Literature DB >> 25271714

Overview of cell-free protein synthesis: historic landmarks, commercial systems, and expanding applications.

Shaorong Chong1.   

Abstract

During the early days of molecular biology, cell-free protein synthesis played an essential role in deciphering the genetic code and contributed to our understanding of translation of protein from messenger RNA. Owing to several decades of major and incremental improvements, modern cell-free systems have achieved higher protein synthesis yields at lower production costs. Commercial cell-free systems are now available from a variety of material sources, ranging from "traditional" E. coli, rabbit reticulocyte lysate, and wheat germ extracts, to recent insect and human cell extracts, to defined systems reconstituted from purified recombinant components. Although each cell-free system has certain advantages and disadvantages, the diversity of the cell-free systems allows in vitro synthesis of a wide range of proteins for a variety of downstream applications. In the post-genomic era, cell-free protein synthesis has rapidly become the preferred approach for high-throughput functional and structural studies of proteins and a versatile tool for in vitro protein evolution and synthetic biology. This unit provides a brief history of cell-free protein synthesis and describes key advances in modern cell-free systems, practical differences between widely used commercial cell-free systems, and applications of this important technology.
Copyright © 2014 John Wiley & Sons, Inc.

Entities:  

Keywords:  artificial cell; cell-free protein synthesis; high throughput; in vitro protein evolution; isotope labeling; unnatural amino acid

Mesh:

Year:  2014        PMID: 25271714      PMCID: PMC4211078          DOI: 10.1002/0471142727.mb1630s108

Source DB:  PubMed          Journal:  Curr Protoc Mol Biol        ISSN: 1934-3647


  119 in total

Review 1.  Man-made enzymes--from design to in vitro compartmentalisation.

Authors:  A D Griffiths; D S Tawfik
Journal:  Curr Opin Biotechnol       Date:  2000-08       Impact factor: 9.740

Review 2.  Ribosomal production and in vitro selection of natural product-like peptidomimetics: the FIT and RaPID systems.

Authors:  Christopher J Hipolito; Hiroaki Suga
Journal:  Curr Opin Chem Biol       Date:  2012-03-06       Impact factor: 8.822

3.  The wheat germ cell-free expression system: methods for high-throughput materialization of genetic information.

Authors:  Tatsuya Sawasaki; Mudeppa D Gouda; Takayasu Kawasaki; Takafumi Tsuboi; Yuzuru Tozawa; Kazuyuki Takai; Yaeta Endo
Journal:  Methods Mol Biol       Date:  2005

Review 4.  Methods for high-throughput materialization of genetic information based on wheat germ cell-free expression system.

Authors:  Tatsuya Sawasaki; Ryo Morishita; Mudeppa D Gouda; Yaeta Endo
Journal:  Methods Mol Biol       Date:  2007

5.  Membrane protein expression in cell-free systems.

Authors:  Birgit Schneider; Friederike Junge; Vladimir A Shirokov; Florian Durst; Daniel Schwarz; Volker Dötsch; Frank Bernhard
Journal:  Methods Mol Biol       Date:  2010

6.  In vitro RNA synthesis with SP6 RNA polymerase.

Authors:  P A Krieg; D A Melton
Journal:  Methods Enzymol       Date:  1987       Impact factor: 1.600

7.  Isolation and characterization of ribonuclease I mutants of Escherichia coli.

Authors:  R F Gesteland
Journal:  J Mol Biol       Date:  1966-03       Impact factor: 5.469

8.  Robust microarray production of freshly expressed proteins in a human milieu.

Authors:  Fernanda Festa; Sean M Rollins; Krishna Vattem; Margarita Hathaway; Phillip Lorenz; Eliseo A Mendoza; Xiaobo Yu; Ji Qiu; Greg Kilmer; Penny Jensen; Brian Webb; Ed T Ryan; Joshua LaBaer
Journal:  Proteomics Clin Appl       Date:  2013-05-17       Impact factor: 3.494

9.  Comparison of Escherichia coli and rabbit reticulocyte ribosome display systems.

Authors:  J Hanes; L Jermutus; C Schaffitzel; A Plückthun
Journal:  FEBS Lett       Date:  1999-04-30       Impact factor: 4.124

10.  Establishment and characterization of cell-free translation/glycosylation in insect cell (Spodoptera frugiperda 21) extract prepared with high pressure treatment.

Authors:  H Tarui; M Murata; I Tani; S Imanishi; S Nishikawa; T Hara
Journal:  Appl Microbiol Biotechnol       Date:  2001-05       Impact factor: 4.813

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  17 in total

1.  One-pot system for synthesis, assembly, and display of functional single-span membrane proteins on oil-water interfaces.

Authors:  Peter J Yunker; Haruichi Asahara; Kuo-Chan Hung; Corey Landry; Laura R Arriaga; Ilke Akartuna; John Heyman; Shaorong Chong; David A Weitz
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-31       Impact factor: 11.205

Review 2.  Cell-Free Synthetic Biology: Engineering Beyond the Cell.

Authors:  Jessica G Perez; Jessica C Stark; Michael C Jewett
Journal:  Cold Spring Harb Perspect Biol       Date:  2016-12-01       Impact factor: 10.005

3.  The cell free protein synthesis system from the model filamentous fungus Neurospora crassa.

Authors:  Cheng Wu; Ananya Dasgupta; Lunda Shen; Deborah Bell-Pedersen; Matthew S Sachs
Journal:  Methods       Date:  2017-12-30       Impact factor: 3.608

Review 4.  Non-conventional expression systems for the production of vaccine proteins and immunotherapeutic molecules.

Authors:  Isabelle Legastelois; Sophie Buffin; Isabelle Peubez; Charlotte Mignon; Régis Sodoyer; Bettina Werle
Journal:  Hum Vaccin Immunother       Date:  2016-12-01       Impact factor: 3.452

5.  Genetically encoded amino acids with tert-butyl and trimethylsilyl groups for site-selective studies of proteins by NMR spectroscopy.

Authors:  Choy Theng Loh; Luke A Adams; Bim Graham; Gottfried Otting
Journal:  J Biomol NMR       Date:  2017-12-02       Impact factor: 2.835

6.  Cell-free Translation: Preparation and Validation of Translation-competent Extracts from Saccharomyces cerevisiae.

Authors:  Brandon M Trainor; Anton A Komar; Dimitri G Pestov; Natalia Shcherbik
Journal:  Bio Protoc       Date:  2021-09-20

7.  High-yield production of "difficult-to-express" proteins in a continuous exchange cell-free system based on CHO cell lysates.

Authors:  Lena Thoring; Srujan K Dondapati; Marlitt Stech; Doreen A Wüstenhagen; Stefan Kubick
Journal:  Sci Rep       Date:  2017-09-15       Impact factor: 4.379

8.  Cellular reagents for diagnostics and synthetic biology.

Authors:  Sanchita Bhadra; Arti Pothukuchy; Raghav Shroff; Austin W Cole; Michelle Byrom; Jared W Ellefson; Jimmy D Gollihar; Andrew D Ellington
Journal:  PLoS One       Date:  2018-08-15       Impact factor: 3.240

9.  A reproducible and scalable procedure for preparing bacterial extracts for cell-free protein synthesis.

Authors:  Kazushige Katsura; Takayoshi Matsuda; Yuri Tomabechi; Mayumi Yonemochi; Kazuharu Hanada; Noboru Ohsawa; Kensaku Sakamoto; Chie Takemoto; Mikako Shirouzu
Journal:  J Biochem       Date:  2017-11-01       Impact factor: 3.387

Review 10.  Establishing Preferred Product Characterization for the Evaluation of RNA Vaccine Antigens.

Authors:  Cristina Poveda; Amadeo B Biter; Maria Elena Bottazzi; Ulrich Strych
Journal:  Vaccines (Basel)       Date:  2019-09-27
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