Literature DB >> 25263703

A-to-I editing on tRNAs: biochemical, biological and evolutionary implications.

Adrian Gabriel Torres1, David Piñeyro1, Liudmila Filonava1, Travis H Stracker1, Eduard Batlle2, Lluis Ribas de Pouplana3.   

Abstract

Inosine on transfer RNAs (tRNAs) are post-transcriptionally formed by a deamination mechanism of adenosines at positions 34, 37 and 57 of certain tRNAs. Despite its ubiquitous nature, the biological role of inosine in tRNAs remains poorly understood. Recent developments in the study of nucleotide modifications are beginning to indicate that the dynamics of such modifications are used in the control of specific genetic programs. Likewise, the essentiality of inosine-modified tRNAs in genome evolution and animal biology is becoming apparent. Here we review our current understanding on the role of inosine in tRNAs, the enzymes that catalyze the modification and the evolutionary link between such enzymes and other deaminases.
Copyright © 2014 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Adenosine deaminase acting on tRNA; Codon usage; Deaminase; Evolution; Inosine; Transfer RNA

Mesh:

Substances:

Year:  2014        PMID: 25263703     DOI: 10.1016/j.febslet.2014.09.025

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  52 in total

Review 1.  How tRNAs dictate nuclear codon reassignments: Only a few can capture non-cognate codons.

Authors:  Martin Kollmar; Stefanie Mühlhausen
Journal:  RNA Biol       Date:  2017-01-17       Impact factor: 4.652

2.  Novel Missense Variants in ADAT3 as a Cause of Syndromic Intellectual Disability.

Authors:  Elizabeth Thomas; Andrea M Lewis; Yaping Yang; Sirisak Chanprasert; Lorraine Potocki; Daryl A Scott
Journal:  J Pediatr Genet       Date:  2019-07-09

Review 3.  The tRNA regulome in neurodevelopmental and neuropsychiatric disease.

Authors:  Jennifer Blaze; Schahram Akbarian
Journal:  Mol Psychiatry       Date:  2022-05-03       Impact factor: 15.992

Review 4.  tRNA modification dynamics from individual organisms to metaepitranscriptomics of microbiomes.

Authors:  Wen Zhang; Marcus Foo; A Murat Eren; Tao Pan
Journal:  Mol Cell       Date:  2022-01-14       Impact factor: 17.970

Review 5.  Targeted RNA editing: novel tools to study post-transcriptional regulation.

Authors:  Weijin Xu; Jeetayu Biswas; Robert H Singer; Michael Rosbash
Journal:  Mol Cell       Date:  2021-11-04       Impact factor: 17.970

6.  tRNA ADENOSINE DEAMINASE 3 is required for telomere maintenance in Arabidopsis thaliana.

Authors:  Sreyashree Bose; Ana Victoria Suescún; Jiarui Song; Claudia Castillo-González; Behailu Birhanu Aklilu; Erica Branham; Ryan Lynch; Dorothy E Shippen
Journal:  Plant Cell Rep       Date:  2020-09-21       Impact factor: 4.570

7.  Variants of ubiquitin-specific peptidase 24 play a crucial role in lung cancer malignancy.

Authors:  Y-C Wang; S-A Wang; P-H Chen; T-I Hsu; W-B Yang; Y-P Chuang; W-C Su; H-J Liaw; W-C Chang; J-J Hung
Journal:  Oncogene       Date:  2015-11-16       Impact factor: 9.867

8.  Codon adaptation to tRNAs with Inosine modification at position 34 is widespread among Eukaryotes and present in two Bacterial phyla.

Authors:  Àlbert Rafels-Ybern; Adrian Gabriel Torres; Xavier Grau-Bove; Iñaki Ruiz-Trillo; Lluís Ribas de Pouplana
Journal:  RNA Biol       Date:  2017-09-26       Impact factor: 4.652

Review 9.  Oxidative Stress in Bacteria and the Central Dogma of Molecular Biology.

Authors:  Michel Fasnacht; Norbert Polacek
Journal:  Front Mol Biosci       Date:  2021-05-10

Review 10.  Long Non-Coding RNA Epigenetics.

Authors:  Marek Kazimierczyk; Jan Wrzesinski
Journal:  Int J Mol Sci       Date:  2021-06-07       Impact factor: 5.923

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