Literature DB >> 25261514

A highly diastereoselective oxidant contributes to Ligninolysis by the white rot basidiomycete Ceriporiopsis subvermispora.

Daniel J Yelle1, Alexander N Kapich2, Carl J Houtman1, Fachuang Lu3, Vitaliy I Timokhin3, Raymond C Fort4, John Ralph3, Kenneth E Hammel5.   

Abstract

The white rot basidiomycete Ceriporiopsis subvermispora delignifies wood selectively and has potential biotechnological applications. Its ability to remove lignin before the substrate porosity has increased enough to admit enzymes suggests that small diffusible oxidants contribute to delignification. A key question is whether these unidentified oxidants attack lignin via single-electron transfer (SET), in which case they are expected to cleave its propyl side chains between Cα and Cβ and to oxidize the threo-diastereomer of its predominating β-O-4-linked structures more extensively than the corresponding erythro-diastereomer. We used two-dimensional solution-state nuclear magnetic resonance (NMR) techniques to look for changes in partially biodegraded lignin extracted from spruce wood after white rot caused by C. subvermispora. The results showed that (i) benzoic acid residues indicative of Cα-Cβ cleavage were the major identifiable truncated structures in lignin after decay and (ii) depletion of β-O-4-linked units was markedly diastereoselective with a threo preference. The less selective delignifier Phanerochaete chrysosporium also exhibited this diastereoselectivity on spruce, and a P. chrysosporium lignin peroxidase operating in conjunction with the P. chrysosporium metabolite veratryl alcohol did likewise when cleaving synthetic lignin in vitro. However, C. subvermispora was significantly more diastereoselective than P. chrysosporium or lignin peroxidase-veratryl alcohol. Our results show that the ligninolytic oxidants of C. subvermispora are collectively more diastereoselective than currently known fungal ligninolytic oxidants and suggest that SET oxidation is one of the chemical mechanisms involved.
Copyright © 2014, American Society for Microbiology. All Rights Reserved.

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Year:  2014        PMID: 25261514      PMCID: PMC4249248          DOI: 10.1128/AEM.02111-14

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  23 in total

1.  Comparison of the acetyl bromide spectrophotometric method with other analytical lignin methods for determining lignin concentration in forage samples.

Authors:  Romualdo S Fukushima; Ronald D Hatfield
Journal:  J Agric Food Chem       Date:  2004-06-16       Impact factor: 5.279

2.  Compensated adiabatic inversion pulses: broadband INEPT and HSQC.

Authors:  Eriks Kupce; Ray Freeman
Journal:  J Magn Reson       Date:  2007-05-17       Impact factor: 2.229

3.  Extracellular Enzyme Production and Synthetic Lignin Mineralization by Ceriporiopsis subvermispora.

Authors:  C Rüttimann-Johnson; L Salas; R Vicuña; T K Kirk
Journal:  Appl Environ Microbiol       Date:  1993-06       Impact factor: 4.792

4.  The benzaldehyde oxidation paradox explained by the interception of peroxy radical by benzyl alcohol.

Authors:  Meenakshisundaram Sankar; Ewa Nowicka; Emma Carter; Damien M Murphy; David W Knight; Donald Bethell; Graham J Hutchings
Journal:  Nat Commun       Date:  2014-02-25       Impact factor: 14.919

5.  Temporal alterations in the secretome of the selective ligninolytic fungus Ceriporiopsis subvermispora during growth on aspen wood reveal this organism's strategy for degrading lignocellulose.

Authors:  Chiaki Hori; Jill Gaskell; Kiyohiko Igarashi; Phil Kersten; Michael Mozuch; Masahiro Samejima; Dan Cullen
Journal:  Appl Environ Microbiol       Date:  2014-01-17       Impact factor: 4.792

6.  Coupling of manganese peroxidase-mediated lipid peroxidation with destruction of nonphenolic lignin model compounds and 14C-labeled lignins.

Authors:  A Kapich; M Hofrichter; T Vares; A Hatakka
Journal:  Biochem Biophys Res Commun       Date:  1999-05-27       Impact factor: 3.575

7.  Extracellular lipid peroxidation of selective white-rot fungus, Ceriporiopsis subvermispora.

Authors:  M Enoki; T Watanabe; S Nakagame; K Koller; K Messner; Y Honda; M Kuwahara
Journal:  FEMS Microbiol Lett       Date:  1999-11-15       Impact factor: 2.742

8.  Signatures of cinnamyl alcohol dehydrogenase deficiency in poplar lignins.

Authors:  Catherine Lapierre; Gilles Pilate; Brigitte Pollet; Isabelle Mila; Jean-Charles Leplé; Lise Jouanin; Hoon Kim; John Ralph
Journal:  Phytochemistry       Date:  2004-02       Impact factor: 4.072

9.  Oxidative degradation of non-phenolic lignin during lipid peroxidation by fungal manganese peroxidase.

Authors:  W Bao; Y Fukushima; K A Jensen; M A Moen; K E Hammel
Journal:  FEBS Lett       Date:  1994-11-14       Impact factor: 4.124

10.  Ligninolysis by a purified lignin peroxidase.

Authors:  K E Hammel; K A Jensen; M D Mozuch; L L Landucci; M Tien; E A Pease
Journal:  J Biol Chem       Date:  1993-06-15       Impact factor: 5.157

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  7 in total

1.  Reactivity of Waterlogged Archeological Elm Wood with Organosilicon Compounds Applied as Wood Consolidants: 2D 1H-13C Solution-State NMR Studies.

Authors:  Magdalena Broda; Daniel J Yelle
Journal:  Molecules       Date:  2022-05-25       Impact factor: 4.927

2.  NMR studies on lignocellulose deconstructions in the digestive system of the lower termite Coptotermes formosanus Shiraki.

Authors:  Didi Tarmadi; Yuki Tobimatsu; Masaomi Yamamura; Takuji Miyamoto; Yasuyuki Miyagawa; Toshiaki Umezawa; Tsuyoshi Yoshimura
Journal:  Sci Rep       Date:  2018-01-22       Impact factor: 4.379

3.  Enhanced delignification of steam-pretreated poplar by a bacterial laccase.

Authors:  Rahul Singh; Jinguang Hu; Matthew R Regner; James W Round; John Ralph; John N Saddler; Lindsay D Eltis
Journal:  Sci Rep       Date:  2017-02-07       Impact factor: 4.379

4.  Mechanistic insight in the selective delignification of wheat straw by three white-rot fungal species through quantitative 13C-IS py-GC-MS and whole cell wall HSQC NMR.

Authors:  Gijs van Erven; Nazri Nayan; Anton S M Sonnenberg; Wouter H Hendriks; John W Cone; Mirjam A Kabel
Journal:  Biotechnol Biofuels       Date:  2018-09-26       Impact factor: 6.040

5.  Acridine Orange Indicates Early Oxidation of Wood Cell Walls by Fungi.

Authors:  Carl J Houtman; Peter Kitin; Jon C D Houtman; Kenneth E Hammel; Christopher G Hunt
Journal:  PLoS One       Date:  2016-07-25       Impact factor: 3.240

6.  Structural Motifs of Wheat Straw Lignin Differ in Susceptibility to Degradation by the White-Rot Fungus Ceriporiopsis subvermispora.

Authors:  Gijs van Erven; Jianli Wang; Peicheng Sun; Pieter de Waard; Jacinta van der Putten; Guus E Frissen; Richard J A Gosselink; Grigory Zinovyev; Antje Potthast; Willem J H van Berkel; Mirjam A Kabel
Journal:  ACS Sustain Chem Eng       Date:  2019-11-05       Impact factor: 8.198

Review 7.  An Introduction to Model Compounds of Lignin Linking Motifs; Synthesis and Selection Considerations for Reactivity Studies.

Authors:  Ciaran W Lahive; Paul C J Kamer; Christopher S Lancefield; Peter J Deuss
Journal:  ChemSusChem       Date:  2020-07-09       Impact factor: 8.928

  7 in total

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