Literature DB >> 25307106

Crystal structure of human Ankyrin G death domain.

Ying Liu1, Yan Zhang, Jia-Huai Wang.   

Abstract

Ankyrins (Ank) are a ubiquitously expressed family of multifunctional membrane adapter proteins. Ankyrin G (AnkG) is critical for assembling and maintenance of the axon initial segment. Here we present the 2.1 Å crystal structure of human AnkG death domain (hAnkG-DD). The core death domain is composed of six α-helices and three 3₁₀-helices. It forms a hydrophobic pocket on the surface of the molecule. The C-terminal tail of the hAnkG-DD curves back to have the aromatic ring of a phenylalanine residue, Phe100 insert into this pocket, which anchors the flexible tail onto the core domain. Related DDs were selected for structure comparison. The major variations are at the C-terminal region, including the α6 and the long C-terminal extension. The results of size exclusion chromatography and analytical ultracentrifugation suggest that hAnkG-DD exists as monomer in solution. Our work should help for the future investigation of the structure-function of AnkG.
© 2014 Wiley Periodicals, Inc.

Entities:  

Keywords:  310-helix; apoptosis; axon initial segment; hydrophobic pocket; monomer

Mesh:

Substances:

Year:  2014        PMID: 25307106      PMCID: PMC4258306          DOI: 10.1002/prot.24702

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  25 in total

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Authors:  T Xiao; P Towb; S A Wasserman; S R Sprang
Journal:  Cell       Date:  1999-11-24       Impact factor: 41.582

Review 2.  The axon initial segment and the maintenance of neuronal polarity.

Authors:  Matthew N Rasband
Journal:  Nat Rev Neurosci       Date:  2010-07-14       Impact factor: 34.870

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Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

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Authors:  Shelly A Buffington; Matthew N Rasband
Journal:  Eur J Neurosci       Date:  2011-11       Impact factor: 3.386

5.  Ankyrin-3 is a novel binding partner of the voltage-gated potassium channel Kv1.1 implicated in renal magnesium handling.

Authors:  Pedro San-Cristobal; Sergio Lainez; Henrik Dimke; Mark J J de Graaf; Joost G J Hoenderop; René J M Bindels
Journal:  Kidney Int       Date:  2013-07-31       Impact factor: 10.612

6.  A novel protein domain required for apoptosis. Mutational analysis of human Fas antigen.

Authors:  N Itoh; S Nagata
Journal:  J Biol Chem       Date:  1993-05-25       Impact factor: 5.157

7.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

8.  AnkyrinG is required to maintain axo-dendritic polarity in vivo.

Authors:  Jürgen-Markus Sobotzik; Jana Maria Sie; Chrisoula Politi; Domenico Del Turco; Vann Bennett; Thomas Deller; Christian Schultz
Journal:  Proc Natl Acad Sci U S A       Date:  2009-09-24       Impact factor: 11.205

9.  The death domain of kidney ankyrin interacts with Fas and promotes Fas-mediated cell death in renal epithelia.

Authors:  Marcela Del Rio; Abubakr Imam; Maryely DeLeon; Gary Gomez; Jaya Mishra; Qing Ma; Samir Parikh; Prasad Devarajan
Journal:  J Am Soc Nephrol       Date:  2004-01       Impact factor: 10.121

10.  The axon hillock and the initial segment.

Authors:  S L Palay; C Sotelo; A Peters; P M Orkand
Journal:  J Cell Biol       Date:  1968-07       Impact factor: 10.539

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