Literature DB >> 25309211

Crystal structure of (E)-3-(2,4-di-meth-oxy-phen-yl)-1-(1-hy-droxy-naphthalen-2-yl)prop-2-en-1-one.

Dongsoo Koh1.   

Abstract

In the title compound, C21H18O4, the C=C bond of the central enone group adopts an E conformation. The dihedral angle formed by the benzene ring and the naphthalene ring system is 6.60 (2)°. The meth-oxy groups on the benzene ring are essentially coplanar with the ring; the C-C-O-C torsion angles being 1.6 (2) and -177.1 (1)°. The hy-droxy group attached to the naphthalene ring is involved in an intra-molecular O-H⋯O hydrogen bond. The relative conformation of the two double bonds in the enone group is s-cisoid. In the crystal, weak C-H⋯O hydrogen bonds link the mol-ecules into chains propagating along [010].

Entities:  

Keywords:  benzochalcone; chalcone; crystal structure; enone; naphthalene

Year:  2014        PMID: 25309211      PMCID: PMC4186154          DOI: 10.1107/S1600536814018704

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis and biological properties of chalcone derivatives, see: Fuchigami et al. (2014 ▶); Kim et al. (2014 ▶); Mai et al. (2014 ▶); Smit & D′Na (2014 ▶). For details concerning benzochalcone derivatives, see: Juvale et al. (2013 ▶); Shin et al. (2013 ▶). For related structures, see: Ahn et al. (2013 ▶); Lim & Koh (2013 ▶).

Experimental

Crystal data

C21H18O4 M = 334.35 Monoclinic, a = 14.1148 (9) Å b = 14.7489 (9) Å c = 15.5929 (10) Å β = 92.804 (4)° V = 3242.2 (4) Å3 Z = 8 Cu Kα radiation μ = 0.77 mm−1 T = 147 K 0.19 × 0.12 × 0.08 mm

Data collection

Bruker Kappa APEX DUO CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2007 ▶) T min = 0.669, T max = 0.753 8800 measured reflections 2755 independent reflections 2505 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.095 S = 1.05 2755 reflections 232 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.15 e Å−3 Δρmin = −0.27 e Å−3

Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶). Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S1600536814018704/su2770sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814018704/su2770Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814018704/su2770Isup3.cml Click here for additional data file. . DOI: 10.1107/S1600536814018704/su2770fig1.tif The mol­ecular structure of the title mol­ecule, with atom labelling. The displacement ellipsoids are drawn at the 50% probability level Click here for additional data file. c . DOI: 10.1107/S1600536814018704/su2770fig2.tif A partial view along the c axis of the crystal packing of the title compound. The C—H⋯O hydrogen bonds are shown as dashed lines (see Table 1 for details; H atoms not involved in hydrogen bonding have been omitted for clarity). CCDC reference: 1019819 Additional supporting information: crystallographic information; 3D view; checkCIF report
C21H18O4F(000) = 1408
Mr = 334.35Dx = 1.370 Mg m3
Monoclinic, C2/cCu Kα radiation, λ = 1.54178 Å
Hall symbol: -C 2ycCell parameters from 4341 reflections
a = 14.1148 (9) Åθ = 4.3–66.4°
b = 14.7489 (9) ŵ = 0.77 mm1
c = 15.5929 (10) ÅT = 147 K
β = 92.804 (4)°Needle, orange
V = 3242.2 (4) Å30.19 × 0.12 × 0.08 mm
Z = 8
Bruker Kappa APEX DUO CCD diffractometer2755 independent reflections
Radiation source: Bruker ImuS2505 reflections with I > 2σ(I)
Multi-layer optics monochromatorRint = 0.026
φ and ω scansθmax = 66.5°, θmin = 4.3°
Absorption correction: multi-scan (SADABS; Bruker, 2007)h = −16→16
Tmin = 0.669, Tmax = 0.753k = −17→17
8800 measured reflectionsl = −13→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.095H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.049P)2 + 1.958P] where P = (Fo2 + 2Fc2)/3
2755 reflections(Δ/σ)max = 0.001
232 parametersΔρmax = 0.15 e Å3
0 restraintsΔρmin = −0.27 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.46036 (6)0.17828 (6)1.03233 (6)0.0275 (2)
O20.19523 (6)0.11183 (7)0.85783 (7)0.0345 (3)
O30.17234 (6)−0.10692 (6)0.63594 (6)0.0266 (2)
O40.59612 (6)0.24290 (6)1.12130 (6)0.0251 (2)
C10.51556 (9)0.13224 (8)0.98872 (8)0.0210 (3)
C20.47622 (9)0.07880 (8)0.91593 (8)0.0223 (3)
H2A0.51730.04320.88320.027*
C30.38286 (9)0.07983 (8)0.89525 (8)0.0213 (3)
H3A0.34540.11770.92940.026*
C40.33198 (8)0.03012 (8)0.82693 (8)0.0201 (3)
C50.23466 (9)0.04712 (8)0.80855 (8)0.0226 (3)
C60.18419 (9)0.00040 (9)0.74439 (8)0.0240 (3)
H6A0.11900.01340.73240.029*
C70.22926 (9)−0.06572 (9)0.69744 (8)0.0215 (3)
C80.32474 (9)−0.08523 (9)0.71418 (8)0.0233 (3)
H8A0.3557−0.13020.68220.028*
C90.37358 (9)−0.03735 (9)0.77878 (8)0.0222 (3)
H9A0.4386−0.05120.79080.027*
C100.09670 (11)0.13031 (13)0.84355 (13)0.0516 (5)
H10A0.07720.17630.88450.077*
H10B0.06030.07460.85140.077*
H10C0.08470.15280.78490.077*
C110.21279 (10)−0.17857 (10)0.58794 (9)0.0339 (3)
H11A0.1648−0.20290.54660.051*
H11B0.2349−0.22690.62720.051*
H11C0.2665−0.15510.55710.051*
C120.61749 (8)0.13277 (8)1.01100 (8)0.0193 (3)
C130.65294 (8)0.18928 (8)1.07709 (7)0.0190 (3)
C140.75210 (8)0.19224 (8)1.10073 (7)0.0193 (3)
C150.78867 (9)0.25063 (8)1.16617 (8)0.0220 (3)
H15A0.74700.28931.19520.026*
C160.88385 (9)0.25175 (9)1.18786 (8)0.0251 (3)
H16A0.90810.29161.23150.030*
C170.94584 (9)0.19415 (9)1.14567 (8)0.0259 (3)
H17A1.01170.19461.16160.031*
C180.91205 (9)0.13741 (9)1.08185 (8)0.0246 (3)
H18A0.95490.09911.05370.030*
C190.81422 (9)0.13491 (8)1.05720 (8)0.0203 (3)
C200.77706 (9)0.07710 (9)0.99071 (8)0.0228 (3)
H20A0.81850.03820.96170.027*
C210.68288 (9)0.07699 (8)0.96827 (8)0.0216 (3)
H21A0.65990.03870.92290.026*
H4O0.5337 (15)0.2284 (14)1.0965 (13)0.059 (6)*
U11U22U33U12U13U23
O10.0193 (4)0.0320 (5)0.0312 (5)0.0025 (4)−0.0004 (4)−0.0075 (4)
O20.0217 (5)0.0350 (6)0.0455 (6)0.0096 (4)−0.0106 (4)−0.0179 (5)
O30.0286 (5)0.0265 (5)0.0242 (5)−0.0033 (4)−0.0046 (4)−0.0038 (4)
O40.0202 (5)0.0282 (5)0.0267 (5)0.0035 (4)−0.0002 (4)−0.0078 (4)
C10.0217 (6)0.0192 (6)0.0221 (6)−0.0003 (5)0.0010 (5)0.0028 (5)
C20.0208 (6)0.0227 (6)0.0234 (6)−0.0006 (5)0.0006 (5)−0.0010 (5)
C30.0229 (6)0.0184 (6)0.0224 (6)−0.0006 (5)−0.0001 (5)0.0019 (5)
C40.0206 (6)0.0188 (6)0.0208 (6)−0.0020 (5)−0.0004 (5)0.0037 (5)
C50.0228 (6)0.0193 (6)0.0254 (6)0.0018 (5)−0.0015 (5)0.0003 (5)
C60.0207 (6)0.0238 (7)0.0270 (7)0.0004 (5)−0.0052 (5)0.0009 (5)
C70.0251 (6)0.0212 (6)0.0179 (6)−0.0055 (5)−0.0019 (5)0.0038 (5)
C80.0251 (6)0.0234 (7)0.0217 (6)−0.0009 (5)0.0046 (5)0.0000 (5)
C90.0187 (6)0.0255 (7)0.0224 (6)−0.0019 (5)0.0012 (5)0.0026 (5)
C100.0254 (8)0.0575 (11)0.0703 (12)0.0182 (7)−0.0136 (7)−0.0335 (9)
C110.0387 (8)0.0336 (8)0.0291 (7)−0.0041 (6)−0.0006 (6)−0.0114 (6)
C120.0201 (6)0.0181 (6)0.0197 (6)−0.0007 (5)−0.0004 (5)0.0023 (5)
C130.0218 (6)0.0168 (6)0.0184 (6)0.0011 (5)0.0020 (5)0.0020 (5)
C140.0209 (6)0.0189 (6)0.0178 (6)−0.0012 (5)−0.0009 (5)0.0037 (5)
C150.0249 (6)0.0215 (6)0.0195 (6)−0.0004 (5)−0.0003 (5)0.0008 (5)
C160.0266 (7)0.0264 (7)0.0218 (6)−0.0045 (5)−0.0051 (5)0.0008 (5)
C170.0196 (6)0.0320 (7)0.0254 (6)−0.0019 (5)−0.0043 (5)0.0039 (5)
C180.0204 (6)0.0277 (7)0.0255 (7)0.0022 (5)0.0000 (5)0.0020 (5)
C190.0211 (6)0.0207 (6)0.0191 (6)0.0001 (5)−0.0004 (5)0.0045 (5)
C200.0223 (6)0.0224 (6)0.0237 (6)0.0030 (5)0.0019 (5)−0.0023 (5)
C210.0231 (6)0.0204 (6)0.0211 (6)−0.0008 (5)−0.0012 (5)−0.0017 (5)
O1—C11.2580 (15)C10—H10B0.9800
O2—C51.3612 (16)C10—H10C0.9800
O2—C101.4239 (17)C11—H11A0.9800
O3—C71.3635 (15)C11—H11B0.9800
O3—C111.4299 (17)C11—H11C0.9800
O4—C131.3408 (15)C12—C131.3987 (17)
O4—H4O0.97 (2)C12—C211.4258 (17)
C1—C121.4634 (17)C13—C141.4306 (17)
C1—C21.4683 (18)C14—C151.4133 (17)
C2—C31.3414 (18)C14—C191.4152 (17)
C2—H2A0.9500C15—C161.3693 (18)
C3—C41.4537 (17)C15—H15A0.9500
C3—H3A0.9500C16—C171.4059 (19)
C4—C91.3936 (18)C16—H16A0.9500
C4—C51.4119 (17)C17—C181.3680 (19)
C5—C61.3832 (18)C17—H17A0.9500
C6—C71.3919 (18)C18—C191.4156 (17)
C6—H6A0.9500C18—H18A0.9500
C7—C81.3902 (18)C19—C201.4227 (18)
C8—C91.3858 (18)C20—C211.3580 (17)
C8—H8A0.9500C20—H20A0.9500
C9—H9A0.9500C21—H21A0.9500
C10—H10A0.9800
C5—O2—C10117.97 (11)O3—C11—H11A109.5
C7—O3—C11117.44 (10)O3—C11—H11B109.5
C13—O4—H4O102.7 (12)H11A—C11—H11B109.5
O1—C1—C12119.77 (11)O3—C11—H11C109.5
O1—C1—C2119.13 (11)H11A—C11—H11C109.5
C12—C1—C2121.11 (11)H11B—C11—H11C109.5
C3—C2—C1120.65 (11)C13—C12—C21118.15 (11)
C3—C2—H2A119.7C13—C12—C1119.35 (11)
C1—C2—H2A119.7C21—C12—C1122.50 (11)
C2—C3—C4127.94 (12)O4—C13—C12121.93 (11)
C2—C3—H3A116.0O4—C13—C14116.85 (11)
C4—C3—H3A116.0C12—C13—C14121.22 (11)
C9—C4—C5116.67 (11)C15—C14—C19119.82 (11)
C9—C4—C3123.29 (11)C15—C14—C13121.53 (11)
C5—C4—C3120.00 (11)C19—C14—C13118.65 (11)
O2—C5—C6123.18 (11)C16—C15—C14120.33 (12)
O2—C5—C4115.50 (11)C16—C15—H15A119.8
C6—C5—C4121.32 (12)C14—C15—H15A119.8
C5—C6—C7119.80 (11)C15—C16—C17120.18 (12)
C5—C6—H6A120.1C15—C16—H16A119.9
C7—C6—H6A120.1C17—C16—H16A119.9
O3—C7—C8124.91 (11)C18—C17—C16120.48 (12)
O3—C7—C6114.42 (11)C18—C17—H17A119.8
C8—C7—C6120.67 (11)C16—C17—H17A119.8
C9—C8—C7118.31 (12)C17—C18—C19120.94 (12)
C9—C8—H8A120.8C17—C18—H18A119.5
C7—C8—H8A120.8C19—C18—H18A119.5
C8—C9—C4123.21 (12)C14—C19—C18118.24 (11)
C8—C9—H9A118.4C14—C19—C20119.51 (11)
C4—C9—H9A118.4C18—C19—C20122.24 (11)
O2—C10—H10A109.5C21—C20—C19120.66 (11)
O2—C10—H10B109.5C21—C20—H20A119.7
H10A—C10—H10B109.5C19—C20—H20A119.7
O2—C10—H10C109.5C20—C21—C12121.79 (11)
H10A—C10—H10C109.5C20—C21—H21A119.1
H10B—C10—H10C109.5C12—C21—H21A119.1
O1—C1—C2—C30.91 (18)C2—C1—C12—C21−4.86 (18)
C12—C1—C2—C3−179.00 (11)C21—C12—C13—O4−179.06 (10)
C1—C2—C3—C4−178.69 (11)C1—C12—C13—O40.41 (17)
C2—C3—C4—C99.1 (2)C21—C12—C13—C140.81 (17)
C2—C3—C4—C5−173.07 (12)C1—C12—C13—C14−179.73 (10)
C10—O2—C5—C61.6 (2)O4—C13—C14—C15−1.54 (17)
C10—O2—C5—C4−178.52 (14)C12—C13—C14—C15178.59 (11)
C9—C4—C5—O2178.52 (11)O4—C13—C14—C19178.34 (10)
C3—C4—C5—O20.59 (17)C12—C13—C14—C19−1.53 (17)
C9—C4—C5—C6−1.56 (18)C19—C14—C15—C16−0.24 (18)
C3—C4—C5—C6−179.48 (11)C13—C14—C15—C16179.64 (11)
O2—C5—C6—C7−179.17 (12)C14—C15—C16—C17−0.57 (19)
C4—C5—C6—C70.91 (19)C15—C16—C17—C180.90 (19)
C11—O3—C7—C83.18 (17)C16—C17—C18—C19−0.38 (19)
C11—O3—C7—C6−177.12 (11)C15—C14—C19—C180.74 (17)
C5—C6—C7—O3−179.88 (11)C13—C14—C19—C18−179.15 (11)
C5—C6—C7—C8−0.17 (19)C15—C14—C19—C20−179.25 (11)
O3—C7—C8—C9179.82 (11)C13—C14—C19—C200.86 (17)
C6—C7—C8—C90.13 (18)C17—C18—C19—C14−0.43 (18)
C7—C8—C9—C4−0.87 (19)C17—C18—C19—C20179.56 (12)
C5—C4—C9—C81.56 (18)C14—C19—C20—C210.52 (18)
C3—C4—C9—C8179.41 (11)C18—C19—C20—C21−179.47 (12)
O1—C1—C12—C13−4.21 (17)C19—C20—C21—C12−1.29 (19)
C2—C1—C12—C13175.70 (11)C13—C12—C21—C200.62 (18)
O1—C1—C12—C21175.23 (11)C1—C12—C21—C20−178.83 (12)
D—H···AD—HH···AD···AD—H···A
O4—H4O···O10.97 (2)1.59 (2)2.499 (1)155.1 (19)
C10—H10A···O1i0.982.573.538 (2)167
C11—H11B···O2ii0.982.583.442 (2)147
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O4—H4O⋯O10.97 (2)1.59 (2)2.499 (1)155.1 (19)
C10—H10A⋯O1i 0.982.573.538 (2)167
C11—H11B⋯O2ii 0.982.583.442 (2)147

Symmetry codes: (i) ; (ii) .

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