Literature DB >> 25261288

Aromatic aldehydes at the active site of aldehyde oxidoreductase from Desulfovibrio gigas: reactivity and molecular details of the enzyme-substrate and enzyme-product interaction.

Hugo D Correia1, Jacopo Marangon, Carlos D Brondino, Jose J G Moura, Maria J Romão, Pablo J González, Teresa Santos-Silva.   

Abstract

Desulfovibrio gigas aldehyde oxidoreductase (DgAOR) is a mononuclear molybdenum-containing enzyme from the xanthine oxidase (XO) family, a group of enzymes capable of catalyzing the oxidative hydroxylation of aldehydes and heterocyclic compounds. The kinetic studies reported in this work showed that DgAOR catalyzes the oxidative hydroxylation of aromatic aldehydes, but not heterocyclic compounds. NMR spectroscopy studies using (13)C-labeled benzaldehyde confirmed that DgAOR catalyzes the conversion of aldehydes to the respective carboxylic acids. Steady-state kinetics in solution showed that high concentrations of the aromatic aldehydes produce substrate inhibition and in the case of 3-phenyl propionaldehyde a suicide substrate behavior. Hydroxyl-substituted aromatic aldehydes present none of these behaviors but the kinetic parameters are largely affected by the position of the OH group. High-resolution crystallographic structures obtained from single crystals of active-DgAOR soaked with benzaldehyde showed that the side chains of Phe425 and Tyr535 are important for the stabilization of the substrate in the active site. On the other hand, the X-ray data of DgAOR soaked with trans-cinnamaldehyde showed a cinnamic acid molecule in the substrate channel. The X-ray data of DgAOR soaked with 3-phenyl propionaldehyde showed clearly how high substrate concentrations inactivate the enzyme by binding covalently at the surface of the enzyme and blocking the substrate channel. The different reactivity of DgAOR versus aldehyde oxidase and XO towards aromatic aldehydes and N-heterocyclic compounds is explained on the basis of the present kinetic and structural data.

Entities:  

Mesh:

Substances:

Year:  2014        PMID: 25261288     DOI: 10.1007/s00775-014-1196-4

Source DB:  PubMed          Journal:  J Biol Inorg Chem        ISSN: 0949-8257            Impact factor:   3.358


  24 in total

Review 1.  Molybdenum and tungsten enzymes: the xanthine oxidase family.

Authors:  Carlos D Brondino; Maria João Romão; Isabel Moura; José J G Moura
Journal:  Curr Opin Chem Biol       Date:  2006-02-15       Impact factor: 8.822

2.  Valence screening of water in protein crystals reveals potential Na+ binding sites.

Authors:  M Nayal; E Di Cera
Journal:  J Mol Biol       Date:  1996-02-23       Impact factor: 5.469

3.  iMOSFLM: a new graphical interface for diffraction-image processing with MOSFLM.

Authors:  T Geoff G Battye; Luke Kontogiannis; Owen Johnson; Harold R Powell; Andrew G W Leslie
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

4.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

5.  Crystal structure of the xanthine oxidase-related aldehyde oxido-reductase from D. gigas.

Authors:  M J Romão; M Archer; I Moura; J J Moura; J LeGall; R Engh; M Schneider; P Hof; R Huber
Journal:  Science       Date:  1995-11-17       Impact factor: 47.728

6.  Kinetic, structural, and EPR studies reveal that aldehyde oxidoreductase from Desulfovibrio gigas does not need a sulfido ligand for catalysis and give evidence for a direct Mo-C interaction in a biological system.

Authors:  Teresa Santos-Silva; Felix Ferroni; Anders Thapper; Jacopo Marangon; Pablo J González; Alberto C Rizzi; Isabel Moura; José J G Moura; Maria J Romão; Carlos D Brondino
Journal:  J Am Chem Soc       Date:  2009-06-17       Impact factor: 15.419

Review 7.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

8.  Kinetic and structural studies of aldehyde oxidoreductase from Desulfovibrio gigas reveal a dithiolene-based chemistry for enzyme activation and inhibition by H(2)O(2).

Authors:  Jacopo Marangon; Hugo D Correia; Carlos D Brondino; José J G Moura; Maria J Romão; Pablo J González; Teresa Santos-Silva
Journal:  PLoS One       Date:  2013-12-31       Impact factor: 3.240

9.  MolProbity: all-atom structure validation for macromolecular crystallography.

Authors:  Vincent B Chen; W Bryan Arendall; Jeffrey J Headd; Daniel A Keedy; Robert M Immormino; Gary J Kapral; Laura W Murray; Jane S Richardson; David C Richardson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

View more
  1 in total

1.  Archaeal Mo-Containing Glyceraldehyde Oxidoreductase Isozymes Exhibit Diverse Substrate Specificities through Unique Subunit Assemblies.

Authors:  Takayoshi Wakagi; Hiroshi Nishimasu; Masayuki Miyake; Shinya Fushinobu
Journal:  PLoS One       Date:  2016-01-25       Impact factor: 3.240

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.