Literature DB >> 25302479

Conformational and phase transitions in DNA--photosensitive surfactant solutions: Experiment and modeling.

N Kasyanenko1, L Lysyakova, R Ramazanov, A Nesterenko, I Yaroshevich, E Titov, G Alexeev, A Lezov, I Unksov.   

Abstract

DNA binding to trans- and cis-isomers of azobenzene containing cationic surfactant in 5 mM NaCl solution was investigated by the methods of dynamic light scattering (DLS), low-gradient viscometry (LGV), atomic force microscopy (AFM), circular dichroism (CD), gel electrophoresis (GE), flow birefringence (FB), UV-Vis spectrophotometry. Light-responsive conformational transitions of DNA in complex with photosensitive surfactant, changes in DNA optical anisotropy and persistent length, phase transition of DNA into nanoparticles induced by high surfactant concentration, as well as transformation of surfactant conformation under its binding to macromolecule were studied. Computer simulations of micelles formation for cis- and trans-isomers of azobenzene containing surfactant, as well as DNA-surfactant interaction, were carried out. Phase diagram for DNA-surfactant solutions was designed. The possibility to reverse the DNA packaging induced by surfactant binding with the dilution and light irradiation was shown.
© 2014 Wiley Periodicals, Inc.

Entities:  

Keywords:  DNA volume and persistent length; DNA-surfactant complexes; light-induced DNA de-compaction; phase diagram

Mesh:

Substances:

Year:  2015        PMID: 25302479     DOI: 10.1002/bip.22575

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  4 in total

1.  DNA Interaction with Head-to-Tail Associates of Cationic Surfactants Prevents Formation of Compact Particles.

Authors:  Nina Kasyanenko; Ivan Unksov; Vladimir Bakulev; Svetlana Santer
Journal:  Molecules       Date:  2018-06-28       Impact factor: 4.411

2.  A Dual pH- and Light-Responsive Spiropyran-Based Surfactant: Investigations on Its Switching Behavior and Remote Control over Emulsion Stability.

Authors:  Martin Reifarth; Marek Bekir; Alain M Bapolisi; Evgenii Titov; Fabian Nußhardt; Julius Nowaczyk; Dmitry Grigoriev; Anjali Sharma; Peter Saalfrank; Svetlana Santer; Matthias Hartlieb; Alexander Böker
Journal:  Angew Chem Int Ed Engl       Date:  2022-03-23       Impact factor: 16.823

3.  Spiropyran/Merocyanine Amphiphile in Various Solvents: A Joint Experimental-Theoretical Approach to Photophysical Properties and Self-Assembly.

Authors:  Vladyslav Savchenko; Nino Lomadze; Svetlana Santer; Olga Guskova
Journal:  Int J Mol Sci       Date:  2022-09-29       Impact factor: 6.208

4.  Self-Assembly of Amphiphilic Dendrimers: The Role of Generation and Alkyl Chain Length in siRNA Interaction.

Authors:  Valeria Márquez-Miranda; Ingrid Araya-Durán; María Belén Camarada; Jeffrey Comer; Jesús A Valencia-Gallegos; Fernando Danilo González-Nilo
Journal:  Sci Rep       Date:  2016-07-05       Impact factor: 4.379

  4 in total

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