We have recently identified 1,8-naphthyridin-2(1H)-one-3-carboxamide as a new scaffold very suitable for the development of new CB2 receptor potent and selective ligands. In this paper we describe a number of additional derivatives in which the same central scaffold has been variously functionalized in position 1 or 6. All new compounds showed high selectivity and affinity in the nanomolar range for the CB2 receptor. Furthermore, we found that their functional activity is controlled by the presence of the substituents at position C-6 of the naphthyridine scaffold. In fact, the introduction of substituents in this position determined a functionality switch from agonist to antagonists/inverse agonists. Finally, docking studies showed that the difference between the pharmacology of these ligands may be in the ability/inability to block the Toggle Switch W6.48(258) (χ1 g+ → trans) transition.
We have recently identified 1,8-naphthyridin-2(1H)-one-3-carboxamide as a new scaffold very suitable for the development of new CB2 receptor potent and selective ligands. In this paper we describe a number of additional derivatives in which the same central scaffold has been variously functionalized in position 1 or 6. All new compounds showed high selectivity and affinity in the nanomolar range for the CB2 receptor. Furthermore, we found that their functional activity is controlled by the presence of the substituents at position C-6 of the naphthyridine scaffold. In fact, the introduction of substituents in this position determined a functionality switch from agonist to antagonists/inverse agonists. Finally, docking studies showed that the difference between the pharmacology of these ligands may be in the ability/inability to block the Toggle Switch W6.48(258) (χ1 g+ → trans) transition.
Cannabinoidsare a
unique family of terpenophenolic active constituents
of Cannabis sativa; Δ9-tetrahydrocannabinol
(THC) is the most relevant member, owing to its psychoactive effects
and a wide variety of pharmacological effects.[1,2] The
isolation and characterization of THC[3] allowed
for the identification of two distinct cannabinoid receptors (CBRs),
named CB1 receptor (CB1R) and CB2 receptor (CB2R), that have been
cloned and characterized from mammalian tissues.[4,5] CB1R
is abundantly expressed in the central nervous system (CNS), with
the highest densities in the hippocampus, cerebellum, and striatum.[6] Locations outside the brain have also been indicated,
including adipose tissue, liver, muscle, the gastrointestinal tract,
pancreas, urinary bladder, lung, heart, adrenal gland, testis, uterus,
and prostate.[7−10] In contrast, CB2R has been reported to be essentially limited to
the cells associated with the immune system, such as spleen, thymus,
and tonsils,[5] but it also has been found
in low concentrations in the brain.[11]Since the discovery of the CBRs and their endogenous ligands, numerous
studies implicate the endocannabinoid system in several physiological
and pathological processes, including cancer, appetite, fertility,
memory, neuropathic and inflammatory pain, obesity, and neurodegenerative
disease.[12] At the present time, CB2R has
gained attention as a potential target for immunoregulation. Recent
advances suggest a role for CB2R within the nervous system, particularly
in inflammatory conditions such as neurodegenerative disease (Parkinson’s
disease, Alzheimer’s disease, Huntington’s disease,
multiple sclerosis, etc.), since CB2R is up-regulated in the brain
under these conditions and disease states. This finding is supported
by observing the pattern of expression of CB2R during microglia differentiation
using an in vitro model of multistep activation.[13−15] Additional data suggest that CB2R-selective agonists show promise
for suppressing inflammatory and neuropathic pain states. Behavioral,
electrophysiological, and neurochemical studies all support a role
for CB2R activation in modulating inflammatory nociception. Moreover,
recent reviews have focused on the evidence for the functional neuronal
presence and the emerging role of CB2R in neuropsychiatric disorders.[16,17] Finally, CB2R is overexpressed in several tumor cells, and various in vitro studies and animal models have shown that activation
of the CB2R induces apoptosis, inhibits tumor growth, and inhibits
neo-angiogenesis.[1,18]The effectiveness of selective
CB2R agonpan>ists as neuroprotective
and anticancer agents prompted us to report our efforts in this field.
Our aim was to identify new selective CB2R agonists as potential drugs
devoid of the psychotropic side effects associated with CB1R.Recently we described the synthesis, binding affinities, and pharmacological
characterization of a novel series of 1,8-naphthyridin-2(1H)-one-3-carboxamides of general structure A (Figure 1), acting as potent and selective
CB2R ligands.[19] Furthermore, the concentration-dependent
inhibitory action on human basophils activation and the concentration-dependent
decrease of cell viability in Jurkat cells shown by one of these derivatives
strongly suggest that these compounds possess agonist properties on
CB2R.[19]
Figure 1
General structure of compounds A.
General structure of compounds A.In an effort to develop improved
naphthyridine-based CB2R ligands
and also to develop structure–activity relationships (SARs)
for both CB1R and CB2R, the present paper describes the synthesis
and the pharmacological properties of a number of additional 1,8-naphthyridin-2(1H)-one-3-carboxamide derivatives, 1–26 (summarized in Tables 1 and 2, below), in which the central naphthyridine scaffold
has been variously functionalized with different substituents in position
1 or 6. The 4-methylcyclohexyl carboxamide group in position 3 has
been selected on the basis of binding results obtained for derivatives A. The new compounds were tested in competitive binding assays
toward both human recombinant CB1R and CB2R expressed in HEK-293 cells
and were found to be selective for CB2R. Furthermore, the functional
activity of the most representative compounds was determined by a
β-arrestin 2 recruitment assay using U2OS cells co-expressing
CB2R and β-arr2/GFP as well as with a forskolin-stimulated cAMP
assay, demonstrating that the functionality of tested compounds is
controlled by the presence of the substituents at position C-6 of
the naphthyridine scaffold.
Table 1
Radioligand Binding
Data of 1,8-Naphthyridin-2(1H)-one-3-carboxamide
Derivatives 1–16a
Ki (nM)
compd
R1
CB1b
CB2c
Ki(CB1)/Ki(CB2)
1
CH2(CH2)2CH3
2314 ± 108
3.90 ± 0.17
593
2
CH2(CH2)3CH3
908 ± 19.3
2.82 ± 0.08
322
3
CH2CH2OH
>10 000
2096 ± 98.8
>5
4
CH2(CH2)2OH
>10 000
129 ± 5.55
>77
5
CH2(CH2)3OH
>10 000
53.3 ± 1.22
>187
6
CH2(CH2)4OH
>10 000
3.60 ± 0.13
>2778
7
CH2(CH2)5OH
>10 000
18.0 ± 0.26
>554
8
CH2CH2COOEt
>10 000
176 ± 7.3
>57
9
CH2(CH2)2COOEt
>10 000
62.6 ± 0.79
>160
10
CH2(CH2)3COOMe
>10 000
27.1 ± 0.77
>369
11
CH2CH2COOH
>10 000
1394 ± 62.3
>7
12
CH2(CH2)2COOH
>10 000
2466 ± 95.5
>4
13
CH2(CH2)3COOH
>10 000
1341 ± 53.4
>7
14
CH2(CH2)3F
1011 ± 46.5
1.36 ± 0.053
743
15
CH2(CH2)4F
22.59 ± 1.02
0.56 ± 0.013
40.3
16
CH2(CH2)5F
35.67 ± 1.09
1.46 ± 0.014
24.4
A1
morpholinoethyl
1000
1.90
526
A2
p-fluorobenzyl
200
0.90
222
SR144528
437
0.60
728
JWH133
677
3.00
226
Data represent mean values for at
least three separate experiments performed in duplicate and are expressed
as Ki (nM) for CB1R and CB2R binding assays.
Affinity of compounds for CB1R
was
evaluated using membranes from HEK-293 cells transfected with CB1R
and [3H]CP-55,940.
Affinity of compounds for CB2R was
evaluated using membranes from HEK-293 cells transfected with CB2R
and [3H]CP-55,940.
Table 2
Radioligand Binding Data of 6-Substituted
1,8-Naphthyridin-2(1H)-one-3-carboxamide Derivatives 17–26a
Ki (nM)
compd
R1
R2
CB1b
CB2c
Ki(CB1)/Ki(CB2)
17
p-fluorobenzyl
Br
96.1 ± 1.99
0.18 ± 0.002
534
17-trans
p-fluorobenzyl
Br
166 ± 7.7
1.12 ± 0.01
148
17-cis
p-fluorobenzyl
Br
121 ± 5.32
0.12 ± 0.002
1010
18
morpholinoethyl
Br
750 ± 26.5
1.26 ± 0.04
595
19
p-fluorobenzyl
p-methoxyphenyl
3262 ± 101
3.83 ± 0.05
851
20
p-fluorobenzyl
2-thienyl
3280 ± 116
1.85 ± 0.06
1773
20-trans
p-fluorobenzyl
2-thienyl
430 ± 20.2
65.6 ± 2.41
6.5
20-cis
p-fluorobenzyl
2-thienyl
472 ± 20.6
0.96 ± 0.035
491
21
p-fluorobenzyl
p-fluorophenyl
>10 000
2.17 ± 0.09
>4608
22
p-fluorobenzyl
2-furyl
3444 ± 170.5
0.67 ± 0.009
5140
22-trans
p-fluorobenzyl
2-furyl
>10 000
94.2 ± 2.47
>106
22-cis
p-fluorobenzyl
2-furyl
4056 ± 200
0.27 ± 0.004
15 022
23
morpholinoethyl
p-methoxyphenyl
>10 000
1.47 ± 0.05
>6802
24
morpholinoethyl
2-thienyl
32.7 ± 1.48
0.17 ± 0.002
192
25
morpholinoethyl
p-fluorophenyl
66.7 ± 2.33
0.68 ± 0.009
98
26
morpholinoethyl
2-furyl
52.9 ± 1.90
0.35 ± 0.01
151
Data represent mean values for at
least three separate experiments performed in duplicate and are expressed
as Ki (nM) for CB1R and CB2R binding assays.
Affinity of compounds for CB1R
was
evaluated using membranes from HEK-293 cells transfected with CB1R
and [3H]CP-55,940.
Affinity of compounds for CB2R was
evaluated using membranes from HEK-293 cells transfected with CB2R
and [3H]CP-55,940.
Finally, docking studies were performed
in order to analyze both
the complex of the CB2R in its inactive state (R) with antagonists/inverse
agonists and the complex of the CB2R in its activated state (R*) with
agonists. These studies demonstrated that the difference between the
pharmacology of these ligands may be in the ability/inability to block
the Toggle Switch W6.48(258) (χ1 g+ → trans) transition.
Chemistry
The synthesis of compounds 1–26 is depicted in Schemes 1–3. As reported in Scheme 1 the N1-alkylation of
1,8-naphthyridine-3-carboxamide 27(19) in anhydrous DMF with the suitable halogenated reagent
in the presence of cesium carbonate at 50 °C for 12 h afforded
the desired compounds 1–10. The carboxylic
acid derivatives 11–13 were obtained
from the corresponding esters 8–10 by alkaline hydrolysis followed by acidification.
Scheme 1
Synthesis of 1,8-Naphthyridin-2(1H)-one-3-carboxamide
Derivatives 1–13
Reagents
and conditions: (i)
Cs2CO3, R1Cl or R1Br,
DMF, 50 °C, 12 h, 23%–85%; (ii) NaOH aq. 10%. 110 °C,
5h, 92%–95%.
Scheme 3
Synthesis of 1,8-Naphthyridin-2(1H)-one-3-carboxamide
Derivatives 17–26
Reagents and conditions: (i)
Br2, AcOH, 24 h, r.t., 73%; (ii) diethyl malonate, piperidine,
EtOH, reflux, 12 h, 90%; (iii) 4-methylcyclohexylamine, 150 °C,
24 h, 65%; (iv) Cs2CO3, p-fluorobenzyl
chloride or 4-(2-chloroethyl)morpholine, DMF, 50 °C, 12 h, 71%,
92%; (v) Ph3P, Pd(OAc)2, dioxane, Na2CO3, suitable boronic acid, 150 °C, microwave (200
W, 100 psi, 15 min, under stirring), 41–94%.
Synthesis of 1,8-Naphthyridin-2(1H)-one-3-carboxamide
Derivatives 1–13
Reagents
and conditions: (i)
Cs2CO3, R1Cl or R1Br,
DMF, 50 °C, 12 h, 23%–85%; (ii) NaOHaq. 10%. 110 °C,
5h, 92%–95%.The synthesis of fluorine
derivatives 14–16 is outlined in
Scheme 2. Treatment
of alcohol derivatives 5–7 with methanesulfonyl
chloride in anhydrous
dichloromethane and triethylamine at room temperature for 6 h generated
mesylates 28–30. Exposure of 28–30 to tetrabutylammonium fluoride in
THF at reflux for 4 h provided derivatives 14–16.
Scheme 2
Synthesis of 1,8-Naphthyridin-2(1H)-one-3-carboxamide
Derivatives 14–16
Reagents
and conditions: (i)
CH2Cl2, Et3N, MsCl, r.t., 6 h, 37%–86%;
(ii) TBAF, CH2Cl2, reflux, 4 h, 47%–49%.
Synthesis of 1,8-Naphthyridin-2(1H)-one-3-carboxamide
Derivatives 14–16
Reagents
and conditions: (i)
CH2Cl2, Et3N, MsCl, r.t., 6 h, 37%–86%;
(ii) TBAF, CH2Cl2, reflux, 4 h, 47%–49%.The synthetic route to obtain 6-substituted 1,8-naphthyridin-2(1H)-one-3-carboxamide derivatives 17–26 is outlined in Scheme 3. 2-Aminonicotinaldehyde was treated with bromine
in glacial acetic acid at room temperature for 24 h to obtain the
corresponding 6-bromo derivative 31, which was refluxed
with diethyl malonate and in the presence of piperidine in EtOH for
24 h to afford ethyl 6-bromo-1,8-naphthyridin-2(1H)-one-3-carboxylate 32. The reaction of ethyl ester 32 with a cis/trans diastereoisomeric mixture
of 4-methylcyclohexylamine in a sealed tube for 24 h at 150 °C
provided the desired carboxamide 33. N-Alkylation of 33 in anhydrous DMF with p-fluorobenzyl chloride or 4-(2-chloroethyl)morpholine in the presence
of cesium carbonate afforded the desired 1,8-naphthyridin-2-one derivatives 17 and 18, respectively. To obtain compounds 19–26, 6-bromo derivatives 17 or 18 were subjected to a cross-coupling reaction with
suitable boronic acids in dioxane under Suzuki conditions by generating in situ Pd(PPh3)4 as the catalyst
and aqueous Na2CO3 (2 M) as the base. These
reactions were carried out in a microwave reactor (CEM). Each crude
mixture was purified by flash chromatography. For compounds 17, 20, and 22, the separation of cis and trans isomers was also obtained.
Synthesis of 1,8-Naphthyridin-2(1H)-one-3-carboxamide
Derivatives 17–26
Reagents and conditions: (i)
Br2, AcOH, 24 h, r.t., 73%; (ii) diethyl malonate, piperidine,
EtOH, reflux, 12 h, 90%; (iii) 4-methylcyclohexylamine, 150 °C,
24 h, 65%; (iv) Cs2CO3, p-fluorobenzyl
chloride or 4-(2-chloroethyl)morpholine, DMF, 50 °C, 12 h, 71%,
92%; (v) Ph3P, Pd(OAc)2, dioxane, Na2CO3, suitable boronic acid, 150 °C, microwave (200
W, 100 psi, 15 min, under stirring), 41–94%.
Results and Discussion
CB1R and CB2R Affinity
The binding
affinities (Ki values) of target compounds 1–26 were evaluated by competitive radioligand
displacement assays against the humanCB1R and CB2R using [3H]CP-55,940 as the radioligand for both receptors.[19] The results are summarized in Tables 1 and 2, together with the Ki values of previously reported morpholinoethyl
and p-fluorobenzyl derivatives A1 and A2, respectively,[19] and reference
compounds SR144528[20] and JWH133.[21]Data represent mean values for at
least three separate experiments performed in duplicate and are expressed
as Ki (nM) for CB1R and CB2R binding assays.Affinity of compounds for CB1R
was
evaluated using membranes from HEK-293 cells transfected with CB1R
and [3H]CP-55,940.Affinity of compounds for CB2R was
evaluated using membranes from HEK-293 cells transfected with CB2R
and [3H]CP-55,940.Data represent mean values for at
least three separate experiments performed in duplicate and are expressed
as Ki (nM) for CB1R and CB2R binding assays.Affinity of compounds for CB1R
was
evaluated using membranes from HEK-293 cells transfected with CB1R
and [3H]CP-55,940.Affinity of compounds for CB2R was
evaluated using membranes from HEK-293 cells transfected with CB2R
and [3H]CP-55,940.First efforts to improve the CB2R affinity and selectivity were
focused on the introduction of a large variety of alkyl substituents
in position N-1 of the 1,8-naphthyridine nucleus. Compounds bearing n-butyl (1) and n-pentyl chains
(2) display excellent affinities for CB2R and low affinities
at CB1R, so these compounds behave similarly to previously studied
compounds A1 and A2.Interestingly,
compounds 3–7,
characterized by a hydroxyalkyl chain, show no affinity toward CB1R,
while their CB2R affinity increases with the elongation of the alkyl
chain length. In fact, the replacement of the hydroxyethyl group of 3 with a three-carbon (hydroxypropyl in compound 4), a four-carbon linker (hydroxybutyl in compound 5),
or a five-carbon linker (hydroxypentyl in compound 6)
progressively increased CB2R affinity (Ki values varying from 2096 nM to 3.60 nM). On the contrary, compound 7 possessing a further elongated hydroxyhexyl chain, displays
a slight loss in CB2R affinity (Ki = 18.0
nM).The replacement of the hydroxy group by a fluorine atom
allows
to increase affinity for CB2R, but significantly decreases the selectivity
toward this receptor (see compounds 15, 16), with the exception of compound 14, which has the
highest selectivity obtained for fluoroalkyl compounds (Ki(CB1)/Ki(CB2) = 743).Finally, the esters 8–10 display
a good CB2R affinity and no affinity toward CB1R (Ki > 10 000 nM), thus showing an important degree
of CB2R selectivity. The corresponding carboxylic acids 11–13 show no affinity toward CB1R (Ki > 10 000 nM) but also very low CB2R affinity.Next, with the aim to investigate the impact on the CB2R affinity
and selectivity within this series of 1,8-naphthyridin-2(1H)-one-3-carboxamides, various lipophilic groups were introduced
at the position C-6 (Table 2). In details,
compounds 17–26 are characterized
by the presence of the common 4-methylcyclohexyl carboxamide moiety
at position C-3 together with a p-fluorobenzyl or
a morpholinoethyl group at position N-1 of the naphthyridine scaffold,
since these groups had been shown to be important for CB2R affinity
in our previous studies.[19]All of
these 6-substituted analogues (17–26) maintain high CB2R affinities (Ki <
4 nM) relative to the corresponpan>ding compounds lacking
the substituent in positionpan> C-6 (A1 and A2, Table 1), with the exception of compounds 20-trans and 22-trans.With regard to the N-p-fluorobenzyl
derivatives, the compounds substituted in position 6 with a bromine
atom (17) exhibits a Ki value
at CB2R (0.18 nM) slightly lower than that of its reference analogue A2 (0.90 nM), while the selectivity for CB2R of this new compound
is considerably greater (A2, Ki(CB2)/Ki(CB1) = 222; 17, Ki(CB2)/Ki(CB1) =
534). The introduction of aromatic groups, such as p-methoxyphenyl (19), thienyl (20), p-fluorophenyl (21), or furyl (22), in position 6 of the naphthyridine nucleus generally results in
a significantly reduced affinity for the CB1R, when compared to that
of unsubstituted compound A2 or 6-bromine-substituted 17. Moreover, for some of these compounds (17, 20, and 22) the cis and trans isomers were separated in order to assess the effect
of stereoselectivity on the CB2R affinity. Pure isomers 17-cis, 20-cis, and 22-cis showed 9-fold, 68-fold, and 349-fold
increases in their affinity for the CB2R when compared with their
corresponding diastereoisomers 17-trans, 20-trans, and 22-trans. These data confirm our previously hypothesis that
the cis conformation is the preferred one for the
interaction of 4-methylcyclohexyl carboxamide derivatives at CB2R.[19]More surprisingly, substitution in position
C-6 of morpholinoethyl
derivatives (18, 23–26) did not significantly alter CB2R binding affinity respect to the
corresponding N-p-fluorobenzyl-substituted
derivatives, but determined a general enhancement of the affinity
on CB1R, with the exception of compound 23, which has
a Ki for CB1R higher than 10 000
nM.
CB2R Functional Activity
The potency and efficacy of
the new ligands 5, 14, 17, 18, and 23 and of previously studied derivatives A1 and A2 were characterized with a β-arrestin
2 assay using U2OS cells co-expressing CB2R and β-arr2/GFP as
previously described.[22] We chose these
representative compounds in order to assess the impact of the substitution
in positions 1 and 6 of the naphthyridine nucleus on the functional
activity. Furthermore, we have compared the pharmacology observed
using the β-arrestin 2 recruitment assay for compounds A1, A2, 14, and 18 with
the effects on forskolin-stimulated cAMP levels (Perkin-Elmer LANCE)
in the same cell line (Table 3).
Table 3
Affinities and Potencies of CB2 Ligands Obtained from Binding, Second Messenger, and Receptor
β-Arrestin Interaction Assaysa
Data represent mean values for at
least three separate experiments performed in duplicate.
Using
the β-arrestin 2 assay, four agonists at CB2R were determined, A1, A2, 5, and 14,
with CB2R EC50 values ranging from 17.6 to 29.6 nM (Figure 2, Table 3), while 17, 18, and 23 showed a reduction of basal
β-arrestin recruitment, therefore suggesting that these compounds
act as inverse agonists as well as antagonists (Figure 3, Table 3). The functionality of the
cannabinoid agonist WIN-55,212-2 and the antagonist SR144528 were
determined as reference compounds.
Figure 2
Concentration–response curves depicting
βarr2-GFP
recruitment following treatment with CB2R agonists. EC50 values are reported in Table 3. Activity
values were normalized to the agonist’s response (30 nM WIN-55,212–2
was considered as 100%). Data are the mean ± SE of three experiments
carried out in duplicate.
Figure 3
WIN-55,212–2 mediated βarr2-GFP recruitments is blocked
by CB2R antagonists. IC50 values are reported in Table 3. Activity values were normalized to the agonist’s
response (30 nM WIN-55,212–2 was considered as 100%). Data
are the mean ± SE of three experiments carried out in duplicate.
Concentration–response curves depicting
βarr2-GFP
recruitment following treatment with CB2R agonists. EC50 values are reported in Table 3. Activity
values were normalized to the agonist’s response (30 nM WIN-55,212–2
was considered as 100%). Data are the mean ± SE of three experiments
carried out in duplicate.WIN-55,212–2 mediated βarr2-GFP recruitments is blocked
by CB2R antagonists. IC50 values are reported in Table 3. Activity values were normalized to the agonist’s
response (30 nM WIN-55,212–2 was considered as 100%). Data
are the mean ± SE of three experiments carried out in duplicate.The ability of selected compounds A1, A2, 14, and 18 to
activate CB2R was assessed
in a functional cAMP assay using U2OS cells stably expressing humanCB2R. Unfortunately, compounds 5, 17, and 23 proved to be insoluble under the test conditions. Similar
to the agonist WIN-55,212-2 (EC50 = 17.3 nM), A1, A2, and 14 potently inhibited forskolin-mediated
cAMPproduction by humanCB2R, with EC50 = 28.0, 29.6,
and 20.6 nM, respectively (Figure 4, Table 3). The inhibition curve of antagonist/inverse agonists 18 on humanCB2R stimulated with WIN-55,212-2 (30 nM) is reported
in Figure 5, and IC50 = 59.6 nM.
Figure 4
CB2R Agonists
inhibit cAMP formation. Higher TR-FRET signals correlates
with lower cAMP levels. EC50 Values are reported in Table 3. Data are the mean ± SE of three experiments
carried out in triplicate.
Figure 5
Treatment with the CB2R antagonist/inverse agonist 18 inhibits the response to WIN-55,212–2 in the cAMP assay.
IC50 value is reported in Table 3. Data are the mean ± SE of three experiments carried out in
triplicate.
CB2R Agonpan>ists
inhibit cAMP formation. Higher TR-FRET signals correlates
with lower cAMP levels. EC50 Values are reported in Table 3. Data are the mean ± SE of three experiments
carried out in triplicate.Treatment with the CB2R antagonpan>ist/inverse agonpan>ist 18 inhibits the responpan>se to WIN-55,212–2 in the cAMP assay.
IC50 value is reported in Table 3. Data are the mean ± SE of three experiments carried out in
triplicate.Table 3 shows
an overall good correlation between the EC50 and IC50 values obtained using all three methodologies. With the
cell-based activity data, we demonstrated an analogue functional activity
for compounds A1, A2, 14, and 18, which indicates that both pathways, β-arrestin and
GPCR, are pharmacologically modulated by these ligands. Replacement
of p-fluorobenzyl (A2) and morpholinoethyl
(A1) groups with alkyl groups, such as 4-hydroxybutyl
(5) and 4-fluorobutyl (14), in position
N-1 was well tolerated, maintaining agonist activity and potency in
the β-arrestin and cAMP assays (compare A1 and A2 with 5 and 14). Interestingly
the tested compounds acted as agonists or antagonists/inverse agonists
in functional activity assays, depending on the presence of the substituents
at position C-6 of the naphthyridine scaffold. In fact, the introduction
of substituents (bromine or p-methoxyphenyl) in this
position determined a functionality switch from agonist to antagonists/inverse
agonists (see compounds 17, 18, and 23).Data represent mean values for at
least three sepn class="Chemical">arate experiments performed in duplicate.
Docking Study. The Key Molecular Features
That Discriminate
1,8-Naphthyridin-2(1H)-one-3-carboxamide Derivative
Agonists from Antagonists/Inverse Agonists
As we reported
previously,[19,23] the cis structural
isomer of the 4-methylcyclohexyl substituent has higher affinity for
n class="Gene">CB2R than the trans structural isomer by 7–13-fold.
Therefore, in the docking studies reported below, the lowest energy cis positionpan>al isomer was used. The conpan>formationpan>al analysis
of antagonpan>ists/inverse agonpan>ists 17, 18, 23, and the agonpan>ists A2, A1, 5, 14 is reported in Supporting
Inpan>formationpan>.
Molecular Toggle Switch
Agonist
binding triggers the
changes in the intracellular region of a GPCR that leads to the activated
state. The CB2R TMH6 flexible hinge (CWXP) residue, W6.48(258), in
the R (inactive) state, has a g χ1 dihedral angle. (Please see Experimental
Section for explanation of Ballesteros–Weinstein
residue nomenclature.) In the Class A GPCR, rhodopsin, the
β-ionone ring of the covalently bound ligand, 11-cis-retinal,
sterically keeps W6.48(265) in a g χ1.[24−26] In the X-ray crystal structure
of a constitutively active rhodopsin mutant, the transition of the
ligand from 11-cis-retinal to all-trans-retinal releases W6.48(265). The β-ionone ring shifts 4.3
Å toward the cleft between TMH5 and TMH6 and the W6.48(265) indole
ring moves 3.6 Å away from its ground-state position when rhodopsin
is activated.[27] Mutation studies have suggested
that F3.36(200) serves the same function in the CB1R as the β-ionone
ring serves in rhodopsin.[28,29] These residues form
a “toggle switch” in which the CB1R F3.36(200) χ1
must undergo a trans → g conformational change in order for the χ1
of W6.48(356) to undergo its g → trans transition. In CB2R, F3.36(117)
appears to serve a similar function in holding W6.48(258) in a g χ1 conformation. Agonist
binding promotes a conformational change in these residues (F3.36(117)
χ1 trans → g ; W6.48(258) χ1 g→ trans). The W6.48 χ1
has not been found in the trans conformation in recent
X-ray crystal structures of GPCR activated states. However, in their
meta-rhodopsin II crystal structure paper, Choe and co-workers note
that the W6.48(265) χ1 g → trans change may be transient and
therefore not captured in the crystalline state.[30] In fact, in molecular dynamics simulations of cannabinoid
CB2R activation by its endogenous ligand (2-AG), we observed such
a transient change in W6.48(258).[31] Interestingly,
while the results of mutagenesis studies suggest that the toggle switch
found in the cannabinoid receptors is comprised of F3.36(117) and
W6.48(265), these residues do not necessarily form the toggle switch
in all GPCRs. For example, Kobilka and co-workers have reported that
in the β2 adrenergic receptor, the residues F6.48(286) and F6.52(290)
may form a rotamer toggle switch that changes conformation upon receptor
activation.[32] These results may suggest
that while the identity of the participating residues may vary, the
functional role of the toggle switch appears to be conserved among
numerous GPCRs.
Glide Docking Studies Suggest the Difference
between Inverse
Agonists and Agonists May Depend on Interaction with Toggle Switch
Glide docking studies in our previously published model of the
CB2R inactive and active states[31] using
the global minimum energy conformer revealed that both the antagonists/inverse
agonists 17, 18, and 23, and
the agonists A2, A1, 5, and 14, bind in the TMH2-3-6-7 region of CB2R. Modeling studies
suggested that the difference between the pharmacology of the CB2R
ligands synthesized here (antagonist/inverse agonist vs agonist) may
be in the ability/inability to block the Toggle Switch W6.48(258)
(χ1 g+ → trans) transition.
Compounds 23 and A1 form an antagonist/agonist
pair of structurally related compounds. Figure 6A,B illustrates the complex of the CB2R with antagonist/inverse agonist 23. Compound 23 binds in the TMH2-3-6-7 region
of CB2R, establishing a hydrogen bond with K3.28(109) via the 1,8-naphthyridinecarbonyl at C2. Compound 23 also forms a hydrogen bond
with S7.39(285) via the carboxamideoxygen. The 1,8-naphthyridine
ring also has a tilted-T aromatic stack with F2.57(87) and a tilted-T
aromatic stack with W5.43(194). The 6 position p-methoxyphenyl
substituent has a direct tilted-T aromatic stack with the aromatic
ring of W6.48(258) and an offset parallel aromatic stack with W5.43(194).
Figure 6
Binding sites and spatial relationship
with W6.48(258) of the antagonist/inverse
agonist 23 and the agonist A1, docked in
CB2R (inactive) model. (A,C) The view is from lipid looking toward
TMH6 and TMH7 (transparent for clarity). 23 is shown
in pink; A1 is shown in blue. Toggle switch residues
are shown in orange; aromatic cluster residues are shown in lavender;
residues that each ligand forms a hydrogen bond with are shown in
yellow. Hydrogen bonds are shown as yellow dashed lines. (B,D) The
view is from lipid looking toward TMH4 and TMH6 (TMH5 is omitted for
clarity). In (B), the p-methoxyphenyl C6 substituent
of 23 penetrates deeply into the binding pocket, deep
enough to block any possible movement of W6.48(258). The ability of
this substituent to block W6.48(258) likely renders 23 an antagonist/inverse agonist. In contrast, in (D) it is clear that A1 does not penetrate the binding pocket deeply enough to
sterically block W6.48(258), permitting this compound to act as an
agonist.
Figure 6C,D illustrates the complex of the
CB2R with the agonpan>ist A1. In the TMH2-3-6-7 region of
CB2R, A1 establishes a hydrogen bond with K3.28(109)
via the 1,8-naphthyridinecarbonyl oxygen at C2 and a hydrogen bond
with S7.39(285) via the carboxamideoxygen. A1 does not
form aromatic stacking interactions with W5.43(194) or W6.48(258).Compounds 23 and A1 differ only in their
C-6 substituent. In 23, the C-6 substituent is a p-methoxyphenyl group, while at A1, the substituent
is hydrogen. Because the 6 position points directly intracellular,
it extends deep enough in the binding pocket to block the movement
of W6.48(258) (χ1 g+ → trans), thus rendering 23 an antagonist/inverse agonist (see
Figure 6B). In contrast, since A1 lacks the large 6-substituent, it does not extend deep enough to
influence W6.48(258), leaving this residue free to change conformation
and therefore for the receptor to activate (see Figure 6D).Similarly, the antagonists/inverse agonists 17 and 18 have large bromo substituents at the
6 position that would
also block toggle switch transition (for compound 17 see Supporting Information, Figure S6), whereas agonists A1, A2, 5, and 14 do
not (see Supporting Information, discussion
on ligand complexes and Figure S5).Binding sites and spatial relationship
with W6.48(258) of the antagonist/inverse
agonist 23 and the agonist A1, docked in
CB2R (inactive) model. (A,C) The view is from lipid looking toward
TMH6 and TMH7 (transparent for clarity). 23 is shown
in pink; A1 is shown in blue. Toggle switch residues
are shown in orange; aromatic cluster residues are shown in lavender;
residues that each ligand forms a hydrogen bond with are shown in
yellow. Hydrogen bonds are shown as yellow dashed lines. (B,D) The
view is from lipid looking toward TMH4 and TMH6 (TMH5 is omitted for
clarity). In (B), the p-methoxyphenyl C6 substituent
of 23 penetrates deeply into the binding pocket, deep
enough to block any possible movement of W6.48(258). The ability of
this substituent to block W6.48(258) likely renders 23 an antagonist/inverse agonist. In contrast, in (D) it is clear that A1 does not penetrate the binding pocket deeply enough to
sterically block W6.48(258), permitting this compound to act as an
agonist.
Conclusion
In
our study, in order to improve the CB2R affinity and selectivity
and to develop an exhaustive structure–activity relationship
(SAR) for the series of 1,8-naphthyridin-2(1H)-one-3-carboxamides
as CB2R ligands, we synthesized and evaluated several new derivatives
belonging to this chemical class. These compounds are characterized
by the same central scaffold and are variously functionalized with
different substituents in position N-1 or C-6. Generally, the new
compounds exhibited good selectivities and remarkable affinities for
the CB2R. In particular, all the 6-substituted analogues showed high
CB2R affinity, with Ki < 4 nM.Furthermore, the functional activity of more representative compounds
was determined by the β-arrestin 2 assay using U2OS cells co-expressing
CB2R and β-arr2/GFP and the forskolin-stimulated cAMP assay.
The potency values (IC50 or EC50) of the novel
compounds measured in functional assays are in the nanomolar range
and are closely correlated with the high-affinity values (expressed
as Ki). An interesting observation in
our SAR is the significant difference in the functional activity between
the 6-substituted derivatives and the compounds lacking this substituent.
In fact, the functionality of this new series of 1,8-naphthyridine
was not affected by several modifications in position N-1, showing
agonist behavior, while all the 6-substituted derivatives tested possess
antagonist/inverse agonist properties at CB2R.To better understand
the SAR results, we performed a docking study
for the tested compounds using a CB2R homology model. In particular,
the complex of CB2R in its inactive state (R) with antagonist and
the complex of CB2R in its activated state (R*) with agonist were
analyzed. The results showed that both the antagonists/inverse agonist
and the agonist bind in the TMH2-3-6-7 regions of CB2R. The difference
between the pharmacology of these ligands (antagonist/inverse agonist
vs agonist) may be in the ability/inability to block the Toggle Switch
W6.48(258) (χ1 g+ → trans) transition. We demonstrated that the substituent at the C-6 position
of the central nucleus is crucial for the functionality, identifying
it as the key molecular feature that discriminates 1,8-naphthyridin-2(1H)-one-3-carboxamide agonists from antagonists/inverse agonists.
Experimental Section
Chemistry
Melting
points were determined on a Kofler
hot-stage apparatus and are uncorrected. 1HNMR and 13CNMR spectra were recorded on a Varian Gemini 200 MHz spectrometer
in δ units with TMS as an internal standard. Mass spectra were
obtained with a Hewlett-Packard MS system 5988. TLC was performed
on silica gel sheets (silica gel 60 F254, Merck, Germany). Microwave-assisted
reactions were run in a CEM microwave synthesizer. The system for
isocratic flash chromatography includes a Buchi Pump Module C-601
(continuous flow of solvents up to 250 mL/min at a maximum of 10 bar)
and Buchi prepacked cartridges (silica gel 60, particle size 40–63
μm).The analytical HPLC system consisted of a Thermo
Finnigan Spectra System SN4000 system controller, coupled to a P2000
pump, a SCM1000 degasser, and a UV2000 UV detector at operation wavelengths
of 220 and 280 nm (Thermo Finnigan, Waltham, MA). Separation was performed
on a 150 mm × 4.6 mm Luna column packed with 5 μm C18 particles.
The mobile phase, delivered at isocratic flow, consisted of methanol
(15–30%) and water (85–70%). HPLC-grade methanol was
acquired from Sigma-Aldrich (Sydney, Australia), and the water used
was of Milli-Q grade purified by a Milli-Q UV purification system
(Millipore Corp., MA). For all compounds, 1.0 mg was dissolved in
2.0 mL of MeOH, and an amount of 20 μL was injected in analytical
HPLC. Comparing the chromatograms, we were able to estimate the purity
of each compound that appeared >96%. High-resolution mass spectra
(HRMS) were recorded on a Thermo Scientific Q Exactive Plus mass spectrometer
(ThermoFisher, Breman, Germany) equipped with an electrospray ionization
source.
General Procedure for the Synthesis of N-1-Substituted N-(4-methylcyclohexyl)-2-oxo-1,2-dihydro-1,8-naphthyridine-3-carboxamide
(1–10)
A solution of 1,8-naphthyridine-3-carboxamide 30 (1.42 g, 5.0 mmol) in anhydrous DMF (20 mL) was treated
with cesium carbonate (0.43 g, 14.0 mmol) at room temperature for
1 h. The appropriate reagent (10.0 mmol) was added, and the mixture
was stirred for 12 h at 50 °C. After cooling, the reaction mixture
was evaporated in vacuo, yielding the crude products
which were purified by crystallization or flash chromatography.
General Procedure
for the Synthesis of the Acids 11–13
A mixture of 0.21 mmol of ester
derivatives 8–10 in 15.0 mL of NaOH
10% was heated at 110 °C for 5 h. After cooling, the reaction
mixture was treated with water and then with concentrated HCl until
pH 2–3. The precipitate formed was filtered and treated with
Et2O to give the acid derivatives 11–13.
General Procedure for the Synthesis of Mesylates 28–30
Triethylamine (0.82 mL,0.526 g,
5.89 mmol) was added at 0 °C to a solutionpan> of suitable alcohol 5–7 (0.98 mmol) and methanesulfonyl chloride
(0.23 mL, 0.34 g, 2.94 mmol) in anhydrous dichloromethane (8.0 mL),
and the mixture was stirred for 6 h at ambient temperature. After
addition of ethyl acetate (30 mL), the mixture was washed with water
(20.0 mL) and then with brine (20.0 mL). The organic layer was dried
over MgSO4 and evaporated to dryness to give a residue
which was purified by flash column chromatography.
General Procedure for the Preparation of
Fluorine Derivatives 14–16
To a solution of suitable
mesylate 28–30 (0.6 mmol) in anhydrous
THF (10 mL) was added tetrabutylammonium fluoride (1.00 N) in THF
(0.35 mL, 0.314 g, 1.2 mmol), and the mixture was refluxed for 4 h.
After cooling, the solvent was removed under vacuum, and the residue
was solubilized in chloroform (10 mL), washed with water (20 mL),
and then washed with brine (20 mL). The organic layer was dried over
MgSO4 and evaporated to dryness to give crude product which
was purified by flash column chromatography.
To
a stirred solution of 2-aminopyridine-3-carboxaldehyde (0.40 g, 3.30
mmol) in 15 mL of glacial acetic acid was added bromine (0.16 mL,
3.16 mmol), and the reaction mixture was stirred at room temperature
for 24 h. The precipitate obtained was filtered off and washed with
ether. The filter cake was poured into water and treated with solid
NaOH until pH 7–8, and the mixture was extracted with dichloromethane.
The organic layer was dried with MgSO4 and evaporated to
dryness under reduced pressure. The crude solid was purified by crystallization
in acetonitrile to give 31 (0.48 g, 73%): mp 147–150
°C; MS m/z 199 (M+). 1HNMR (DMSO): δ 9.83 (s, 1H, CHO), 8.33 (s,
1H, Ar); 8.27 (s,1H, Ar); 5.27 (br, 2H, NH2).
To a solution of 31 (1.50
g, 7.5 mmol) inethanol (20 mL) were added diethyl malonate (1.80
g, 11.25 mmol) and 0.21 mL of piperidine (0.182 g, 2.14 mmol), and
the mixture was stirred under reflux for 20 h. After cooling, the
solid obtained was filtered, washed with ethanol, and dried. The crude
product was used without further purifications (1.99 g, 90%): mp 200–203
°C; MS m/z 296 (M+). 1HNMR (DMSO): δ 12.64 (br, 1H, NH); 8.69 (d, J = 2.2 Hz, 1H, Ar); 8.56 (d, J = 2.2 Hz,
1H, Ar); 8.45 (s, 1H, Ar); 4.28 (q, J = 7.3 Hz, 2H,
CH2); 1.31 (t, J = 7.1 Hz, 3H, CH3).
A mixture of 4 (0.40 g, 1.35
mmol) and 4-methylcyclohexylamine (0.76 g, 6.75 mmol) was heated in
a sealed tube at 150 °C for 24 h. After cooling, the reactionpan>
mixture was treated with diethyl ether to give a solid residue which
was collected by filtration. The product was crystallized from ethyl
acetate (0.32 g, 65%): MS m/z 363
(M+). 1HNMR (DMSO): δ 12.09 (br, 1H,
NH); 10.06 and 9.57 (2m, 1H, NH); 8.73–8.83 (m, 3H, Ar); 4.12
and 3.78 (2m, 1H, CH); 1.90–0.89 (m, 12H, cyclohexyl + CH3).
General Procedure for the Synthesis of 6-Bromo
Derivatives 17 and 18
A solution
of 6-bromo-N-(4-methylcyclo-hexyl)-2-oxo-1,2-dihydro-1,8-naphthyridine-3-carboxamide 33 (1.42 g, 5.0 mmol) in anhydrous DMF (20 mL) was treated
with cesium carbonate (0.43 g, 14.0 mmol) at room temperature for
1 h. The suitable chloride (10 mmol) was added, and the mixture was
stirred for 12 h at 50 °C. After cooling, the reaction mixture
was evaporated in vacuo, yielding the crude products
which were purified by flash chromatography.
trans-6-Bromo-1-(4-fluorobenzyl)-N-(4-methylcyclohexyl)-2-oxo-1,2-dihydro-1,8-naphthyridine-3-carboxamide
(17-trans) and cis-6-Bromo-1-(4-fluorobenzyl)-N-(4-methylcyclohexyl)-2-oxo-1,2-dihydro-1,8-naphthyridine-3-carboxamide
(17-cis)
Compounds 17-trans and 17-cis were
obtained from derivative 17 by flash chromatography onpan>
a silica gel (toluene/ethyl acetate 14:1 and 1% of acetic acid).
General Procedure for the Synthesis of 6-Substituted Derivatives 19–26
A mixture of 50 mg of Ph3P (0.20 mmol) and 10 mg of Pd(OAc)2 (0.04 mmol)
in dioxane (1.0 mL) was stirred under N2 for 10 min. Then
the approriate 6-bromo derivative 17 or 18 (0.41 mmol) in 1 mL of MeOH, 0.85 mL of Na2CO3 (10%), and suitable boronic acid (0.82 mmol) were added. The mixture
was heated by microwave radiation (CEM) at 150 °C for 10 min
(power 200 W, pressure 100 psi, stirring on). The reaction mixture
was then cooled to room temperature, treated with water, and extracted
with dichloromethane. The combined organic layers were washed with
brine, dried over anhydrous sodium sulfate, and evaporated to dryness
to obtain a residue which was purified by flash chromatography on
silica gel.
trans-1-(4-Fluorobenzyl)-6-(furan-2-yl)-N-(4-methylcyclohexyl)-2-oxo-1,2-dihydro-1,8-naphthyridine-3-carboxamide
(22-trans) and cis-1-(4-Fluorobenzyl)-6-(furan-2-yl)-N-(4-methylcyclohexyl)-2-oxo-1,2-dihydro-1,8-naphthyridine-3-carboxamide
(22-cis)
Compounds 22-trans and 22-cis were
obtained from derivative 22 by flash chromatography onpan>
a silica gel (toluene/ethyl acetate 8:1).
The new compounds
were evaluated in CB1R and CB2R binding assays using membranes from
HEK-293 cells transfected with cDNAs encoding the human recombinant
CB1R (Bmax = 2.5 pmol/mg protein) and
human recombinant CB2R (Bmax = 4.7 pmol/mg
protein) (Perkin-Elmer, Italy). These membranes were incubated with
[3H]-(−)-cis-3-[2-hydroxy-4-(1,1-dimethylheptyl)phenyl]-trans-4-(3-hydroxypropyl)cyclohexanol ([3H]CP-55,940)
(0.14 nM/Kd = 0.18 nM and 0.084 nM/Kd = 0.31 nM for CB1R and CB2R, respectively)
as high-affinity ligand[33] and displaced
with 100 nM (R)-(+)-[2,3-dihydro-5-methyl-3-(4-morpholinylmethyl)pyrrolo[1,2,3-de]-1,4-benzoxazin-6-yl]-1-naphthalenylmethanone (WIN-55,212-2)[34] as heterologous competitor for nonspecific binding
(Ki = 9.2 and 2.1 nM, respectively, for
CB1R and CB2R). All compounds were tested following the procedure
described by the cell membrane manufacturer.[35]CB1R binding protocol involves the use of the same solution
buffer used for both incubation and washing reaction (Tris-HCl, 50
mM; EDTA, 2.5 mM; MgCl2, 2.5 mM; BSA, 0.5 mg/mL at pH 7.4),
0.4 nM for [3H]CP-55,940, test compounds (concentrations
from 0.001 to 10 μM), and finally 8 μg/sample membrane
in a total volume of 200 μL. CB2R binding assays were carried
out with two different buffers: incubation buffer (Tris-HCl, 50 mM;
EGTA, 2.5 mM; MgCl2, 5 mM; BSA, 1 mg/mL at pH 7.4) and
washing buffer (Tris-HCl, 50 mM; EGTA, 2.5 mM; MgCl2, 5
mM; BSA, 2% at pH 7.4). The assay mixture contained incubation buffer,
0.4 nM [3H]CP-55,940, test substances (concentrations from
0.001 to 10 μM), and 4 μg/sample membrane in a total assay
volume of 600 μL. Assay tubes were prepared in duplicate and
incubated for 90 min at 30 °C. The reaction was terminated by
addition of ice-cold buffer followed by rapid filtration under vacuum
through Whatman GF/C filters (pretreated for 2 h with 0.05% aqueous
polyethyleneimine) using a 12-well harvester from Millipore. After
washing, radioactivity associated with the filters was counted on
a liquid scintillation analyzer (Tri-Carb 2100 TR, Perkin-Elmer).
Specific binding was determined by subtracting nonspecific binding
from total binding in the absence of competing ligand. The percentage
displacement of specific binding was calculated for the amount of
radiolabel bound in the presence of unlabeled displacing ligand. Displacement
IC50 values were determined by linear regression analysis
of log concentration–percent displacement data using GraphPad
Prism. Ki values were calculated by applying
the Cheng–Prusoff equation, Ki =
IC50/(1 + L/KD), where L is the concentration of the radioligand,
IC50 is the concentration of drug causing 50% inhibition
of specific radioligand binding, and KD is the dissociation constant of the radioligand–receptor
complex. Data are the mean ± SEM of at least n = 3 experiments.[36]
Cell Line
U2OS cells (osteosarcoma cell line) permanently
expressing h-CB2R and βarr2-GFP (green fluorescent
protein) were obtained from Drs. Larry Barak and Marc Caron (Duke
University). They were maintained at 37 °C in a humidified atmosphere
containing 5% CO2 in Dulbecco’s modified Eagle medium
nutrient mixture F-12 HAM, supplemented with 10% fetal bovine serum,
0.6% zeocin, and 400 mg/mL of G418. Cells were then harvested using
trypsin-EDTA (Gibco catalog number 25300-054), and viable cells were
assessed using trypan blue dye exclusion.
β-Arrestin Assay
The assays were performed using
a procedure described previously.[22] U2OS
cells permanently expressing h-CB2R and βarr2-GFP
were detached using trypsin-EDTA, seeded onto glass coverslips at
80–85% confluence, and placed in 24-well plates (BD Falcon).
After incubation at 37 °C (5% CO2, 95% relative humidity)
overnight, cells were washed with Hanks’s balanced salt solution
(HBSS) before drug application. Test compounds and reference cannabinoid
compounds were dissolved in DMSO, and dilutions were made in HBSS.
In order to detect agonist-stimulated redistribution of βarr2-GFP,
the cells were stimulated with various concentrations drug at room
temperature for 40 min. Then the suspension was removed, paraformaldehyde
(4% in HBSS, p/v) was added, and the incubation continued at room
temperature for 25 min. Finally the cells were washed with PBS three
times and once with double-distilled water. The antagonism protocol
included 15 min of pre-incubation with the antagonist, followed by
a 40 min co-incubation of antagonist and agonist (30 nM WIN-55,212-2).
Glass coverslips were mounted onto slides and imaged using a fluorescence
microscope (Nikon E1000; Tokyo, Japan) using a 40× oil objective
and 488 nm excitation for GFP. The redistribution of diffuse β-arrestin-GFP
from the cytoplasm to agonist- or antagonist-occupied receptor-containing
pits or vesicles was imaged using a fluorescence microscope (Nikon
E1000; using a 40× oil objective and 488 nm excitation for GFP,
Tokyo, Japan). The RGB color images captured from the fluorescent
microscope were transformed into 8-bit gray-scale images using the
Automate-Batch function in Adobe Photoshop CS5. To quantify βarr2-GFP
aggregates, gray-scale images were processed through ImageJ software
(http://rsbweb.nih.gov/ij/), using a custom-written plug-in
provided by Pingwei Zhao (Temple University). Curves were fit by nonlinear
regression using the sigmoidal dose–response equation in GraphPad
Prism Version 5.0 (GraphPad, San Diego, CA). Activity values were
normalized to the agonist’s response (30 nM WIN-55,212-2 was
considered as 100%).
cAMP Assay
These assays were performed
using LANCE Ultra cAMP kit (catalog number TRF0262;
Perkin-Elmer Inc.,
Boston, MA) according to the manufacturer’s protocol.U2OS cells expressing the hCB2R were detached using trypsin-EDTA,
washed with HBSS, and counted, and cell viability was determined using
Trypan Blue stain. Cells were resuspended in stimulation buffer (HBSS,
1X; BSA stabilizer, 0.1%; IBMX, 0.5 mM; HEPES, 5 mM; pH 7.4) at a
concentration of 600 cells/μL. In order to detect the agonist-induced
reduction in cAMP levels, 5 μL of the cell suspension (3000
cells/well) was stimulated with forskolin (10 μM final concentration)
and with various concentrations of test ligands in white Optiplate-384
wells at room temperature for 30 min. Functional antagonism of the
cannabinoid CB2R antagonist response was measured by incubating the
suspension cells with drug dilutions, forskolin (10 μM final
concentration), and the reference agonist WIN-55,212-2 (30 nM final
concentration) at room temperature for 30 min. After the incubation,
5 μL of europium chelated labeled cAMP tracer solution in detection
buffer and then 5 μL of the cAMP-specific monoclonal antibodies
(labeled with ULight-dye) solution in detection buffer
were added to the wells. The reaction was allowed to incubate for
1 h at room temperature in the dark. Time-resolved fluorescence signals
were detected on an EnVision multiplate reader (Perkin-Elmer, CA,USA)
at 615 and 665 nm emission. The amounts of cAMPproduced in the stimulated
cells were determined according to the cAMP standard curves. Antagonism
in the cAMP assay has been expressed as percent of inhibition of WIN-55,212-2.
Inhibition curves were analyzed by nonlinear regression using GraphPad
Prism Version 5.0 software (GraphPad, San Diego, CA), and data were
fitted to sigmoidal concentration–response curves to obtain
IC50 values. Also for agonist, the sigmoidal dose–response
equation was used to determine EC50 values. In this case,
the logarithmic value of agonist concentrations is plotted against
the TR-FRET signal normalized to the response of forskolin.
Ballesteros–Weinstein
Nomenclature
Here, the
Ballesteros–Weinstein numbering system for GPCR amino acid
rersidues is used. In this numbering system, the label 0.50 is assigned
to the most highly conserved Class A residue in each transmembrane
helix (TMH).[37] This is preceded by the
TMH number. In this system, for example, the most highly conserved
residue in TMH6 is P6.50. The residue immediately before this would
be labeled 6.49, and the residue immediately after this would be labeled
6.51. When referring to a specific CB2 residue, the Ballesteros–Weinstein
name is followed by the absolute sequence number given in parentheses
(e.g., K3.28(109)); however, when referring to a highly conserved
residue among Class A GPCRs (and not a specific residue in CB2), only
the Ballesteros–Weinstein name is given.
Modeling Methods
Conformational
Search
The structures of ligands were
built in Spartan’08 (Wave function, Inc., Irvine, CA). Initial
conformational analyses of these compounds were performed using the
semiempirical method AM1 encoded in Spartan’08. Conformational
searches were performed (using 3–8-fold rotations) for each
rotatable bond. All unique conformers identified were then optimized
with ab initio Hartree–Fock calculations at the 6-31G* level,
except for 17 and 18, which required 6-311G*
to accommodate a bromine atom. To calculate the difference in energy
between the global minimum energy conformer of each compound and its
final docked conformation, rotatable bonds in the global minimum energy
conformer were driven to their corresponding value in the final docked
conformation, and the single-point energy of the resultant structure
was calculated at the HF 6-31G* level, or for 17 and 18 at the 6-311G* level.
Model Development
Complete details on the generation
of the inactive and activated state CB2R models used here are available
in our previous publication.[31] We provide
a synopsis below.
CB2R Inactive State Model
The crystal
structure of
the Class A GPCR, rhodopsin in the dark state was used as the template
for the creation of our CB2R inactive state model.[26] This template was chosen because no mutations or modifications
were made to its structure for crystallization. In addition, the cannabinoid
receptors and rhodopsin share some unusual sequence motifs. These
receptors share a TMH4 GWNC motif at their extracellular ends. Here
a TRP forms an aromatic stacking interaction with Y5.39, influencing
the EC positions of TMH3-4-5. The initial homology model was refined
by calculating the low free energy conformations for any TMH with
an important sequence divergence from rhodopsin and replacing the
corresponding helix from the initial model with one that more accurately
reflects the sequence dictated TMH geometries in CB2R. This includes
TMH2 (GG helix distorting motif in Rho vs no PRO or GG in CB2R) and
TMH5 (PRO at 5.50 in Rho vs no PRO at 5.50 in CB2R). The resultant
CB2R model has been tested using results from substituted cysteine
accessibility studies to identify binding pocket facing residues,[38,39] from mutation studies of key ligand interactions sites,[38−41] and from covalent labeling studies of CB2R[42] that support a lipid entry pathway for CB2R ligands.To permit
adjustment to a lipid bilayer environment, the resultant model was
pre-equilibrated in a stearoyl-docosahexaenoylphosphatidylcholine
(SDPC) bilayer for 300 ns.[31] While the
toggle switch residue, W6.48(258), remained in its inactive state g χ1 dihedral
angle after the equilibration in SDPC, some notable changes did occur
during this equilibration. The R3.50(131) and D6.30(240) salt bridge
at the intracellular ends of TMHs3/6 (analogous to the R3.50(135)/E6.30(247)
salt bridge in the dark state of rhodopsin) rearranged quickly to
form a salt bridge between R3.55(136) and D6.30(240), with Y3.51(132)
supporting the salt bridge by hydrogen bonding to the exposed backbone
carbonyl of L6.29(239). A second notable change was the development
of additional helical turns in the IC-3 (TMH5-TMH6) loop after the
original end of TMH5.[31]
CB2R Activated
State Model
The CB2R activated state
model (R*) used here for docking studies was produced from the inactive
state model described above via a multimicrosecond-long molecular
dynamics simulation of the interaction of the endogenous CB2R ligand,
2-AG, with CB2R in a palmitoyl-oleoyl-phosphatidylcholine (POPC) bilayer.
In these simulations, 2-AG entered the binding pocket via the lipid
bilayer between TMH6 and TMH7 and activated the CB2R. Ligand entry
resulted in changes on the intracellular end of the receptor. Here
the R3.55(136)/D6.30(240) ionic lock was broken as TMH6 straightened
and moved its IC end away from the TMH bundle. Ligand entry also resulted
in changes in the binding pocket, as toggle switch residue W6.48(258)
underwent a χ1 torsion angle change from g to trans. This change was transitory, with W6.48(258) reverting to a g+ χ1. The R* model used for docking studies
here was taken from the section of the trajectory in which the W6.48(258)
χ1 was trans.(31)
Ligand/CB2R Complexes
The inactive
state model was
used to dock compounds 17, 18, and 23, while A1, A2, 5, and 14 were docked in the activated state model described
above. In addition, to probe the origins of the antagonism vs agonism
of 23 and A1, each compound was docked in
our CB2R inactive state model. The automatic docking program Glide
v5.8 (Schrodinger Inc., Portland, OR) was used to explore possible
binding conformations or receptor site interactions with flexible
docking.[31,32] Because S7.39(285) has been shown to be
a ligand interaction site in CB2R,[37] S7.39(285)
was defined as a required interaction during the initial flexible
docking procedure. Glide was used to generate a grid based on the
centroid of the ligand in the binding site. Any hydrophobic region
defined in the grid generation that contacted the ligand was selected
as important to the flexible docking procedure. The box for flexible
docking was defined to be 26 Å in the x, y, and z dimensions. Extra precision (XP)
was selected with scaling of VdW radii and flexible docking invoked.[34] These Glide docking studies consistently identified
an interaction with K3.28(109). A second Glide docking study was initiated
in which K3.28(109) and S7.39(285) were defined as required interactions
during the flexible docking procedure. Extra precision (XP) was selected
and flexible docking invoked. This second run resulted in improved
Glide scores, particularly for ligands with higher CB2R binding affinities.For each receptor–ligand complex, the complex with the best
Glide score was minimized using the OPLS2005 all-atom force field
in Macromodel 9.9 (Schrodinger Inc.). An 8.0 Å nonbonded cutoff
(updated every 10 steps), a 20.0 Å electrostatic cutoff, and
a 4.0 Å hydrogen bond cutoff were used in each stage of the calculation.
The first stage consisted of 3500 steps of Polak–Ribier conjugate
gradient minimization using a distance-dependent dielectric function
with a base constant of 2. No harmonic constraints were placed on
the side chains, but 100 kJ/mol torsional constraints were applied
to hold all the backbone ϕ/ψ torsion angles. During the
second stage of 500 steps, all torsional constraints were released.
To relax the loops, an additional 1000-step Polak–Ribier conjugate
gradient minimization of the loop regions was performed. The loop
and termini regions were left free, while the transmembrane regions
were not allowed to move during this final minimization. An 8.0 Å
extended nonbonded cutoff (updated every 10 steps), 20.0 Å electrostatic
cutoff, and 4.0 Å hydrogen bond cutoff were used in this calculation,
and the generalized Born/surface area (GB/SA) continuum solvation
model for water available in Macromodel was employed.
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