Literature DB >> 25303870

Compositional features are potentially involved in the regulation of gene expression of tumor suppressor genes in human tissues.

Mohammadreza Hajjari1, Atefeh Khoshnevisan2, Mehrdad Behmanesh3.   

Abstract

Different mechanisms regulate the expression level of tissue specific genes in human. Here we report some compositional features such as codon usage bias, amino acid usage bias, codon frequency, and base composition which may be potentially related to mRNA amount of tissue specific tumor suppressor genes. Our findings support the possibility that structural elements in gene and protein may play an important role in the regulation of tumor suppressor genes, development, and tumorigenesis. The data presented here can open broad vistas in the understanding and treatment of a variety of human malignancies.
Copyright © 2014 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Codon usage; Expression level; In silico analysis; Tumor suppressor gene

Mesh:

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Year:  2014        PMID: 25303870     DOI: 10.1016/j.gene.2014.10.011

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  2 in total

1.  Tissue Specific Expression Levels of Apoptosis Involved Genes Have Correlations with Codon and Amino Acid Usage.

Authors:  Mohammadreza Hajjari; Iman Sadeghi; Abbas Salavaty; Habib Nasiri; Maryam Tahmasebi Birgani
Journal:  Genomics Inform       Date:  2016-12-31

2.  ExonSkipDB: functional annotation of exon skipping event in human.

Authors:  Pora Kim; Mengyuan Yang; Ke Yiya; Weiling Zhao; Xiaobo Zhou
Journal:  Nucleic Acids Res       Date:  2020-01-08       Impact factor: 16.971

  2 in total

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