Literature DB >> 25270020

Complete genome sequence of the methanogenic neotype strain Methanobacterium formicicum MF(T.).

Irena Maus1, Robbin Stantscheff2, Daniel Wibberg1, Yvonne Stolze1, Anika Winkler1, Alfred Pühler1, Helmut König2, Andreas Schlüter3.   

Abstract

The neotype strain Methanobacterium formicicum MF(T) (DSM1535), a hydrogenotrophic methanogenic Archaeon, was isolated from a domestic sewage sludge digestor in Urbana (IL, USA). Here, the complete genome sequence of the methanogen is reported. The genome is 2,478,074bp in size, featuring a GC content of 41.23%. M. formicicum MF(T) encodes several genes predicted to be involved in adaptation to abiotic stress such as high osmolarity. The strain MF(T) is of biotechnological importance since M. formicicum strains are often found in production-scale biogas plants and it is suggested as a starter culture for the anaerobic biomethanation process.
Copyright © 2014 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Biogas production; Compatible solute synthesis; Inoculant culture; Methanogenesis

Mesh:

Substances:

Year:  2014        PMID: 25270020     DOI: 10.1016/j.jbiotec.2014.09.018

Source DB:  PubMed          Journal:  J Biotechnol        ISSN: 0168-1656            Impact factor:   3.307


  5 in total

1.  An assemblage of Frankia Cluster II strains from California contains the canonical nod genes and also the sulfotransferase gene nodH.

Authors:  Thanh Van Nguyen; Daniel Wibberg; Kai Battenberg; Jochen Blom; Brian Vanden Heuvel; Alison M Berry; Jörn Kalinowski; Katharina Pawlowski
Journal:  BMC Genomics       Date:  2016-10-12       Impact factor: 3.969

2.  acdc - Automated Contamination Detection and Confidence estimation for single-cell genome data.

Authors:  Markus Lux; Jan Krüger; Christian Rinke; Irena Maus; Andreas Schlüter; Tanja Woyke; Alexander Sczyrba; Barbara Hammer
Journal:  BMC Bioinformatics       Date:  2016-12-20       Impact factor: 3.169

3.  Integration event induced changes in recombinant protein productivity in Pichia pastoris discovered by whole genome sequencing and derived vector optimization.

Authors:  Jan-Philipp Schwarzhans; Daniel Wibberg; Anika Winkler; Tobias Luttermann; Jörn Kalinowski; Karl Friehs
Journal:  Microb Cell Fact       Date:  2016-05-20       Impact factor: 5.328

Review 4.  Methanobacterium formicicum as a target rumen methanogen for the development of new methane mitigation interventions: A review.

Authors:  P Chellapandi; M Bharathi; C Sangavai; R Prathiviraj
Journal:  Vet Anim Sci       Date:  2018-09-13

5.  Genomics and prevalence of bacterial and archaeal isolates from biogas-producing microbiomes.

Authors:  Irena Maus; Andreas Bremges; Yvonne Stolze; Sarah Hahnke; Katharina G Cibis; Daniela E Koeck; Yong S Kim; Jana Kreubel; Julia Hassa; Daniel Wibberg; Aaron Weimann; Sandra Off; Robbin Stantscheff; Vladimir V Zverlov; Wolfgang H Schwarz; Helmut König; Wolfgang Liebl; Paul Scherer; Alice C McHardy; Alexander Sczyrba; Michael Klocke; Alfred Pühler; Andreas Schlüter
Journal:  Biotechnol Biofuels       Date:  2017-11-13       Impact factor: 6.040

  5 in total

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