—H10···N11.002.503.335 (3)141
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C10—H10⋯N11.002.503.335 (3)141
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