| Literature DB >> 25299961 |
Seunghee Bae1, Kyung Mi Lim2, Hwa Jun Cha3, In-Sook An4, Jeong Pyo Lee5, Kwang Sik Lee6, Ghang Tai Lee7, Kun Kook Lee8, Ho Jung Jung9, Kyu Joong Ahn10, Sungkwan An11.
Abstract
BACKGROUND: Accumulating evidence indicates that reactive oxygen species (ROS) are an important etiological factor for the induction of dermal papilla cell senescence and hair loss, which is also known alopecia. Arctiin is an active lignin isolated from Arctium lappa and has anti-inflammation, anti-microbial, and anti-carcinogenic effects. In the present study, we found that arctiin exerts anti-oxidative effects on human hair dermal papilla cells (HHDPCs).Entities:
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Year: 2014 PMID: 25299961 PMCID: PMC4196076 DOI: 10.1186/0717-6287-47-50
Source DB: PubMed Journal: Biol Res ISSN: 0716-9760 Impact factor: 5.612
Figure 1H O -mediated loss of HDPPC viability was rescued by arctiin treatment. (A) WST-1 cytotoxicity assays of HHDPCs treated with various doses of arctiin. Each bar represents the mean ± SD from three independent experiments. (B) Arctiin dose-dependently inhibited H2O2-induced cytotoxicity as measured with WST-1 assays. The graph represents the mean ± S.D. of relative cell viability from triplicate experiments. *p < 0.05 compared with H2O2-treated HHDPCs.
Figure 2H O -induced G2 arrest and cell death were rescued by arctiin. (A) HHDPCs were treated with DMSO or arctiin prior to H2O2 exposure, and cell cycle status was assessed flow cytometry. (B and C) The graphs represent the mean values of cell populations from three independent experiments (sub-G1 and G1/G2, respectively). *p < 0.05 compared with control or H2O2-treated HHDPCs.
Figure 3Analysis of intracellular ROS levels with DCF-DA assays. (A) HHDPCs were pre-treated with DMSO or arctiin (20 μM) followed by H2O2 (750 μM) prior to flow cytometry. (B) The graph indicates the mean value of M1-phase (DCF-DA-stained) cells from three independent experiments. *p < 0.05 compared with H2O2-treated HHDPCs.
Figure 4Effect of arctiin on H O -induced senescence as measured by SA-β-gal assays. HHDPCs were pre-treated with DMSO or arctiin (20 μM) followed by H2O2. The graph indicates the mean value of senescent (SA-β-gal stained) cells from three independent experiments. *p < 0.05 compared with H2O2-treated HHDPCs.
Significantly altered miRNAs (>2-fold change) following arctiin treatment of H O -exposed HHDPCs
| miRNA | Change relative to controls | Direction of regulation | Chromosome | miRNA | Change relative to controls | Direction of regulation | Chromosome |
|---|---|---|---|---|---|---|---|
| hsa-miR-1181 | 2.13 | Up | 19 | hsa-miR-874 | 2.97 | Up | 5 |
| hsa-miR-125a-5p | 5.04 | Up | 19 | hsa-miR-890 | 2.83 | Up | X |
| hsa-miR-21-3p | 2.82 | Up | 17 | hsa-miR-939 | 2.59 | Up | 8 |
| hsa-miR-29b-1-5p | 3.12 | Up | 7 | hsa-miR-1290 | −7.56 | Down | 1 |
| hsa-miR-3663-3p | 2.19 | Up | 10 | hsa-miR-1915-3p | −2.63 | Down | 10 |
| hsa-miR-3127-5p | 2.01 | Up | 2 | hsa-miR-2861 | −3.31 | Down | 9 |
| hsa-miR-3663-3p | 2.03 | Up | 10 | hsa-miR-3665 | −2.37 | Down | 13 |
| hsa-miR-371a-5p | 3.14 | Up | 19 | hsa-miR-4257 | −3.62 | Down | 1 |
| hsa-miR-4327 | 2.95 | Up | 21 | hsa-miR-452-5p | −2.54 | Down | X |
| hsa-miR-584-5p | 2.31 | Up | 5 | hsa-miR-513a-5p | −3.15 | Down | X |
| hsa-miR-602 | 5.74 | Up | 9 | hsa-miR-572 | −5.80 | Down | 4 |
| hsa-miR-629-3p | 2.71 | Up | 15 | hsa-miR-629-3p | −3.03 | Down | 15 |
| hsa-miR-642b-3p | 2.10 | Up | 19 | hsa-miR-765 | −7.18 | Down | 1 |
| hsa-miR-651 | 3.91 | Up | X | hsa-miR-875-5p | −3.91 | Down | 8 |
| hsa-miR-762 | 2.84 | Up | 16 | hsa-miR-940 | −2.31 | Down | 16 |
Predicted targets of miRNAs upregulated by arctiin in H O -treated HHDPCs
| miRNA | Target genes and functions | |||
|---|---|---|---|---|
| Aging | Skin development | Apoptosis | Cell proliferation | |
| hsa-miR-1181 | - | - | - | - |
| hsa-miR-125a-5p | EPO, EDN1, BCL2, BAK1, CASP2, PTH1R | COL4A3 | ITCH, COL4A3, HIPK2, RAF1, EPO, EDN1, BCL2, MAP2K7, MAP3K1, ARHGEF3, TRAF6, CASP2, BAK1, IRF1, APPL1, ETS1, BMF, MCL1, BCL2L2, BAG4, HK2, FOXQ1, CREB1, E2F2, TP73, USP7, MAPK7, FGFR2, BRCA1, MAP3K11, REST, DICER1, ARHGEF2, MAP3K10, SORT1, BNIP2, DDX5, CSNK2A1, MKNK2 | BRCA1, MAP3K11, ETS1, LIF, SOX11, CD34, NCOR2, BAP1, IRF1, APPL1, REST, DICER1, EPO, EDN1, BCL2, BAK1, ARHGEF2, FGFR2, ITCH, ABCB1, COL4A3, KIF15, HIPK2, RAF1, EIF5A2, CARM1 |
| hsa-miR-21-3p | CDK6 | - | MAP2K4, MAP3K1, BCL2L11, ROBO2, RNF41, BAG4, CUL3, FOXO3, SMAD3, AMIGO2, KDM28, DAB2IP, TRIM32, SOX4, CCAR1, SLC11A2, DSG1 | CDK6, KDM28, CUL3, SOX4, SMAD3, NR6A1, FTO, CD274, DAB2IP, TRIM32, FOXO3, PBRM1 |
| hsa-miR-29b-1-5p | NR3C1, SIRT1 | - | NR3C1, SIRT1, REST, PTK2, SOS2, NUAK2, PSMD7 | NR3C1, SIRT1, REST, PTK2, FGF18, INSR, PBRM1 |
| hsa-miR-3663-3p | FAS, CASP2, CDKN1A, PTH1R | ADAMTS2, BCL11B, COL3A1, COL1A1 | CDKN1A, BCL11B, PPP2R1B, TGFB2, DDX5, COMP, PIGT, FAS, USP28, TIAL1, CASP2, PSMA2, MEF2D | FAS, USP28, TIAL1, TGFB2, CDKN1A, BCL11B, VSIG |
| hsa-miR-371a-5p | - | LEF1, ATP7A, COL8A1 | LEF1, SOX2, CITED2, STK4, RB1CC1, BARD1, RPS6KA1, GSK3B, PSMF1, MAP3K1, NR4A2, DYRK2, ITSN1, | LEF1, SOX2, CITED2, STK4, COL8A1, RNF10, MAPRE1, BTG3, CCR2, FRS2, PRMT5 |
| hsa-miR-4327 | RPS6KB1 | STS | RPS6KB1, ADAMTS20, FGF10, IGF1R, FGD4, RPS6KA3 | RPS6KB1, IGF1R, FGF10, STS, PROX1, NF2, IFNK |
| hsa-miR-584-5p | SOD2, MORC3 | PTCH2 | SOD2, SIX1, LRP6, FGF10, TRIM24, HDAC1, CUL2, SRPK2, NBN, ETS1, DSG3, MTDH, PDE3A, SLAMF7 | SOD2, SIX1, LRP6, FGF10, TRIM24, HDAC1, CUL2, SRPK2, NBN, ETS1, PRRX1, FER, USP8, WWTR1 |
| hsa-miR-602 | EDN1, VDR, SOD2, HTT, SLC34A2, CHEK1 | APC | EDN1, VDR, SOD2, HTT, APC, NOG, ERBB4, PIM1, PPARG, ALDH1A2, CLI2, SEMA3A, H1F0, DYRK2, BCL2L15, JMY, PSMD2, TP53BP2, MYO18A, SHF | NOG, ERBB4, PIM1, PPARG, CLI2, CDK13, LIFR, STAT3, EDN1, VDR, SOD2, CDC27, EMX2, CDK9, RTKN2, ID4, APC, ALDH1A2, PPP1R8, ACSL6, ZEB1 |
| hsa-miR-642b-3p | HMGA2, PTEN, CDKN1A, SERPINE1, MET | BCL11B | SERPINE1, BCL11B, PDCD10, HMGA2, PTEN, RB1, CYLD, EIF2AK2, BCLAF1, MAPK8, CDKN1A, WT1, CDK5R1, MTCH1, EPHA7, NR4A3, CSNK2A1 | SERPINE1, BCL11B, PDCD10, HMGA2, PTEN, WT1, AMBN, CDKN1A, CDK5R1, RB1, PAX6, NR2F2, PHOX2B |
| hsa-miR-651 | - | - | BTC, MED1, ATG3, CHMP3 | CTC, MED1 |
| hsa-miR-762 | RELA, PML | - | RELA, PML, MAPK1, SOX7, ITCH, HIPK2, BCL6, PPARD, CX3CL1, AGAP2, MYO18A, PAK4, ABR, CLIP3, ADD1, PAX7, ITGB2, PDE1B, MAP3K9 | EFNB1, LIFR, MMP14, BAP1, RELA, PML, MAPK1, SOX7, PAK4, ITCH, HIPK2, BCL6, CX3CL1, AGAP2, PPARD, NRARP, PTCH1, WARS, FTO |
| hsa-miR-874 | DDC | - | ESR1, ALDH1A2, HIPK2, PAK7, GZMB, IKBKB, SORT1 | ESR1, ALDH1A2, HIPK2, PAK7, RXRB, COMT |
| hsa-miR-890 | CDK6, SERP1, F3, PDCD4, ATP5G3, TIMP3 | TCF7L2, ITGA2, ERRFI1 | SORT1, UBE2B, MAX, PEG3, F3, PDCD4, TCF7L2, SNAI2, AIPL1, AKAP13, ALB, TRIO, REST, PROK2, KRIT, NF1, APBB1, PSME2 | F3, CDK6, TCF7L2, SNAI2, REST, PROK2, KRIT, NF1, EGF, SOX17, MARCKSL1, WARS, EPS8, |
| hsa-miR-939 | TIMP1, ATM, CDKN1A, NEK6, SCL34A2, PRELP, SLC1A2 | NGFR, COL1A1 | TNF, BCL6, BTC, NRG1, IHH, THRA, IP6K2, PAX7, CASP10, CDKN1A, CAMK1D, TRAIP, WNK3, CLIP3, MT3, INHBB, TIMP1, ATM, NEK6, NGFR, NACC1, USP7, CSNK2A2, BCL2L2 | BCL6, BTC, NRG1, IHH, GRN, TRAIP, CDKN1A, TNF, E2F8, RXRB, RARA, DRD2, CSF1, TIMP1, ATM, NGFR, MT3, NOS2, AGGF1, ELN |
Predicted targets of miRNAs downregulated by arctiin in H O -treated HHDPCs
| miRNA | Target genes and functions | |||
|---|---|---|---|---|
| Aging | Skin development | Apoptosis | Cell proliferation | |
| hsa-miR-1290 | HMGA2, NUAK1, TERF2, SLC1A2, FADS1, DDC | APC, COL8A1 | HMGA2, APC, RRN3, ITGAV, CSE1L, NOTCH1, GAS, BMI1, FOXC1, ROBO1, USP28 | HMGA2, BMI1, NUAK1, APC, MLL2, RRN3, ITGAV, CSE1L, NOTCH1, GAS, FOXC1, ROBO1, USP28, CDC27, HES1, COL8A1, NPR3, CDKN2B, FIGF, NRAS |
| hsa-miR-1915-3p | BCL2, SRF, SREBF2, HSD17B10 | SRF, DDR1, EDA | BCL2, MAPK311, ARHGEF2, CDK5R1, WNT3A, MMP9, THRA, MEF2D, SET, CD44 | DDR1, CDK2, DEAF1, TIRAP, BCL2, MAP3K11, ARHGEF2, CDK5R1, WNT3A, TNFSF11, WDR6, AZGP1, TAL1, DPT |
| hsa-miR-2861 | P2PY2, FADS1 | NGFR, EDA | NGFR, PTPRC, ITGA1, MAEL, FGD2, AKT2, PAX8 | NGFR, PTPRC, SLAMF1, HOXB4, AKT2, HOXB4, |
| hsa-miR-3665 | AQP2 | - | AQP2, FGFR1, BOK, TRIO, NOTCH1, PGAP2, PDPK1, BARD1 | BOK, FEZF1, ABCB1, FOXO4, EIF5A2, WNT9A, NDFIP1, FGFR1, NOTCH1, CDK13 |
| hsa-miR-4257 | TWIST1, CTSC, HMGA1 | COL2A1 | TWIST1, CTSC, IGF1R, IL10, GSK3B, RASSF5, COL2A1, AKT1S1, CD44, ASAH2 | TWIST1, HMGA1, IL10, INSR, MAPRE2, PA2G4, PRDM1, IGF1R, MMP14, EMX2, TRIM27, MCM7 |
| hsa-miR-452-5p | TIMP3 | - | SPRY2, PAX3, SOX7, LRP6, SNAI2, CSNK2A2, FGD4, PKN2, ITGA6, PDCD6IP | SPRY2, PAX3, SOX7, LRP6, SNAI2, RPA1, EPS8, NFIB, MAPRE1, ODZ1, CDCA7L, CD47, E2F3, PURA, RUNX1 |
| hsa-miR-513a-5p | SERP1, NEK6, CDK6, DLD, PRKCD, MAP2K1, MORC3, LRRK2, SLC1A2 | WNT7A, SFN, TFAP2B, APC | SPRY2, MLL, GATA3, BCL6, PRKCD, NEK6, MED1, PLK2, WNT7A, SFN, APC, HOXA5, AKAP13, USP47, MAP2K4, ISL1, MITF, STAT1, XIAP, TFAP2B, HDAC2, TRIM2, CREB1, MAP3K7, WNK3, SOS1, FGD4 | TFAP2B, WNT7A, APC, HGF, EBXW7, TSC1, KRAS, RXRB, XIAP, SPRY2, GATA3, BCL6, HOXA5, ISL1, MITF, STAT1, NFIB, E2F7, MAGI2, PDKK, HDAC2, MED1, EHF, LIFR, PURA, GATA2, ATF3, VIP, SOX11, RUNX1, RNF139, PCM1, TSHR, EPS8 |
| hsa-miR-572 | - | - | - | - |
| hsa-miR-629-3p | SOD2, VDR, EDN1, CHEK1, SLC34A2 | - | THOC1, MYO18A, TP53BP2, SOD2, VDR, EDN1, APC, PPARG, PIM1, ERBB4, PSMD2, PERP, BCL2L15 | DLG3, RTKN2, CDK9, STAT3, SOD2, VDR, EDN1, PPARG, PIM1, ERBB4, APC, STAT6, PDGFC, ZEB1, ID4, LIFR, NOLC1, EPHB1, ACSL6, EREG, CDK13, CDC27 |
| hsa-miR-765 | VDR, RELA, SOCS3, TIMP3, LOXL2 | PDGFA, ERRFI1 | DLG5, RARG, MED1, EGLN2, VDR, RELA, SOCS3, ERBB4, RNF41, ATG7, ARHGEF11, PDE5A, CXCL12, GLI3, DIDO1, CASP9, ACIN1 | CXCL12, GLI3, DLG5, RARG, VDR, RELA, ERBB4, PDE5A, MED1, PDGFA, CD34, GPC3, PDX1, COL8A1, PES1, TSC2, SF1, FTO, GABBR1, |
| hsa-miR-875-5p | TGFB3, SMC5 | TCF7L2 | TGFB3, TCF7L2, EYA1, MDM4, MEF2C, EGFR, WNK3 | MDM4, MEF2C, EGFR, FRS2, TGFB3, EYA1, TOB2, TBX18, CEP120, TCF7L2, TIRAP, RNF139, SALL1 |
| hsa-miR-940 | - | - | - | - |
Main functions of upregulated miRNAs predicted by bioinformatic analysis
| miRNA | Putative target genes | KEGG pathway | Genes involved in the term | % of involved genes/total genes |
|
|---|---|---|---|---|---|
| ( | |||||
| miR-1181 | 2 | - | - | - | - |
| miR-125a-5p | 162 | Pathways in cancer | 8 | 4.9 | 3.60E-02 |
| Cell cycle | 4 | 2.5 | 1.20E-01 | ||
| miR-21-3p | 210 | Cell adhesion molecules | 7 | 3.3 | 4.70E-03 |
| Ubiquitin mediated proteolysis | 6 | 2.9 | 2.30E-02 | ||
| Oocyte meiosis | 5 | 2.4 | 4.20E-02 | ||
| miR-29b-1-5p | 265 | Insulin signaling pathway | 5 | 1.9 | 8.50E-02 |
| Cell cycle | 4 | 1.5 | 2.00E-01 | ||
| Wnt signaling pathway | 4 | 1.5 | 2.90E-01 | ||
| Jak-STAT signaling pathway | 4 | 1.5 | 3.00E-01 | ||
| miR-3663-3p | 305 | MAPK signaling pathway | 12 | 3.9 | 5.90E-03 |
| Pathways in cancer | 11 | 3.6 | 5.50E-02 | ||
| Focal adhesion | 7 | 2.3 | 1.30E-01 | ||
| Cytokine-cytokine receptor interaction | 7 | 2.3 | 3.00E-01 | ||
| miR-371a-5p | 351 | Spliceosome | 8 | 2.3 | 4.20E-03 |
| Wnt signaling pathway | 7 | 2 | 3.60E-02 | ||
| miR-4327 | 112 | MAPK signaling pathway | 4 | 3.6 | 1.20E-01 |
| Pathways in cancer | 4 | 3.6 | 1.80E-01 | ||
| Melanoma | 3 | 2.7 | 4.00E-02 | ||
| Calcium signaling pathway | 3 | 2.7 | 1.90E-01 | ||
| miR-584-5p | 288 | MAPK signaling pathway | 8 | 2.8 | 9.70E-02 |
| Pathways in cancer | 8 | 2.8 | 2.10E-01 | ||
| miR-602 | 302 | MAPK signaling pathway | 7 | 2.3 | 2.20E-01 |
| Insulin signaling pathway | 6 | 2 | 5.30E-02 | ||
| Alzheimer’s disease | 6 | 2 | 1.00E-01 | ||
| Calcium signaling pathway | 6 | 2 | 1.30E-01 | ||
| miR-629-3p | 445 | Pathways in cancer | 10 | 2.3 | 2.10E-01 |
| miR-642b-3p | 262 | Glioma | 4 | 1.5 | 3.20E-02 |
| Melanoma | 4 | 1.5 | 4.30E-02 | ||
| Cell adhesion molecules | 5 | 1.8 | 5.70E-02 | ||
| miR-651 | 60 | Calcium signaling pathway | 3 | 4.3 | 5.40E-01 |
| Ubiquitin mediated proteolysis | 3 | 4.3 | 6.00E-02 | ||
| Regulation of autophagy | 2 | 2.9 | 9.90E-02 | ||
| miR-762 | 534 | Axon guidance | 16 | 3 | 6.60E-07 |
| MAPK signaling pathway | 16 | 3 | 2.90E-03 | ||
| Wnt signaling pathway | 13 | 2.4 | 4.00E-04 | ||
| miR-874 | 176 | B and T cell receptor signaling pathway | 4 | 2.3 | 2.20E-02 |
| MAPK signaling pathway | 4 | 2.3 | 3.70E-01 | ||
| mir-890 | 325 | Wnt signaling pathway | 7 | 2.1 | 6.50E-02 |
| ErbB signaling pathway | 5 | 1.5 | 8.10E-02 | ||
| miR-939 | 365 | Calcium signaling pathway | 10 | 2.4 | 1.30E-02 |
| ErbB signaling pathway | 5 | 1.2 | 1.20E-01 | ||
| p53 signaling pathway | 4 | 0.9 | 1.80E-01 | ||
| Wnt signaling pathway | 6 | 1.4 | 2.20E-01 |
Main functions of downregulated miRNAs predicted by bioinformatic analysis
| miRNA | Putative target genes | KEGG pathway | Genes involved in the term | % of involved genes/total genes |
|
|---|---|---|---|---|---|
| ( | |||||
| miR-1290 | 593 | Pathways in cancer | 17 | 2.9 | 4.00E-02 |
| Focal adhesion | 14 | 2.4 | 7.90E-03 | ||
| Insulin signaling pathway | 13 | 2.2 | 7.60E-04 | ||
| MAPK signaling pathway | 12 | 2 | 1.90E-01 | ||
| ErbB signaling pathway | 11 | 1.9 | 2.80E-04 | ||
| miR-1915-3p | 351 | Wnt signaling pathway | 8 | 2.3 | 5.60E-03 |
| Pathways in cancer | 7 | 2 | 3.30E-01 | ||
| miR-2861 | 170 | Fc gamma R-mediated phagocytosis | 4 | 2.2 | 3.60E-02 |
| MAPK signaling pathway | 6 | 3.4 | 5.10E-02 | ||
| Arachidonic acid metabolism | 3 | 1.7 | 6.80E-02 | ||
| miR-3665 | 195 | Neurotrophin signaling pathway | 4 | 2.1 | 1.10E-01 |
| Insulin signaling pathway | 4 | 2.1 | 1.30E-01 | ||
| MAPK signaling pathway | 4 | 2.1 | 4.70E-01 | ||
| miR-4257 | 197 | - | - | - | - |
| miR-452-5p | 327 | Oocyte meiosis | 8 | 2.3 | 1.30E-03 |
| Wnt signaling pathway | 7 | 2 | 2.60E-02 | ||
| ECM-receptor interaction | 5 | 1.4 | 3.80E-02 | ||
| miR-513a-5p | 980 | MAPK signaling pathway | 25 | 2.6 | 1.00E-02 |
| Pathways in cancer | 24 | 2.4 | 1.30E-01 | ||
| Regulation of actin cytoskeleton | 20 | 2 | 2.50E-02 | ||
| miR-572 | 6 | - | - | - | - |
| miR-629-3p | 445 | Pathways in cancer | 10 | 2.3 | 2.10E-01 |
| miR-765 | 548 | Cytokine-cytokine receptor interaction | 11 | 2 | 2.00E-01 |
| miR-875-5p | 181 | MAPK signaling pathway | 6 | 3.3 | 7.30E-02 |
| Spliceosome | 5 | 2.8 | 2.10E-02 | ||
| miR-940 | - | - | - | - | - |