Literature DB >> 25300831

Setaria viridis.

Joyce Van Eck1, Kerry Swartwood.   

Abstract

Interest in plant model systems for genetic, biological, and functional genomics studies stems from advantages they provide in terms of fast generation time, small stature, and simple growth requirements. A model species would be especially advantageous for the studies of C4 photosynthetic grasses, which currently present practical challenges. These include long seed-to-seed generation times, and because of their large size at maturity they require large growing areas. One potential model of interest for C4 photosynthetic grasses is Setaria viridis. It has all the desirable aforementioned attributes for a model; however, for it to be adopted as a model for functional genomics studies, gene transfer methodology is also needed. In this chapter, we describe methods for Agrobacterium tumefaciens-mediated transformation of seed-derived callus. Vectors used for gene constructs contained the hygromycin phosphotransferase gene as a selectable marker. The transition of transgenic lines to soil was straightforward; plants started to flower in 1-3 weeks, with seeds ready to harvest approximately 5 weeks later.

Entities:  

Mesh:

Year:  2015        PMID: 25300831     DOI: 10.1007/978-1-4939-1695-5_5

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  12 in total

Review 1.  Accumulation of the components of cyclic electron flow around photosystem I in C4 plants, with respect to the requirements for ATP.

Authors:  Noriko Ishikawa; Atsushi Takabayashi; Fumihiko Sato; Tsuyoshi Endo
Journal:  Photosynth Res       Date:  2016-03-26       Impact factor: 3.573

2.  Grasses suppress shoot-borne roots to conserve water during drought.

Authors:  Jose Sebastian; Muh-Ching Yee; Willian Goudinho Viana; Rubén Rellán-Álvarez; Max Feldman; Henry D Priest; Charlotte Trontin; Tak Lee; Hui Jiang; Ivan Baxter; Todd C Mockler; Frank Hochholdinger; Thomas P Brutnell; José R Dinneny
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-15       Impact factor: 11.205

3.  Anatomy and ultrastructure of embryonic leaves of the C4 species Setaria viridis.

Authors:  Nicia E G Junqueira; Bianca Ortiz-Silva; Marcos Vinícius Leal-Costa; Márcio Alves-Ferreira; Hugh G Dickinson; Jane A Langdale; Fernanda Reinert
Journal:  Ann Bot       Date:  2018-05-11       Impact factor: 4.357

4.  Genetics and physiology of cell wall polysaccharides in the model C4 grass, Setaria viridis spp.

Authors:  Riksfardini A Ermawar; Helen M Collins; Caitlin S Byrt; Marilyn Henderson; Lisa A O'Donovan; Neil J Shirley; Julian G Schwerdt; Jelle Lahnstein; Geoffrey B Fincher; Rachel A Burton
Journal:  BMC Plant Biol       Date:  2015-10-02       Impact factor: 4.215

5.  A developing Setaria viridis internode: an experimental system for the study of biomass generation in a C4 model species.

Authors:  Antony P Martin; William M Palmer; Christopher Brown; Christin Abel; John E Lunn; Robert T Furbank; Christopher P L Grof
Journal:  Biotechnol Biofuels       Date:  2016-02-24       Impact factor: 6.040

Review 6.  Gene Overexpression Resources in Cereals for Functional Genomics and Discovery of Useful Genes.

Authors:  Kiyomi Abe; Hiroaki Ichikawa
Journal:  Front Plant Sci       Date:  2016-09-21       Impact factor: 5.753

7.  Setaria Comes of Age: Meeting Report on the Second International Setaria Genetics Conference.

Authors:  Chuanmei Zhu; Jiani Yang; Christine Shyu
Journal:  Front Plant Sci       Date:  2017-09-28       Impact factor: 5.753

8.  The Status of Setaria viridis Transformation: Agrobacterium-Mediated to Floral Dip.

Authors:  Joyce Van Eck
Journal:  Front Plant Sci       Date:  2018-05-25       Impact factor: 5.753

Review 9.  Setaria viridis as a Model System to Advance Millet Genetics and Genomics.

Authors:  Pu Huang; Christine Shyu; Carla P Coelho; Yingying Cao; Thomas P Brutnell
Journal:  Front Plant Sci       Date:  2016-11-28       Impact factor: 5.753

10.  Arabidopsis Type III Gγ Protein AGG3 Is a Positive Regulator of Yield and Stress Responses in the Model Monocot Setaria viridis.

Authors:  Jagdeep Kaur; Swarup Roy Choudhury; Anitha Vijayakumar; Laryssa Hovis; Zach Rhodes; Rob Polzin; Dylan Blumenthal; Sona Pandey
Journal:  Front Plant Sci       Date:  2018-02-09       Impact factor: 5.753

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