Literature DB >> 25304874

PLACE: an open-source python package for laboratory automation, control, and experimentation.

Jami L Johnson1, Henrik Tom Wörden2, Kasper van Wijk3.   

Abstract

In modern laboratories, software can drive the full experimental process from data acquisition to storage, processing, and analysis. The automation of laboratory data acquisition is an important consideration for every laboratory. When implementing a laboratory automation scheme, important parameters include its reliability, time to implement, adaptability, and compatibility with software used at other stages of experimentation. In this article, we present an open-source, flexible, and extensible Python package for Laboratory Automation, Control, and Experimentation (PLACE). The package uses modular organization and clear design principles; therefore, it can be easily customized or expanded to meet the needs of diverse laboratories. We discuss the organization of PLACE, data-handling considerations, and then present an example using PLACE for laser-ultrasound experiments. Finally, we demonstrate the seamless transition to post-processing and analysis with Python through the development of an analysis module for data produced by PLACE automation.
© 2014 Society for Laboratory Automation and Screening.

Keywords:  Python; laboratory automation; laser ultrasound; open source

Mesh:

Year:  2014        PMID: 25304874     DOI: 10.1177/2211068214553022

Source DB:  PubMed          Journal:  J Lab Autom        ISSN: 2211-0682


  2 in total

1.  All-optical extravascular laser-ultrasound and photoacoustic imaging of calcified atherosclerotic plaque in excised carotid artery.

Authors:  Jami L Johnson; Mervyn Merrilees; Jeffrey Shragge; Kasper van Wijk
Journal:  Photoacoustics       Date:  2018-02-07

2.  ChemOS: An orchestration software to democratize autonomous discovery.

Authors:  Loïc M Roch; Florian Häse; Christoph Kreisbeck; Teresa Tamayo-Mendoza; Lars P E Yunker; Jason E Hein; Alán Aspuru-Guzik
Journal:  PLoS One       Date:  2020-04-16       Impact factor: 3.240

  2 in total

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