Literature DB >> 25301107

Polymer translocation: the first two decades and the recent diversification.

Vladimir V Palyulin1, Tapio Ala-Nissila, Ralf Metzler.   

Abstract

Probably no other field of statistical physics at the borderline of soft matter and biological physics has caused such a flurry of papers as polymer translocation since the 1994 landmark paper by Bezrukov, Vodyanoy, and Parsegian and the study of Kasianowicz in 1996. Experiments, simulations, and theoretical approaches are still contributing novel insights to date, while no universal consensus on the statistical understanding of polymer translocation has been reached. We here collect the published results, in particular, the famous-infamous debate on the scaling exponents governing the translocation process. We put these results into perspective and discuss where the field is going. In particular, we argue that the phenomenon of polymer translocation is non-universal and highly sensitive to the exact specifications of the models and experiments used towards its analysis.

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Year:  2014        PMID: 25301107     DOI: 10.1039/c4sm01819b

Source DB:  PubMed          Journal:  Soft Matter        ISSN: 1744-683X            Impact factor:   3.679


  17 in total

1.  Pore translocation of knotted DNA rings.

Authors:  Antonio Suma; Cristian Micheletti
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-28       Impact factor: 11.205

2.  Ratchet rectification effect on the translocation of a flexible polyelectrolyte chain.

Authors:  Debasish Mondal; M Muthukumar
Journal:  J Chem Phys       Date:  2016-08-28       Impact factor: 3.488

3.  How capture affects polymer translocation in a solitary nanopore.

Authors:  Swarnadeep Seth; Aniket Bhattacharya
Journal:  J Chem Phys       Date:  2022-06-28       Impact factor: 4.304

4.  Discriminating protein tags on a dsDNA construct using a Dual Nanopore Device.

Authors:  Swarnadeep Seth; Arthur Rand; Walter Reisner; William B Dunbar; Robert Sladek; Aniket Bhattacharya
Journal:  Sci Rep       Date:  2022-07-04       Impact factor: 4.996

5.  DNA barcodes using a double nanopore system.

Authors:  Swarnadeep Seth; Aniket Bhattacharya
Journal:  Sci Rep       Date:  2021-05-07       Impact factor: 4.379

Review 6.  Multi-resolution simulation of DNA transport through large synthetic nanostructures.

Authors:  Adnan Choudhary; Christopher Maffeo; Aleksei Aksimentiev
Journal:  Phys Chem Chem Phys       Date:  2022-02-02       Impact factor: 3.676

7.  Polymer translocation through nano-pores in vibrating thin membranes.

Authors:  Timothée Menais; Stefano Mossa; Arnaud Buhot
Journal:  Sci Rep       Date:  2016-12-09       Impact factor: 4.379

8.  Driven translocation of a semi-flexible polymer through a nanopore.

Authors:  Jalal Sarabadani; Timo Ikonen; Harri Mökkönen; Tapio Ala-Nissila; Spencer Carson; Meni Wanunu
Journal:  Sci Rep       Date:  2017-08-07       Impact factor: 4.379

9.  A general theory of polymer ejection tested in a quasi two-dimensional space.

Authors:  Pai-Yi Hsiao; Wei-Yei Chen
Journal:  Sci Rep       Date:  2021-07-19       Impact factor: 4.379

10.  Asymmetric dynamics of DNA entering and exiting a strongly confining nanopore.

Authors:  Nicholas A W Bell; Kaikai Chen; Sandip Ghosal; Maria Ricci; Ulrich F Keyser
Journal:  Nat Commun       Date:  2017-08-30       Impact factor: 14.919

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