| Literature DB >> 25309167 |
Ana María Atria1, Maria Teresa Garland2, Ricardo Baggio3.
Abstract
4,4'-(Disulfanediyl)dibutanoic acid (<span class="Chemical">dtba) and 4,4'-bipyridine (4,4'-bpy) crystallize in an 1:1 ratio, leading to the title co-crystal with composition C8H14O4S2·C10H8N2. A distinctive feature of the crystal structure is the geometry of the dtba moiety, which appears to be stretched [with a 9.98 (1) Å span between outermost carbons] and acts as an hydrogen-bonding connector, forming linear chains along [-211] with the 4,4'-bpy moiety by way of O-H⋯N hydrogen bonds and C-H⋯O interactions. The influence of the mol-ecular shape on the hydrogen-bonding pattern is analysed by comparing the title compound and two other 4,4'-bpy co-crystals with closely related mol-ecules of similar formulation but different geometry, showing the way in which this correlates with the packing arrangement.Entities:
Keywords: co-crystal; crystal structure; hydrogen-bonding disposition
Year: 2014 PMID: 25309167 PMCID: PMC4186179 DOI: 10.1107/S1600536814018558
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
Figure 1Top: the asymmetric unit of (I), showing the H—O⋯N linkages as dashed lines. Displacement ellipsoids are drawn at the 40% probability level. Bottom: the least-squares superposition of one dtba molecule and its C2 image, showing the pseudo-symmetry in its central core.
Selected geometric parameters (Å, °)
| C1 | 1.513 (3) | C8 | 1.497 (3) |
| C2 | 1.487 (4) | C7 | 1.507 (3) |
| C3 | 1.522 (3) | C6 | 1.522 (3) |
| C4 | 1.811 (3) | S2 | 1.805 (3) |
| C1 | 1.309 (3) | O3 | 1.325 (3) |
| C1 | 1.198 (3) | O4 | 1.197 (3) |
| S1 | 2.0369 (14) | ||
| C2 | −66.2 (3) | S2 | −67.6 (2) |
| C3 | −68.2 (2) | S1 | −67.67 (19) |
| O2 | −28.2 (4) | C6 | 4.3 (4) |
| C1 | −165.0 (2) | C5 | 178.3 (2) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1 | 0.85 (1) | 1.83 (1) | 2.661 (3) | 163 (3) |
| O3 | 0.86 (1) | 1.80 (1) | 2.637 (3) | 162 (3) |
| C9 | 0.93 | 2.49 | 3.404 (3) | 167 |
Symmetry codes: (i) ; (ii) .
Figure 2A packing view of (I), showing the slabs formed by neighbouring chains connected by C—H⋯O contacts (shown as dashed lines).
Figure 3Packing view of (I) at right angles to the view in Fig. 2 ▶, showing the slabs in projection (one of them has been hightlighted). Single dashed lines denote the C—H⋯O bonds. The C—O⋯π contacts linking the slabs into a three-dimensional structure are shown as double dashed lines.
Figure 4The three different molecular shapes for tdga, tdpa and dtba, and the packing arrangements they give rise to, as described in the text.
Experimental details
| Crystal data | |
| Chemical formula | C8H14O4S2·C10H8N2 |
|
| 394.49 |
| Crystal system, space group | Triclinic, |
| Temperature (K) | 297 |
|
| 5.154 (3), 11.124 (7), 17.256 (11) |
| α, β, γ (°) | 79.096 (10), 87.126 (10), 85.030 (12) |
|
| 967.3 (10) |
|
| 2 |
| Radiation type | Mo |
| μ (mm−1) | 0.30 |
| Crystal size (mm) | 0.23 × 0.14 × 0.11 |
| Data collection | |
| Diffractometer | Bruker |
| Absorption correction | Multi-scan ( |
|
| 0.94, 0.98 |
| No. of measured, independent and observed [ | 8306, 4185, 2376 |
|
| 0.031 |
| (sin θ/λ)max (Å−1) | 0.656 |
| Refinement | |
|
| 0.048, 0.131, 0.91 |
| No. of reflections | 4185 |
| No. of parameters | 243 |
| No. of restraints | 2 |
| H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
| Δρmax, Δρmin (e Å−3) | 0.26, −0.16 |
Computer programs: SMART (Bruker, 2001 ▶), SAINT (Bruker, 2002 ▶), SHELXS97, SHELXL97 and SHELXTL (Sheldrick, 2008b ▶) and PLATON (Spek, 2009 ▶).
| C8H14O4S2·C10H8N2 | |
| Triclinic, | |
| Mo | |
| Cell parameters from 1445 reflections | |
| θ = 2.4–21.1° | |
| α = 79.096 (10)° | µ = 0.30 mm−1 |
| β = 87.126 (10)° | |
| γ = 85.030 (12)° | Block, colourless |
| 0.23 × 0.14 × 0.11 mm |
| Bruker SMART CCD area detector diffractometer | 4185 independent reflections |
| Radiation source: fine-focus sealed tube | 2376 reflections with |
| Graphite monochromator | |
| CCD rotation images, thin slices scans | θmax = 27.8°, θmin = 1.2° |
| Absorption correction: multi-scan ( | |
| 8306 measured reflections |
| Refinement on | 2 restraints |
| Least-squares matrix: full | Hydrogen site location: mixed |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 4185 reflections | Δρmax = 0.26 e Å−3 |
| 243 parameters | Δρmin = −0.16 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| S1A | 1.04515 (14) | −0.04804 (7) | 0.29204 (4) | 0.0744 (3) | |
| S2A | 0.87636 (14) | 0.02612 (6) | 0.18771 (4) | 0.0673 (2) | |
| O1A | 0.7237 (4) | 0.23802 (19) | 0.51914 (11) | 0.0781 (6) | |
| H1A | 0.627 (5) | 0.292 (2) | 0.5388 (16) | 0.105 (11)* | |
| O2A | 0.4101 (4) | 0.26892 (19) | 0.43314 (12) | 0.0884 (7) | |
| O3A | 1.4882 (4) | −0.16886 (17) | −0.02741 (11) | 0.0745 (6) | |
| H3A | 1.596 (5) | −0.222 (2) | −0.0447 (18) | 0.127 (13)* | |
| O4A | 1.4099 (4) | −0.32979 (16) | 0.06596 (10) | 0.0775 (6) | |
| C1A | 0.6119 (6) | 0.2170 (2) | 0.45711 (15) | 0.0640 (7) | |
| C2A | 0.7747 (6) | 0.1205 (3) | 0.42096 (16) | 0.0794 (9) | |
| H2AA | 0.9044 | 0.1604 | 0.3846 | 0.095* | |
| H2AB | 0.8663 | 0.0643 | 0.4625 | 0.095* | |
| C3A | 0.6193 (6) | 0.0492 (3) | 0.37810 (16) | 0.0738 (8) | |
| H3AA | 0.5658 | 0.1007 | 0.3287 | 0.089* | |
| H3AB | 0.4630 | 0.0276 | 0.4095 | 0.089* | |
| C4A | 0.7675 (6) | −0.0675 (2) | 0.36052 (15) | 0.0735 (8) | |
| H4AA | 0.6464 | −0.1145 | 0.3398 | 0.088* | |
| H4AB | 0.8274 | −0.1162 | 0.4100 | 0.088* | |
| C5A | 0.7684 (5) | −0.1061 (2) | 0.15574 (15) | 0.0623 (7) | |
| H5AA | 0.6608 | −0.1495 | 0.1978 | 0.075* | |
| H5AB | 0.6594 | −0.0777 | 0.1106 | 0.075* | |
| C6A | 0.9844 (5) | −0.1966 (2) | 0.13303 (14) | 0.0586 (6) | |
| H6AA | 1.1029 | −0.2205 | 0.1762 | 0.070* | |
| H6AB | 0.9088 | −0.2698 | 0.1247 | 0.070* | |
| C7A | 1.1351 (5) | −0.1431 (2) | 0.05930 (13) | 0.0550 (6) | |
| H7AA | 1.0154 | −0.1211 | 0.0163 | 0.066* | |
| H7AB | 1.2036 | −0.0682 | 0.0675 | 0.066* | |
| C8A | 1.3562 (5) | −0.2257 (2) | 0.03466 (13) | 0.0549 (6) | |
| N1B | 0.4619 (4) | 0.38299 (19) | 0.60732 (12) | 0.0634 (6) | |
| N2B | −0.2001 (4) | 0.69792 (17) | 0.89024 (12) | 0.0619 (6) | |
| C1B | 0.2496 (6) | 0.4565 (3) | 0.58974 (15) | 0.0752 (8) | |
| H1B | 0.1860 | 0.4652 | 0.5393 | 0.090* | |
| C2B | 0.1163 (5) | 0.5213 (2) | 0.64262 (14) | 0.0657 (7) | |
| H2B | −0.0307 | 0.5732 | 0.6270 | 0.079* | |
| C3B | 0.2016 (4) | 0.50899 (19) | 0.71826 (12) | 0.0482 (6) | |
| C4B | 0.4247 (5) | 0.4314 (2) | 0.73679 (13) | 0.0568 (6) | |
| H4B | 0.4919 | 0.4201 | 0.7869 | 0.068* | |
| C5B | 0.5455 (5) | 0.3712 (2) | 0.68026 (14) | 0.0631 (7) | |
| H5B | 0.6942 | 0.3194 | 0.6939 | 0.076* | |
| C6B | −0.2730 (5) | 0.7174 (2) | 0.81551 (15) | 0.0655 (7) | |
| H6B | −0.4152 | 0.7733 | 0.8012 | 0.079* | |
| C7B | −0.1501 (5) | 0.6598 (2) | 0.75835 (14) | 0.0578 (6) | |
| H7B | −0.2093 | 0.6767 | 0.7071 | 0.069* | |
| C8B | 0.0639 (4) | 0.57597 (19) | 0.77791 (13) | 0.0477 (6) | |
| C9B | 0.1404 (5) | 0.5567 (2) | 0.85557 (13) | 0.0577 (6) | |
| H9B | 0.2827 | 0.5019 | 0.8715 | 0.069* | |
| C10B | 0.0063 (5) | 0.6186 (2) | 0.90922 (14) | 0.0633 (7) | |
| H10B | 0.0622 | 0.6045 | 0.9608 | 0.076* |
| S1A | 0.0605 (5) | 0.0877 (5) | 0.0845 (5) | 0.0148 (4) | −0.0181 (4) | −0.0456 (4) |
| S2A | 0.0779 (5) | 0.0572 (4) | 0.0685 (4) | 0.0008 (3) | 0.0026 (4) | −0.0206 (3) |
| O1A | 0.0807 (14) | 0.0935 (14) | 0.0625 (11) | 0.0290 (11) | −0.0102 (10) | −0.0350 (11) |
| O2A | 0.0810 (15) | 0.1039 (15) | 0.0861 (14) | 0.0257 (12) | −0.0253 (12) | −0.0411 (12) |
| O3A | 0.0912 (15) | 0.0658 (11) | 0.0640 (11) | 0.0144 (10) | 0.0107 (10) | −0.0185 (10) |
| O4A | 0.0936 (15) | 0.0618 (11) | 0.0692 (12) | 0.0252 (10) | −0.0073 (10) | −0.0048 (9) |
| C1A | 0.0731 (19) | 0.0640 (16) | 0.0546 (15) | 0.0076 (14) | 0.0012 (14) | −0.0173 (13) |
| C2A | 0.079 (2) | 0.0869 (19) | 0.0806 (19) | 0.0143 (16) | −0.0110 (16) | −0.0441 (17) |
| C3A | 0.075 (2) | 0.0852 (19) | 0.0631 (16) | 0.0072 (15) | −0.0015 (14) | −0.0248 (15) |
| C4A | 0.094 (2) | 0.0654 (16) | 0.0629 (16) | 0.0057 (15) | −0.0097 (15) | −0.0197 (14) |
| C5A | 0.0628 (17) | 0.0658 (15) | 0.0616 (15) | −0.0032 (13) | −0.0026 (13) | −0.0207 (13) |
| C6A | 0.0675 (18) | 0.0527 (13) | 0.0574 (14) | −0.0010 (12) | −0.0042 (13) | −0.0154 (12) |
| C7A | 0.0591 (16) | 0.0546 (13) | 0.0504 (13) | 0.0096 (12) | −0.0096 (11) | −0.0114 (11) |
| C8A | 0.0617 (16) | 0.0589 (15) | 0.0463 (13) | 0.0086 (12) | −0.0143 (12) | −0.0183 (12) |
| N1B | 0.0697 (15) | 0.0664 (13) | 0.0553 (12) | 0.0062 (11) | 0.0018 (11) | −0.0208 (11) |
| N2B | 0.0729 (15) | 0.0546 (12) | 0.0586 (12) | −0.0003 (11) | 0.0096 (11) | −0.0164 (10) |
| C1B | 0.076 (2) | 0.101 (2) | 0.0514 (15) | 0.0174 (17) | −0.0120 (14) | −0.0279 (15) |
| C2B | 0.0632 (17) | 0.0813 (18) | 0.0520 (14) | 0.0174 (14) | −0.0094 (12) | −0.0191 (13) |
| C3B | 0.0533 (15) | 0.0453 (12) | 0.0456 (12) | −0.0007 (11) | −0.0001 (11) | −0.0089 (10) |
| C4B | 0.0652 (17) | 0.0558 (14) | 0.0483 (13) | 0.0105 (12) | −0.0059 (12) | −0.0125 (11) |
| C5B | 0.0687 (18) | 0.0602 (15) | 0.0582 (15) | 0.0149 (13) | −0.0047 (13) | −0.0136 (13) |
| C6B | 0.0674 (18) | 0.0630 (15) | 0.0646 (16) | 0.0115 (13) | −0.0004 (14) | −0.0158 (13) |
| C7B | 0.0579 (16) | 0.0642 (15) | 0.0508 (13) | 0.0078 (12) | −0.0047 (12) | −0.0140 (12) |
| C8B | 0.0522 (14) | 0.0415 (11) | 0.0491 (12) | −0.0021 (10) | 0.0021 (11) | −0.0092 (10) |
| C9B | 0.0715 (18) | 0.0498 (13) | 0.0504 (13) | 0.0080 (12) | −0.0070 (12) | −0.0103 (11) |
| C10B | 0.086 (2) | 0.0576 (14) | 0.0460 (13) | 0.0022 (14) | −0.0018 (13) | −0.0129 (12) |
| C1A—C2A | 1.513 (3) | C6A—H6AB | 0.9700 |
| C2A—C3A | 1.487 (4) | C7A—H7AA | 0.9700 |
| C3A—C4A | 1.522 (3) | C7A—H7AB | 0.9700 |
| C4A—S1A | 1.811 (3) | N1B—C1B | 1.320 (3) |
| C1A—O1A | 1.309 (3) | N1B—C5B | 1.330 (3) |
| C1A—O2A | 1.198 (3) | N2B—C6B | 1.334 (3) |
| S1A—S2A | 2.0369 (14) | N2B—C10B | 1.334 (3) |
| C8A—C7A | 1.497 (3) | C1B—C2B | 1.388 (3) |
| C7A—C6A | 1.507 (3) | C1B—H1B | 0.9300 |
| C6A—C5A | 1.522 (3) | C2B—C3B | 1.377 (3) |
| S2A—C5A | 1.805 (3) | C2B—H2B | 0.9300 |
| O3A—C8A | 1.325 (3) | C3B—C4B | 1.389 (3) |
| O4A—C8A | 1.197 (3) | C3B—C8B | 1.498 (3) |
| O1A—H1A | 0.851 (10) | C4B—C5B | 1.379 (3) |
| O3A—H3A | 0.863 (10) | C4B—H4B | 0.9300 |
| C2A—H2AA | 0.9700 | C5B—H5B | 0.9300 |
| C2A—H2AB | 0.9700 | C6B—C7B | 1.375 (3) |
| C3A—H3AA | 0.9700 | C6B—H6B | 0.9300 |
| C3A—H3AB | 0.9700 | C7B—C8B | 1.393 (3) |
| C4A—H4AA | 0.9700 | C7B—H7B | 0.9300 |
| C4A—H4AB | 0.9700 | C8B—C9B | 1.388 (3) |
| C5A—H5AA | 0.9700 | C9B—C10B | 1.380 (3) |
| C5A—H5AB | 0.9700 | C9B—H9B | 0.9300 |
| C6A—H6AA | 0.9700 | C10B—H10B | 0.9300 |
| C4A—S1A—S2A | 102.70 (10) | C6A—C7A—H7AA | 108.5 |
| C5A—S2A—S1A | 102.95 (9) | C8A—C7A—H7AB | 108.5 |
| C1A—O1A—H1A | 109 (2) | C6A—C7A—H7AB | 108.5 |
| C8A—O3A—H3A | 108 (2) | H7AA—C7A—H7AB | 107.5 |
| O2A—C1A—O1A | 123.6 (2) | O4A—C8A—O3A | 123.4 (2) |
| O2A—C1A—C2A | 126.0 (3) | O4A—C8A—C7A | 125.4 (2) |
| O1A—C1A—C2A | 110.4 (2) | O3A—C8A—C7A | 111.2 (2) |
| C3A—C2A—C1A | 113.4 (2) | C1B—N1B—C5B | 116.8 (2) |
| C3A—C2A—H2AA | 108.9 | C6B—N2B—C10B | 117.1 (2) |
| C1A—C2A—H2AA | 108.9 | N1B—C1B—C2B | 123.4 (2) |
| C3A—C2A—H2AB | 108.9 | N1B—C1B—H1B | 118.3 |
| C1A—C2A—H2AB | 108.9 | C2B—C1B—H1B | 118.3 |
| H2AA—C2A—H2AB | 107.7 | C3B—C2B—C1B | 120.0 (2) |
| C2A—C3A—C4A | 113.2 (2) | C3B—C2B—H2B | 120.0 |
| C2A—C3A—H3AA | 108.9 | C1B—C2B—H2B | 120.0 |
| C4A—C3A—H3AA | 108.9 | C2B—C3B—C4B | 116.6 (2) |
| C2A—C3A—H3AB | 108.9 | C2B—C3B—C8B | 122.2 (2) |
| C4A—C3A—H3AB | 108.9 | C4B—C3B—C8B | 121.2 (2) |
| H3AA—C3A—H3AB | 107.8 | C5B—C4B—C3B | 119.4 (2) |
| C3A—C4A—S1A | 116.6 (2) | C5B—C4B—H4B | 120.3 |
| C3A—C4A—H4AA | 108.1 | C3B—C4B—H4B | 120.3 |
| S1A—C4A—H4AA | 108.1 | N1B—C5B—C4B | 123.8 (2) |
| C3A—C4A—H4AB | 108.1 | N1B—C5B—H5B | 118.1 |
| S1A—C4A—H4AB | 108.1 | C4B—C5B—H5B | 118.1 |
| H4AA—C4A—H4AB | 107.3 | N2B—C6B—C7B | 123.8 (2) |
| C6A—C5A—S2A | 115.37 (18) | N2B—C6B—H6B | 118.1 |
| C6A—C5A—H5AA | 108.4 | C7B—C6B—H6B | 118.1 |
| S2A—C5A—H5AA | 108.4 | C6B—C7B—C8B | 119.4 (2) |
| C6A—C5A—H5AB | 108.4 | C6B—C7B—H7B | 120.3 |
| S2A—C5A—H5AB | 108.4 | C8B—C7B—H7B | 120.3 |
| H5AA—C5A—H5AB | 107.5 | C9B—C8B—C7B | 116.6 (2) |
| C7A—C6A—C5A | 112.23 (19) | C9B—C8B—C3B | 121.9 (2) |
| C7A—C6A—H6AA | 109.2 | C7B—C8B—C3B | 121.5 (2) |
| C5A—C6A—H6AA | 109.2 | C10B—C9B—C8B | 120.3 (2) |
| C7A—C6A—H6AB | 109.2 | C10B—C9B—H9B | 119.9 |
| C5A—C6A—H6AB | 109.2 | C8B—C9B—H9B | 119.9 |
| H6AA—C6A—H6AB | 107.9 | N2B—C10B—C9B | 122.8 (2) |
| C8A—C7A—C6A | 115.2 (2) | N2B—C10B—H10B | 118.6 |
| C8A—C7A—H7AA | 108.5 | C9B—C10B—H10B | 118.6 |
| C2A—C3A—C4A—S1A | −66.2 (3) | C1B—N1B—C5B—C4B | −0.4 (4) |
| C3A—C4A—S1A—S2A | −68.2 (2) | C3B—C4B—C5B—N1B | 0.3 (4) |
| O2A—C1A—C2A—C3A | −28.2 (4) | C10B—N2B—C6B—C7B | 0.8 (4) |
| C1A—C2A—C3A—C4A | −165.0 (2) | N2B—C6B—C7B—C8B | −0.2 (4) |
| S2A—C5A—C6A—C7A | −67.6 (2) | C6B—C7B—C8B—C9B | −0.4 (4) |
| S1A—S2A—C5A—C6A | −67.67 (19) | C6B—C7B—C8B—C3B | 178.8 (2) |
| C6A—C7A—C8A—O4A | 4.3 (4) | C2B—C3B—C8B—C9B | 175.5 (3) |
| C5A—C6A—C7A—C8A | 178.3 (2) | C4B—C3B—C8B—C9B | −4.9 (4) |
| C6A—C7A—C8A—O3A | −175.9 (2) | C2B—C3B—C8B—C7B | −3.7 (4) |
| C5B—N1B—C1B—C2B | 0.9 (5) | C4B—C3B—C8B—C7B | 175.9 (2) |
| N1B—C1B—C2B—C3B | −1.2 (5) | C7B—C8B—C9B—C10B | 0.3 (4) |
| C1B—C2B—C3B—C4B | 1.0 (4) | C3B—C8B—C9B—C10B | −179.0 (2) |
| C1B—C2B—C3B—C8B | −179.5 (2) | C6B—N2B—C10B—C9B | −0.9 (4) |
| C2B—C3B—C4B—C5B | −0.5 (4) | C8B—C9B—C10B—N2B | 0.4 (4) |
| C8B—C3B—C4B—C5B | 179.9 (2) | O1A—C1A—C2A—C3A | 152.4 (3) |
| H··· | ||||
| O1 | 0.85 (1) | 1.83 (1) | 2.661 (3) | 163 (3) |
| O3 | 0.86 (1) | 1.80 (1) | 2.637 (3) | 162 (3) |
| C9 | 0.93 | 2.49 | 3.404 (3) | 167 |