| Literature DB >> 25309230 |
Gamal A El-Hiti1, Keith Smith2, Amany S Hegazy2, Mohammed Baashen3, Benson M Kariuki2.
Abstract
In the title compound, C17H27N3OS2, the amide group is approximately coplanar with the pyridine ring [dihedral angle = 1.6 (1)°], whereas the di-thio-carbamate group is nearly perpendicular to the pyridine ring [dihedral angle = 76.7 (1)°]. In the crystal, pairs of weak C-H⋯O hydrogen bonds link the mol-ecules into inversion dimers.Entities:
Keywords: crystal structure; dithiocarbamate; hydrogen bonding; pyridine derivatives
Year: 2014 PMID: 25309230 PMCID: PMC4186077 DOI: 10.1107/S1600536814019321
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C17H27N3OS2 | |
| Triclinic, | |
| Cu | |
| Cell parameters from 3458 reflections | |
| θ = 4.7–73.3° | |
| α = 83.099 (8)° | µ = 2.52 mm−1 |
| β = 83.227 (8)° | |
| γ = 84.608 (7)° | Block, colourless |
| 0.36 × 0.24 × 0.19 mm |
| Agilent SuperNova (Dual, Cu at zero, Atlas) diffractometer | 3391 reflections with |
| Radiation source: sealed X-ray tube | |
| ω scans | θmax = 73.5°, θmin = 4.7° |
| Absorption correction: multi-scan ( | |
| 6616 measured reflections | |
| 3779 independent reflections |
| Refinement on | 0 restraints |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 3779 reflections | Δρmax = 0.39 e Å−3 |
| 215 parameters | Δρmin = −0.29 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| C1 | 0.0193 (4) | 0.7422 (4) | 0.4668 (2) | 0.0459 (7) | |
| C2 | 0.1318 (4) | 0.6291 (3) | 0.4352 (2) | 0.0452 (7) | |
| C3 | 0.2680 (5) | 0.5875 (4) | 0.4929 (3) | 0.0537 (8) | |
| H3 | 0.3449 | 0.5121 | 0.4759 | 0.064* | |
| C4 | 0.2866 (5) | 0.6596 (5) | 0.5752 (3) | 0.0635 (10) | |
| H4 | 0.3792 | 0.6311 | 0.6120 | 0.076* | |
| C5 | 0.0505 (5) | 0.8057 (4) | 0.5520 (3) | 0.0565 (8) | |
| H5 | −0.0253 | 0.8798 | 0.5727 | 0.068* | |
| C6 | −0.1194 (4) | 0.8903 (3) | 0.2919 (2) | 0.0419 (6) | |
| C7 | −0.2165 (5) | 1.0250 (5) | 0.1370 (3) | 0.0658 (10) | |
| H7 | −0.0963 | 1.0426 | 0.1293 | 0.079* | |
| C8 | −0.3150 (9) | 1.1680 (6) | 0.1370 (5) | 0.0960 (17) | |
| H8A | −0.4341 | 1.1560 | 0.1441 | 0.144* | |
| H8B | −0.2847 | 1.2250 | 0.0729 | 0.144* | |
| H8C | −0.2889 | 1.2141 | 0.1939 | 0.144* | |
| C9 | −0.2421 (9) | 0.9459 (7) | 0.0484 (4) | 0.1004 (18) | |
| H9A | −0.1624 | 0.8641 | 0.0467 | 0.151* | |
| H9B | −0.2250 | 1.0063 | −0.0156 | 0.151* | |
| H9C | −0.3552 | 0.9165 | 0.0573 | 0.151* | |
| C10 | −0.4303 (4) | 0.9068 (4) | 0.2679 (3) | 0.0534 (8) | |
| H10 | −0.4906 | 0.9553 | 0.2108 | 0.064* | |
| C11 | −0.4589 (6) | 0.7522 (5) | 0.2694 (4) | 0.0733 (12) | |
| H11A | −0.4032 | 0.7174 | 0.2071 | 0.110* | |
| H11B | −0.5781 | 0.7418 | 0.2736 | 0.110* | |
| H11C | −0.4135 | 0.6990 | 0.3285 | 0.110* | |
| C12 | −0.5115 (5) | 0.9746 (5) | 0.3641 (3) | 0.0704 (11) | |
| H12A | −0.4714 | 0.9220 | 0.4250 | 0.106* | |
| H12B | −0.6324 | 0.9739 | 0.3684 | 0.106* | |
| H12C | −0.4816 | 1.0705 | 0.3592 | 0.106* | |
| C13 | 0.2026 (5) | 0.4709 (4) | 0.2956 (3) | 0.0554 (8) | |
| C14 | 0.1560 (6) | 0.4522 (4) | 0.1882 (3) | 0.0613 (9) | |
| C15 | −0.0198 (8) | 0.5172 (7) | 0.1668 (4) | 0.0987 (18) | |
| H15A | −0.1028 | 0.4767 | 0.2183 | 0.148* | |
| H15B | −0.0419 | 0.4983 | 0.0992 | 0.148* | |
| H15C | −0.0255 | 0.6177 | 0.1693 | 0.148* | |
| C16 | 0.2920 (10) | 0.5217 (8) | 0.1114 (4) | 0.113 (2) | |
| H16A | 0.2806 | 0.5005 | 0.0427 | 0.169* | |
| H16B | 0.4020 | 0.4859 | 0.1301 | 0.169* | |
| H16C | 0.2785 | 0.6225 | 0.1134 | 0.169* | |
| C17 | 0.1623 (8) | 0.2942 (5) | 0.1788 (4) | 0.0875 (15) | |
| H17A | 0.0784 | 0.2520 | 0.2289 | 0.131* | |
| H17B | 0.2725 | 0.2507 | 0.1914 | 0.131* | |
| H17C | 0.1399 | 0.2803 | 0.1102 | 0.131* | |
| N1 | 0.1823 (5) | 0.7673 (4) | 0.6064 (3) | 0.0678 (9) | |
| N2 | 0.1026 (4) | 0.5683 (3) | 0.3481 (2) | 0.0523 (7) | |
| H2 | 0.0079 | 0.5961 | 0.3239 | 0.063* | |
| N3 | −0.2495 (3) | 0.9371 (3) | 0.2384 (2) | 0.0467 (6) | |
| O2 | 0.3244 (5) | 0.4055 (4) | 0.3306 (3) | 0.0946 (12) | |
| S1 | −0.17473 (10) | 0.79230 (10) | 0.41574 (6) | 0.0518 (3) | |
| S2 | 0.08414 (10) | 0.91374 (10) | 0.25296 (7) | 0.0535 (3) |
| C1 | 0.0432 (16) | 0.0523 (17) | 0.0417 (15) | −0.0037 (13) | −0.0063 (12) | −0.0018 (13) |
| C2 | 0.0450 (17) | 0.0487 (17) | 0.0425 (15) | −0.0054 (13) | −0.0070 (13) | −0.0038 (12) |
| C3 | 0.0479 (19) | 0.061 (2) | 0.0522 (18) | 0.0012 (15) | −0.0112 (15) | −0.0045 (15) |
| C4 | 0.055 (2) | 0.083 (3) | 0.055 (2) | −0.0003 (19) | −0.0214 (17) | −0.0078 (18) |
| C5 | 0.058 (2) | 0.064 (2) | 0.0489 (18) | 0.0016 (16) | −0.0091 (15) | −0.0113 (15) |
| C6 | 0.0387 (15) | 0.0442 (15) | 0.0439 (15) | −0.0038 (12) | −0.0051 (12) | −0.0079 (12) |
| C7 | 0.053 (2) | 0.087 (3) | 0.055 (2) | −0.0067 (19) | −0.0119 (16) | 0.0123 (19) |
| C8 | 0.117 (5) | 0.075 (3) | 0.093 (4) | −0.006 (3) | −0.029 (3) | 0.017 (3) |
| C9 | 0.125 (5) | 0.124 (5) | 0.048 (2) | 0.006 (4) | −0.005 (3) | −0.007 (3) |
| C10 | 0.0340 (16) | 0.072 (2) | 0.0564 (19) | −0.0040 (15) | −0.0084 (14) | −0.0128 (16) |
| C11 | 0.054 (2) | 0.082 (3) | 0.090 (3) | −0.021 (2) | −0.011 (2) | −0.019 (2) |
| C12 | 0.046 (2) | 0.097 (3) | 0.070 (2) | 0.007 (2) | −0.0047 (17) | −0.025 (2) |
| C13 | 0.056 (2) | 0.0511 (18) | 0.061 (2) | 0.0001 (15) | −0.0111 (16) | −0.0131 (15) |
| C14 | 0.072 (2) | 0.059 (2) | 0.055 (2) | −0.0088 (18) | −0.0056 (18) | −0.0155 (16) |
| C15 | 0.111 (4) | 0.120 (4) | 0.076 (3) | 0.014 (3) | −0.046 (3) | −0.040 (3) |
| C16 | 0.142 (6) | 0.136 (5) | 0.066 (3) | −0.069 (5) | 0.002 (3) | −0.005 (3) |
| C17 | 0.111 (4) | 0.071 (3) | 0.087 (3) | −0.011 (3) | −0.009 (3) | −0.033 (2) |
| N1 | 0.068 (2) | 0.084 (2) | 0.0559 (18) | −0.0008 (18) | −0.0189 (16) | −0.0206 (16) |
| N2 | 0.0496 (16) | 0.0579 (16) | 0.0520 (15) | 0.0043 (13) | −0.0158 (12) | −0.0134 (13) |
| N3 | 0.0377 (13) | 0.0586 (16) | 0.0447 (14) | −0.0029 (11) | −0.0089 (11) | −0.0055 (11) |
| O2 | 0.090 (2) | 0.098 (2) | 0.102 (2) | 0.042 (2) | −0.041 (2) | −0.045 (2) |
| S1 | 0.0388 (4) | 0.0662 (5) | 0.0473 (5) | −0.0015 (3) | −0.0035 (3) | 0.0026 (4) |
| S2 | 0.0376 (4) | 0.0614 (5) | 0.0600 (5) | −0.0087 (3) | −0.0049 (3) | 0.0029 (4) |
| C1—C5 | 1.386 (5) | C10—C11 | 1.511 (6) |
| C1—C2 | 1.406 (5) | C10—C12 | 1.530 (5) |
| C1—S1 | 1.760 (3) | C10—H10 | 0.9800 |
| C2—N2 | 1.390 (4) | C11—H11A | 0.9600 |
| C2—C3 | 1.395 (5) | C11—H11B | 0.9600 |
| C3—C4 | 1.373 (5) | C11—H11C | 0.9600 |
| C3—H3 | 0.9300 | C12—H12A | 0.9600 |
| C4—N1 | 1.332 (5) | C12—H12B | 0.9600 |
| C4—H4 | 0.9300 | C12—H12C | 0.9600 |
| C5—N1 | 1.336 (5) | C13—O2 | 1.210 (5) |
| C5—H5 | 0.9300 | C13—N2 | 1.361 (5) |
| C6—N3 | 1.331 (4) | C13—C14 | 1.527 (5) |
| C6—S2 | 1.671 (3) | C14—C15 | 1.522 (7) |
| C6—S1 | 1.797 (3) | C14—C17 | 1.523 (6) |
| C7—N3 | 1.489 (5) | C14—C16 | 1.530 (7) |
| C7—C9 | 1.498 (7) | C15—H15A | 0.9600 |
| C7—C8 | 1.509 (7) | C15—H15B | 0.9600 |
| C7—H7 | 0.9800 | C15—H15C | 0.9600 |
| C8—H8A | 0.9600 | C16—H16A | 0.9600 |
| C8—H8B | 0.9600 | C16—H16B | 0.9600 |
| C8—H8C | 0.9600 | C16—H16C | 0.9600 |
| C9—H9A | 0.9600 | C17—H17A | 0.9600 |
| C9—H9B | 0.9600 | C17—H17B | 0.9600 |
| C9—H9C | 0.9600 | C17—H17C | 0.9600 |
| C10—N3 | 1.494 (4) | N2—H2 | 0.8600 |
| C5—C1—C2 | 118.5 (3) | C10—C11—H11C | 109.5 |
| C5—C1—S1 | 117.4 (3) | H11A—C11—H11C | 109.5 |
| C2—C1—S1 | 123.5 (2) | H11B—C11—H11C | 109.5 |
| N2—C2—C3 | 124.4 (3) | C10—C12—H12A | 109.5 |
| N2—C2—C1 | 118.3 (3) | C10—C12—H12B | 109.5 |
| C3—C2—C1 | 117.3 (3) | H12A—C12—H12B | 109.5 |
| C4—C3—C2 | 118.8 (3) | C10—C12—H12C | 109.5 |
| C4—C3—H3 | 120.6 | H12A—C12—H12C | 109.5 |
| C2—C3—H3 | 120.6 | H12B—C12—H12C | 109.5 |
| N1—C4—C3 | 125.0 (3) | O2—C13—N2 | 122.1 (4) |
| N1—C4—H4 | 117.5 | O2—C13—C14 | 121.6 (4) |
| C3—C4—H4 | 117.5 | N2—C13—C14 | 116.2 (3) |
| N1—C5—C1 | 124.3 (4) | C15—C14—C17 | 107.8 (4) |
| N1—C5—H5 | 117.9 | C15—C14—C13 | 114.1 (3) |
| C1—C5—H5 | 117.9 | C17—C14—C13 | 108.3 (4) |
| N3—C6—S2 | 125.8 (2) | C15—C14—C16 | 110.6 (5) |
| N3—C6—S1 | 115.0 (2) | C17—C14—C16 | 110.7 (4) |
| S2—C6—S1 | 119.17 (18) | C13—C14—C16 | 105.3 (4) |
| N3—C7—C9 | 111.2 (4) | C14—C15—H15A | 109.5 |
| N3—C7—C8 | 111.3 (4) | C14—C15—H15B | 109.5 |
| C9—C7—C8 | 114.1 (4) | H15A—C15—H15B | 109.5 |
| N3—C7—H7 | 106.6 | C14—C15—H15C | 109.5 |
| C9—C7—H7 | 106.6 | H15A—C15—H15C | 109.5 |
| C8—C7—H7 | 106.6 | H15B—C15—H15C | 109.5 |
| C7—C8—H8A | 109.5 | C14—C16—H16A | 109.5 |
| C7—C8—H8B | 109.5 | C14—C16—H16B | 109.5 |
| H8A—C8—H8B | 109.5 | H16A—C16—H16B | 109.5 |
| C7—C8—H8C | 109.5 | C14—C16—H16C | 109.5 |
| H8A—C8—H8C | 109.5 | H16A—C16—H16C | 109.5 |
| H8B—C8—H8C | 109.5 | H16B—C16—H16C | 109.5 |
| C7—C9—H9A | 109.5 | C14—C17—H17A | 109.5 |
| C7—C9—H9B | 109.5 | C14—C17—H17B | 109.5 |
| H9A—C9—H9B | 109.5 | H17A—C17—H17B | 109.5 |
| C7—C9—H9C | 109.5 | C14—C17—H17C | 109.5 |
| H9A—C9—H9C | 109.5 | H17A—C17—H17C | 109.5 |
| H9B—C9—H9C | 109.5 | H17B—C17—H17C | 109.5 |
| N3—C10—C11 | 113.1 (3) | C4—N1—C5 | 116.0 (3) |
| N3—C10—C12 | 113.3 (3) | C13—N2—C2 | 129.2 (3) |
| C11—C10—C12 | 114.6 (4) | C13—N2—H2 | 115.4 |
| N3—C10—H10 | 104.9 | C2—N2—H2 | 115.4 |
| C11—C10—H10 | 104.9 | C6—N3—C7 | 118.8 (3) |
| C12—C10—H10 | 104.9 | C6—N3—C10 | 126.5 (3) |
| C10—C11—H11A | 109.5 | C7—N3—C10 | 114.7 (3) |
| C10—C11—H11B | 109.5 | C1—S1—C6 | 104.98 (15) |
| H11A—C11—H11B | 109.5 |
| H··· | ||||
| C4—H4···O2i | 0.93 | 2.54 | 3.447 (5) | 164 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C4—H4⋯O2i | 0.93 | 2.54 | 3.447 (5) | 164 |
Symmetry code: (i) .