Literature DB >> 25264035

Rahnella victoriana sp. nov., Rahnella bruchi sp. nov., Rahnella woolbedingensis sp. nov., classification of Rahnella genomospecies 2 and 3 as Rahnella variigena sp. nov. and Rahnella inusitata sp. nov., respectively and emended description of the genus Rahnella.

Carrie Brady1, Gavin Hunter2, Susan Kirk2, Dawn Arnold3, Sandra Denman2.   

Abstract

Isolations from oak symptomatic of Acute Oak Decline, alder and walnut log tissue, and buprestid beetles in 2009-2012 yielded 32 Gram-negative bacterial strains showing highest gyrB sequence similarity to Rahnella aquatilis and Ewingella americana. Multilocus sequence analysis (using partial gyrB, rpoB, infB and atpD gene sequences) delineated the strains into six MLSA groups. Two MLSA groups contained reference strains of Rahnella genomospecies 2 and 3, three groups clustered within the Rahnella clade with no known type or reference strains and the last group contained the type strain of E. americana. DNA-DNA relatedness assays using both the microplate and fluorometric methods, confirmed that each of the five Rahnella MLSA groups formed separate taxa. Rahnella genomospecies 2 and 3 were previously not formally described due to a lack of distinguishing phenotypic characteristics. In the present study, all five Rahnella MLSA groups were phenotypically differentiated from each other and from R. aquatilis. Therefore we propose to classify the strains from symptomatic oak, alder and walnut and buprestid beetles as: Rahnella victoriana sp. nov. (type strain FRB 225(T)=LMG 27717(T)=DSM 27397(T)), Rahnella variigena sp. nov. (previously Rahnella genomosp. 2, type strain CIP 105588(T)=LMG 27711(T)), Rahnella inusitata sp. nov. (previously Rahnella genomosp. 3, type strain DSM 30078(T)=LMG 2640(T)), Rahnella bruchi sp. nov. (type strain FRB 226(T)=LMG 27718(T)=DSM 27398(T)) and Rahnella woolbedingensis sp. nov. (type strain FRB 227(T)=LMG 27719(T)=DSM 27399(T)). Crown
Copyright © 2014. Published by Elsevier GmbH. All rights reserved.

Entities:  

Keywords:  Acute Oak Decline; Agrilus biguttatus; Enterobacteriaceae; MLSA; Rahnella; Taxonomy

Mesh:

Substances:

Year:  2014        PMID: 25264035     DOI: 10.1016/j.syapm.2014.09.001

Source DB:  PubMed          Journal:  Syst Appl Microbiol        ISSN: 0723-2020            Impact factor:   4.022


  10 in total

Review 1.  What's in a Name? New Bacterial Species and Changes to Taxonomic Status from 2012 through 2015.

Authors:  Erik Munson; Karen C Carroll
Journal:  J Clin Microbiol       Date:  2016-12-28       Impact factor: 5.948

Review 2.  An Update on the Novel Genera and Species and Revised Taxonomic Status of Bacterial Organisms Described in 2016 and 2017.

Authors:  Erik Munson; Karen C Carroll
Journal:  J Clin Microbiol       Date:  2019-01-30       Impact factor: 5.948

3.  N-acyl-homoserine lactone produced by Rahnella inusitata isolated from the gut of Galleria mellonella influences Salmonella phenotypes.

Authors:  Leonardo Luiz de Freitas; Deisy Guimarães Carneiro; Gabriel Silva Oliveira; Maria Cristina Dantas Vanetti
Journal:  Braz J Microbiol       Date:  2022-01-20       Impact factor: 2.214

Review 4.  Taxonomy and identification of bacteria associated with acute oak decline.

Authors:  Carrie Brady; Dawn Arnold; James McDonald; Sandra Denman
Journal:  World J Microbiol Biotechnol       Date:  2017-06-16       Impact factor: 3.312

5.  El Niño drives a widespread ulcerative skin disease outbreak in Galapagos marine fishes.

Authors:  Robert W Lamb; Franz Smith; Anaide W Aued; Pelayo Salinas-de-León; Jenifer Suarez; Marta Gomez-Chiarri; Roxanna Smolowitz; Cem Giray; Jon D Witman
Journal:  Sci Rep       Date:  2018-11-09       Impact factor: 4.379

6.  Genomic analysis of bacteria in the Acute Oak Decline pathobiome.

Authors:  James Doonan; Sandra Denman; Justin A Pachebat; James E McDonald
Journal:  Microb Genom       Date:  2019-01

7.  Brenneria goodwinii growth in vitro is improved by competitive interactions with other bacterial species associated with Acute Oak Decline.

Authors:  Carrie Brady; Mario Orsi; James M Doonan; Sandra Denman; Dawn Arnold
Journal:  Curr Res Microb Sci       Date:  2021-12-20

8.  Comparative Genomics Assisted Functional Characterization of Rahnella aceris ZF458 as a Novel Plant Growth Promoting Rhizobacterium.

Authors:  Shuai Xu; Yurong Zhao; Yue Peng; Yanxia Shi; Xuewen Xie; Ali Chai; Baoju Li; Lei Li
Journal:  Front Microbiol       Date:  2022-04-04       Impact factor: 6.064

9.  The Microbiome of the 'Williams' Pear Variety Grown in the Organic Orchard and Antifungal Activity by the Autochthonous Bacterial and Yeast Isolates.

Authors:  Tamara Janakiev; Tanja Berić; Tatjana Stević; Slaviša Stanković; Jasmina Bačić; Helena Majstorović; Djordje Fira; Ivica Dimkić
Journal:  Microorganisms       Date:  2022-06-24

10.  Microbiome and infectivity studies reveal complex polyspecies tree disease in Acute Oak Decline.

Authors:  Sandra Denman; James Doonan; Emma Ransom-Jones; Martin Broberg; Sarah Plummer; Susan Kirk; Kelly Scarlett; Andrew R Griffiths; Maciej Kaczmarek; Jack Forster; Andrew Peace; Peter N Golyshin; Francis Hassard; Nathan Brown; John G Kenny; James E McDonald
Journal:  ISME J       Date:  2017-10-13       Impact factor: 11.217

  10 in total

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