Literature DB >> 25286935

Structure of Streptococcus agalactiae glyceraldehyde-3-phosphate dehydrogenase holoenzyme reveals a novel surface.

Chapelle A Ayres1, Norbert Schormann2, Olga Senkovich3, Alexandra Fry1, Surajit Banerjee4, Glen C Ulett5, Debasish Chattopadhyay2.   

Abstract

Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) is a conserved cytosolic enzyme, which plays a key role in glycolysis. GAPDH catalyzes the oxidative phosphorylation of D-glyceraldehyde 3-phosphate using NAD or NADP as a cofactor. In addition, GAPDH localized on the surface of some bacteria is thought to be involved in macromolecular interactions and bacterial pathogenesis. GAPDH on the surface of group B streptococcus (GBS) enhances bacterial virulence and is a potential vaccine candidate. Here, the crystal structure of GBS GAPDH from Streptococcus agalactiae in complex with NAD is reported at 2.46 Å resolution. Although the overall structure of GBS GAPDH is very similar to those of other GAPDHs, the crystal structure reveals a significant difference in the area spanning residues 294-307, which appears to be more acidic. The amino-acid sequence of this region of GBS GAPDH is also distinct compared with other GAPDHs. This region therefore may be of interest as an immunogen for vaccine development.

Entities:  

Keywords:  Streptococcus agalactiae; glyceraldehyde 3-phosphate dehydrogenase

Mesh:

Substances:

Year:  2014        PMID: 25286935      PMCID: PMC4188075          DOI: 10.1107/S2053230X14019517

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  26 in total

1.  Characterization of group B streptococcal glyceraldehyde-3-phosphate dehydrogenase: surface localization, enzymatic activity, and protein-protein interactions.

Authors:  Kyle N Seifert; William P McArthur; Arnold S Bleiweis; L Jeannine Brady
Journal:  Can J Microbiol       Date:  2003-05       Impact factor: 2.419

2.  Multifunctional glyceraldehyde-3-phosphate dehydrogenase of Streptococcus pyogenes is essential for evasion from neutrophils.

Authors:  Yutaka Terao; Masaya Yamaguchi; Shigeyuki Hamada; Shigetada Kawabata
Journal:  J Biol Chem       Date:  2006-03-24       Impact factor: 5.157

3.  Characterization of binding of Streptococcus oralis glyceraldehyde-3-phosphate dehydrogenase to Porphyromonas gingivalis major fimbriae.

Authors:  Kazuhiko Maeda; Hideki Nagata; Masae Kuboniwa; Kosuke Kataoka; Nobuko Nishida; Muneo Tanaka; Satoshi Shizukuishi
Journal:  Infect Immun       Date:  2004-09       Impact factor: 3.441

4.  Integration, scaling, space-group assignment and post-refinement.

Authors:  Wolfgang Kabsch
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-01-22

5.  Interaction with human plasminogen system turns on proteolytic activity in Streptococcus agalactiae and enhances its virulence in a mouse model.

Authors:  Vanessa Magalhães; Isabel Veiga-Malta; Maria Rosário Almeida; Marina Baptista; Adília Ribeiro; Patrick Trieu-Cuot; Paula Ferreira
Journal:  Microbes Infect       Date:  2007-06-09       Impact factor: 2.700

Review 6.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

7.  Group B streptococcus GAPDH is released upon cell lysis, associates with bacterial surface, and induces apoptosis in murine macrophages.

Authors:  Liliana Oliveira; Pedro Madureira; Elva Bonifácio Andrade; Abdelouhab Bouaboud; Eric Morello; Paula Ferreira; Claire Poyart; Patrick Trieu-Cuot; Shaynoor Dramsi
Journal:  PLoS One       Date:  2012-01-23       Impact factor: 3.240

8.  Overview of the CCP4 suite and current developments.

Authors:  Martyn D Winn; Charles C Ballard; Kevin D Cowtan; Eleanor J Dodson; Paul Emsley; Phil R Evans; Ronan M Keegan; Eugene B Krissinel; Andrew G W Leslie; Airlie McCoy; Stuart J McNicholas; Garib N Murshudov; Navraj S Pannu; Elizabeth A Potterton; Harold R Powell; Randy J Read; Alexei Vagin; Keith S Wilson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

9.  MolProbity: all-atom structure validation for macromolecular crystallography.

Authors:  Vincent B Chen; W Bryan Arendall; Jeffrey J Headd; Daniel A Keedy; Robert M Immormino; Gary J Kapral; Laura W Murray; Jane S Richardson; David C Richardson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

10.  A major surface protein on group A streptococci is a glyceraldehyde-3-phosphate-dehydrogenase with multiple binding activity.

Authors:  V Pancholi; V A Fischetti
Journal:  J Exp Med       Date:  1992-08-01       Impact factor: 14.307

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  5 in total

1.  Deciphering Key Residues Involved in the Virulence-promoting Interactions between Streptococcus pneumoniae and Human Plasminogen.

Authors:  Christophe Moreau; Rémi Terrasse; Nicole M Thielens; Thierry Vernet; Christine Gaboriaud; Anne Marie Di Guilmi
Journal:  J Biol Chem       Date:  2016-12-23       Impact factor: 5.157

2.  Crystal Structures of Group B Streptococcus Glyceraldehyde-3-Phosphate Dehydrogenase: Apo-Form, Binary and Ternary Complexes.

Authors:  Norbert Schormann; Chapelle A Ayres; Alexandra Fry; Todd J Green; Surajit Banerjee; Glen C Ulett; Debasish Chattopadhyay
Journal:  PLoS One       Date:  2016-11-22       Impact factor: 3.240

3.  Novel Structures of Type 1 Glyceraldehyde-3-phosphate Dehydrogenase from Escherichia coli Provide New Insights into the Mechanism of Generation of 1,3-Bisphosphoglyceric Acid.

Authors:  Li Zhang; Meiruo Liu; Luyao Bao; Kristina I Boström; Yucheng Yao; Jixi Li; Shaohua Gu; Chaoneng Ji
Journal:  Biomolecules       Date:  2021-10-22

4.  Streptococcus agalactiae glyceraldehyde-3-phosphate dehydrogenase (GAPDH) elicits multiple cytokines from human cells and has a minor effect on bacterial persistence in the murine female reproductive tract.

Authors:  Matthew J Sullivan; Kelvin G K Goh; Ruby Thapa; Debasish Chattopadhyay; Deepak S Ipe; Benjamin L Duell; Lahiru Katupitiya; Dean Gosling; Dhruba Acharya; Glen C Ulett
Journal:  Virulence       Date:  2021-12       Impact factor: 5.882

5.  Porphyromonas gingivalis HmuY and Streptococcus gordonii GAPDH-Novel Heme Acquisition Strategy in the Oral Microbiome.

Authors:  Paulina Ślęzak; Michał Śmiga; John W Smalley; Klaudia Siemińska; Teresa Olczak
Journal:  Int J Mol Sci       Date:  2020-06-10       Impact factor: 5.923

  5 in total

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