Literature DB >> 25288528

Structural insights into RNA recognition properties of glyceraldehyde-3-phosphate dehydrogenase 3 from Saccharomyces cerevisiae.

Hui Shen1, Hong Wang, Qiao Liu, Huihui Liu, Maikun Teng, Xu Li.   

Abstract

Glyceraldehyde-3-phosphate dehydrogenase (GAPDH, EC: 1.2.1.12) is an essential enzyme in the glycolytic pathway. However, recent evidence demonstrates that GAPDH displays a range of new functions unrelated to its glycolytic function. GAPDH has long been known as a 3' AU-rich element-binding protein; however, its RNA recognition mechanism is still not well understood. Here, we present the first crystal structure of GAPDH3 from Saccharomyces cerevisiae and identify its RNA-binding specificity and propose an RNA recognition model based on structural and biochemical studies. This study sheds light on the RNA-binding mechanism of GAPDH3 and contributes to a better understanding of the molecular mechanisms of its RNA-related functions.
© 2014 International Union of Biochemistry and Molecular Biology.

Entities:  

Keywords:  GAPDH3; RNA binding; RNA recognition model; crystal structure; sequence specificity

Mesh:

Substances:

Year:  2014        PMID: 25288528     DOI: 10.1002/iub.1313

Source DB:  PubMed          Journal:  IUBMB Life        ISSN: 1521-6543            Impact factor:   3.885


  4 in total

1.  Verification of a novel glyceraldehyde-3-phosphate dehydrogenase capable of histamine degradation and its preliminary application in wine production.

Authors:  Dongqi Jiang; Huamin Li; Shuyang Sun
Journal:  Food Sci Biotechnol       Date:  2020-10-31       Impact factor: 2.391

2.  Fitness effects of altering gene expression noise in Saccharomyces cerevisiae.

Authors:  Fabien Duveau; Andrea Hodgins-Davis; Brian Ph Metzger; Bing Yang; Stephen Tryban; Elizabeth A Walker; Tricia Lybrook; Patricia J Wittkopp
Journal:  Elife       Date:  2018-08-20       Impact factor: 8.140

Review 3.  The sweet side of RNA regulation: glyceraldehyde-3-phosphate dehydrogenase as a noncanonical RNA-binding protein.

Authors:  Michael R White; Elsa D Garcin
Journal:  Wiley Interdiscip Rev RNA       Date:  2015-11-12       Impact factor: 9.957

4.  Conserved metabolite regulation of stress granule assembly via AdoMet.

Authors:  Kyle Begovich; Anthony Q Vu; Gene Yeo; James E Wilhelm
Journal:  J Cell Biol       Date:  2020-08-03       Impact factor: 10.539

  4 in total

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