Literature DB >> 25309206

Crystal structure of (E)-2-cyano-3-(12-methyl-12H-benzo[b]pheno-thia-zin-11-yl)acrylic acid.

Motonori Watanabe1, Tatsumi Ishihara2.   

Abstract

In the title compound, C21H14N2O2S, a donor-acceptor type of benzo[b]pheno-thia-zine (bpz) derivative, the thia-zine ring adopts a boat conformation and the bond-angle sum at the N atom is 360.0°. The dihedral angle between the benzene ring and the naphthelene ring system fused to the thia-zine ring is 32.76 (5)°. In the crystal, carb-oxy-lic-acid inversion dimers linked by pairs of O-H⋯O hydrogen bonds generate R 2 (2)(8) loops. Aromatic π-π stacking [shortest centroid-centroid separaton = 3.5242 (13)Å] consolidates the structure and very weak C-H⋯O and C-H⋯N inter-actions also occur.

Entities:  

Keywords:  benzo[b]pheno­thia­zine derivative; crystal structure; hydrogen bonding; inversion dimers; π–π stacking

Year:  2014        PMID: 25309206      PMCID: PMC4186111          DOI: 10.1107/S1600536814018388

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Bell et al. (1968 ▶), van de Waal & Feil (1977 ▶), Sun et al. (2004 ▶); Harrison et al. (2007 ▶). For applications of the title compound in dye-sensitized solar cells, see: Watanabe et al. (2014 ▶).

Experimental

Crystal data

C21H14N2O2S M = 358.40 Triclinic, a = 6.7915 (17) Å b = 9.196 (3) Å c = 13.941 (3) Å α = 95.831 (13)° β = 101.214 (10)° γ = 90.850 (15)° V = 849.1 (4) Å3 Z = 2 Mo Kα radiation μ = 0.21 mm−1 T = 123 K 0.40 × 0.40 × 0.15 mm

Data collection

Rigaku R-AXIS RAPID CCD diffractometer 14164 measured reflections 3877 independent reflections 3663 reflections with I > 2σ(I) R int = 0.020

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.100 S = 1.06 3877 reflections 290 parameters H-atom parameters constrained Δρmax = 0.29 e Å−3 Δρmin = −0.40 e Å−3

Data collection: RAPID-AUTO (Rigaku, 1998 ▶); cell refinement: RAPID-AUTO; data reduction: RAPID-AUTO; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: Yadokari-XG 2009 (Wakita, 2001 ▶; Kabuto et al., 2009 ▶) and POV-RAY (Persistence of Vision Team, 2004 ▶). Crystal structure: contains datablock(s) General, I. DOI: 10.1107/S1600536814018388/hb7264sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814018388/hb7264Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814018388/hb7264Isup3.cml Click here for additional data file. 21 14 2 2 . DOI: 10.1107/S1600536814018388/hb7264fig1.tif The mol­ecular structure of C21H14N2O2S with displacement ellipsoids drawn at the 50% probability level. Click here for additional data file. . DOI: 10.1107/S1600536814018388/hb7264fig2.tif Inter­molecular hydrogen bonding O1—H14O2′ (1.520 Å) in the two mol­ecule structure of carb­oxy­lic acid moiety. Click here for additional data file. 21 14 2 2 . DOI: 10.1107/S1600536814018388/hb7264fig3.tif Packing diagram of C21H14N2O2S. CCDC reference: 1018980 Additional supporting information: crystallographic information; 3D view; checkCIF report
C21H14N2O2SF(000) = 372
Mr = 358.40Dx = 1.402 Mg m3
Triclinic, P1Melting point: 351 K
a = 6.7915 (17) ÅMo Kα radiation, λ = 0.71075 Å
b = 9.196 (3) ÅCell parameters from 14164 reflections
c = 13.941 (3) Åθ = 3.0–27.5°
α = 95.831 (13)°µ = 0.21 mm1
β = 101.214 (10)°T = 123 K
γ = 90.850 (15)°Block, dark red
V = 849.1 (4) Å30.40 × 0.40 × 0.15 mm
Z = 2
Rigaku R-AXIS RAPID CCD diffractometerRint = 0.020
ω/2θ scansθmax = 27.5°, θmin = 3.0°
14164 measured reflectionsh = −8→8
3877 independent reflectionsk = −11→11
3663 reflections with I > 2σ(I)l = −18→16
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036H-atom parameters constrained
wR(F2) = 0.100w = 1/[σ2(Fo2) + (0.0609P)2 + 0.2744P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max < 0.001
3877 reflectionsΔρmax = 0.29 e Å3
290 parametersΔρmin = −0.40 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
H20.953 (3)−0.333 (2)0.4654 (13)0.041 (5)*
H30.968 (3)−0.526 (2)0.3462 (15)0.056 (6)*
C10.71497 (19)−0.23569 (15)0.38906 (10)0.0297 (3)
H100.213 (2)−0.0357 (18)0.3396 (12)0.029 (4)*
C20.8586 (2)−0.34194 (17)0.40418 (12)0.0371 (3)
C30.8644 (2)−0.45592 (16)0.33152 (13)0.0402 (3)
C40.7256 (2)−0.46500 (15)0.24404 (12)0.0353 (3)
C50.12589 (17)0.17296 (15)−0.11405 (9)0.0274 (3)
H50.290 (2)−0.2245 (18)−0.0436 (12)0.033 (4)*
H60.163 (2)−0.0447 (18)−0.1546 (12)0.031 (4)*
H90.238 (2)0.3227 (18)0.1163 (12)0.031 (4)*
C60.22142 (17)0.24648 (13)0.06076 (9)0.0223 (2)
C70.34176 (15)0.06021 (12)0.17662 (8)0.0173 (2)
S10.39308 (5)−0.37579 (3)0.12102 (2)0.02878 (11)
O10.65112 (12)0.36226 (9)0.47776 (6)0.02296 (18)
H70.075 (3)0.1979 (19)−0.1817 (13)0.038 (4)*
H10.714 (2)−0.1535 (19)0.4397 (12)0.029 (4)*
H80.124 (3)0.386 (2)−0.0451 (13)0.040 (4)*
C80.24793 (16)−0.00669 (13)−0.00306 (8)0.0202 (2)
H40.725 (3)−0.541 (2)0.1909 (13)0.041 (5)*
C90.26789 (15)0.10113 (12)0.07897 (8)0.0181 (2)
O20.35247 (13)0.41863 (10)0.39083 (6)0.0275 (2)
H140.353 (3)0.507 (2)0.4467 (13)0.041*
N10.42827 (14)−0.13630 (10)0.28349 (7)0.0208 (2)
C100.38246 (15)−0.08478 (12)0.19057 (8)0.0177 (2)
H130.246 (2)0.2398 (16)0.2575 (11)0.023 (3)*
C110.35977 (16)0.17829 (12)0.25662 (8)0.0186 (2)
C120.50856 (16)0.34153 (12)0.40510 (8)0.0185 (2)
N20.86564 (16)0.10083 (13)0.34623 (9)0.0336 (3)
H110.312 (2)−0.1618 (18)0.3995 (12)0.031 (4)*
H120.420 (3)−0.003 (2)0.4129 (13)0.041 (5)*
C130.30285 (16)−0.15078 (13)0.01314 (8)0.0219 (2)
C140.36473 (16)−0.18954 (12)0.10592 (8)0.0201 (2)
C150.17442 (17)0.03230 (15)−0.09906 (8)0.0250 (2)
C160.15205 (18)0.28132 (14)−0.03332 (9)0.0266 (3)
C170.57900 (18)−0.36047 (13)0.22895 (10)0.0262 (2)
C180.57427 (17)−0.24412 (12)0.30077 (9)0.0231 (2)
C190.33548 (19)−0.08052 (14)0.36491 (9)0.0248 (2)
C200.51890 (16)0.21732 (12)0.32950 (8)0.0186 (2)
C210.70959 (17)0.14883 (13)0.33855 (8)0.0222 (2)
U11U22U33U12U13U23
C10.0244 (6)0.0300 (6)0.0354 (7)0.0032 (5)0.0037 (5)0.0107 (5)
C20.0239 (6)0.0388 (7)0.0513 (8)0.0065 (5)0.0052 (6)0.0218 (6)
C30.0290 (6)0.0339 (7)0.0655 (10)0.0136 (5)0.0183 (6)0.0231 (7)
C40.0344 (7)0.0229 (6)0.0559 (9)0.0083 (5)0.0227 (6)0.0106 (6)
C50.0187 (5)0.0433 (7)0.0200 (5)−0.0067 (5)0.0017 (4)0.0078 (5)
C60.0189 (5)0.0240 (6)0.0231 (5)−0.0022 (4)0.0023 (4)0.0017 (4)
C70.0140 (4)0.0198 (5)0.0168 (5)−0.0007 (4)0.0021 (4)−0.0026 (4)
S10.03269 (18)0.01645 (16)0.03660 (19)−0.00299 (11)0.00977 (13)−0.00517 (11)
O10.0245 (4)0.0230 (4)0.0180 (4)0.0017 (3)−0.0007 (3)−0.0045 (3)
C80.0143 (4)0.0278 (6)0.0176 (5)−0.0054 (4)0.0043 (4)−0.0026 (4)
C90.0130 (4)0.0223 (5)0.0177 (5)−0.0028 (4)0.0019 (4)−0.0009 (4)
O20.0262 (4)0.0258 (4)0.0262 (4)0.0094 (3)−0.0004 (3)−0.0080 (3)
N10.0208 (4)0.0211 (5)0.0207 (4)0.0053 (4)0.0046 (4)0.0015 (3)
C100.0137 (4)0.0198 (5)0.0186 (5)−0.0008 (4)0.0034 (4)−0.0020 (4)
C110.0195 (5)0.0178 (5)0.0179 (5)0.0024 (4)0.0034 (4)−0.0003 (4)
C120.0197 (5)0.0177 (5)0.0170 (5)0.0013 (4)0.0028 (4)−0.0012 (4)
N20.0236 (5)0.0391 (6)0.0338 (6)0.0074 (4)0.0017 (4)−0.0098 (5)
C130.0183 (5)0.0251 (6)0.0210 (5)−0.0056 (4)0.0065 (4)−0.0083 (4)
C140.0174 (5)0.0178 (5)0.0247 (5)−0.0024 (4)0.0065 (4)−0.0042 (4)
C150.0176 (5)0.0392 (7)0.0171 (5)−0.0080 (4)0.0042 (4)−0.0018 (5)
C160.0204 (5)0.0320 (6)0.0276 (6)−0.0026 (4)0.0024 (4)0.0089 (5)
C170.0241 (5)0.0197 (5)0.0381 (6)0.0017 (4)0.0131 (5)0.0055 (5)
C180.0191 (5)0.0209 (5)0.0312 (6)0.0027 (4)0.0077 (4)0.0066 (4)
C190.0270 (6)0.0275 (6)0.0218 (5)0.0055 (5)0.0086 (4)0.0035 (4)
C200.0197 (5)0.0177 (5)0.0176 (5)0.0020 (4)0.0034 (4)−0.0026 (4)
C210.0218 (5)0.0226 (5)0.0195 (5)0.0005 (4)0.0018 (4)−0.0064 (4)
C1—C21.3933 (18)C8—C151.4185 (16)
C1—C181.3982 (18)C8—C91.4192 (15)
C1—H10.982 (17)O2—C121.2786 (14)
C2—C31.388 (2)O2—H141.063 (18)
C2—H20.959 (18)N1—C101.4042 (14)
C3—C41.383 (2)N1—C181.4174 (14)
C3—H30.97 (2)N1—C191.4553 (14)
C4—C171.3956 (17)C10—C141.4301 (15)
C4—H40.963 (19)C11—C201.3478 (15)
C5—C151.366 (2)C11—H130.964 (15)
C5—C161.4072 (19)C12—C201.4855 (15)
C5—H70.990 (17)N2—C211.1440 (16)
C6—C161.3764 (17)C13—C141.3650 (17)
C6—C91.4145 (16)C13—H50.978 (17)
C6—H90.978 (17)C15—H60.985 (17)
C7—C101.3908 (16)C16—H81.006 (18)
C7—C91.4458 (15)C17—C181.3942 (18)
C7—C111.4611 (15)C19—H100.958 (16)
S1—C141.7556 (13)C19—H110.957 (17)
S1—C171.7581 (14)C19—H121.013 (19)
O1—C121.2544 (14)C20—C211.4376 (15)
C8—C131.4101 (17)
C2—C1—C18120.09 (13)C20—C11—C7128.50 (10)
C2—C1—H1120.2 (9)C20—C11—H13114.1 (9)
C18—C1—H1119.7 (9)C7—C11—H13117.3 (9)
C3—C2—C1120.34 (14)O1—C12—O2125.12 (10)
C3—C2—H2121.5 (11)O1—C12—C20118.13 (10)
C1—C2—H2118.2 (11)O2—C12—C20116.75 (9)
C4—C3—C2119.87 (12)C14—C13—C8121.34 (10)
C4—C3—H3123.7 (12)C14—C13—H5120.0 (10)
C2—C3—H3116.5 (12)C8—C13—H5118.6 (10)
C3—C4—C17120.17 (14)C13—C14—C10121.42 (10)
C3—C4—H4123.1 (11)C13—C14—S1118.47 (8)
C17—C4—H4116.8 (11)C10—C14—S1119.66 (9)
C15—C5—C16119.59 (11)C5—C15—C8120.96 (11)
C15—C5—H7119.6 (10)C5—C15—H6121.2 (9)
C16—C5—H7120.8 (10)C8—C15—H6117.8 (9)
C16—C6—C9121.02 (11)C6—C16—C5120.73 (12)
C16—C6—H9119.9 (9)C6—C16—H8119.9 (10)
C9—C6—H9119.1 (9)C5—C16—H8119.4 (10)
C10—C7—C9120.36 (9)C18—C17—C4120.36 (13)
C10—C7—C11123.92 (10)C18—C17—S1118.84 (9)
C9—C7—C11115.66 (10)C4—C17—S1120.77 (11)
C14—S1—C1799.34 (6)C17—C18—C1119.14 (11)
C13—C8—C15121.48 (10)C17—C18—N1119.89 (11)
C13—C8—C9118.85 (10)C1—C18—N1120.97 (11)
C15—C8—C9119.67 (11)N1—C19—H10109.2 (9)
C6—C9—C8117.97 (10)N1—C19—H11107.3 (10)
C6—C9—C7122.69 (10)H10—C19—H11111.2 (14)
C8—C9—C7119.29 (10)N1—C19—H12114.0 (10)
C12—O2—H14113.7 (10)H10—C19—H12106.4 (14)
C10—N1—C18119.48 (9)H11—C19—H12108.7 (14)
C10—N1—C19122.62 (9)C11—C20—C21123.98 (10)
C18—N1—C19117.88 (9)C11—C20—C12120.73 (10)
C7—C10—N1123.61 (9)C21—C20—C12115.25 (9)
C7—C10—C14118.54 (10)N2—C21—C20176.72 (13)
N1—C10—C14117.73 (10)
C18—C1—C2—C30.6 (2)C7—C10—C14—S1−174.34 (8)
C1—C2—C3—C4−0.7 (2)N1—C10—C14—S11.83 (13)
C2—C3—C4—C17−0.4 (2)C17—S1—C14—C13152.24 (9)
C16—C6—C9—C82.30 (16)C17—S1—C14—C10−35.38 (10)
C16—C6—C9—C7179.77 (10)C16—C5—C15—C80.99 (17)
C13—C8—C9—C6176.94 (9)C13—C8—C15—C5−178.54 (10)
C15—C8—C9—C6−2.82 (15)C9—C8—C15—C51.22 (16)
C13—C8—C9—C7−0.62 (15)C9—C6—C16—C5−0.12 (18)
C15—C8—C9—C7179.61 (9)C15—C5—C16—C6−1.56 (18)
C10—C7—C9—C6179.09 (9)C3—C4—C17—C181.62 (19)
C11—C7—C9—C61.88 (15)C3—C4—C17—S1−176.53 (10)
C10—C7—C9—C8−3.47 (15)C14—S1—C17—C1836.16 (10)
C11—C7—C9—C8179.32 (9)C14—S1—C17—C4−145.67 (10)
C9—C7—C10—N1−171.10 (9)C4—C17—C18—C1−1.66 (17)
C11—C7—C10—N15.86 (16)S1—C17—C18—C1176.53 (9)
C9—C7—C10—C144.83 (15)C4—C17—C18—N1178.19 (11)
C11—C7—C10—C14−178.20 (9)S1—C17—C18—N1−3.63 (15)
C18—N1—C10—C7−142.33 (11)C2—C1—C18—C170.53 (18)
C19—N1—C10—C735.94 (16)C2—C1—C18—N1−179.31 (11)
C18—N1—C10—C1441.71 (14)C10—N1—C18—C17−41.32 (15)
C19—N1—C10—C14−140.02 (11)C19—N1—C18—C17140.33 (11)
C10—C7—C11—C2053.51 (17)C10—N1—C18—C1138.52 (11)
C9—C7—C11—C20−129.39 (12)C19—N1—C18—C1−39.83 (16)
C15—C8—C13—C14−176.93 (10)C7—C11—C20—C212.65 (19)
C9—C8—C13—C143.31 (16)C7—C11—C20—C12−179.85 (10)
C8—C13—C14—C10−1.94 (16)O1—C12—C20—C11171.53 (10)
C8—C13—C14—S1170.30 (8)O2—C12—C20—C11−7.97 (16)
C7—C10—C14—C13−2.19 (15)O1—C12—C20—C21−10.77 (15)
N1—C10—C14—C13173.98 (10)O2—C12—C20—C21169.73 (10)
D—H···AD—HH···AD···AD—H···A
O2—H14···O1i1.063 (18)1.524 (18)2.5856 (13)176.8 (16)
C19—H10···N2ii0.958 (16)2.699 (16)3.5991 (18)156.8 (13)
C19—H11···O1iii0.957 (17)2.623 (17)3.5518 (17)163.7 (13)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O2—H14⋯O1i 1.063 (18)1.524 (18)2.5856 (13)176.8 (16)
C19—H10⋯N2ii 0.958 (16)2.699 (16)3.5991 (18)156.8 (13)
C19—H11⋯O1iii 0.957 (17)2.623 (17)3.5518 (17)163.7 (13)

Symmetry codes: (i) ; (ii) ; (iii) .

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