Literature DB >> 25249879

Bis(2-amino-4-phenyl-1,3-thia-zol-3-ium) tetra-chlorido-palladate(II).

Reyna Reyes-Martínez1, Rubén M Carballo1, Gonzalo J Mena-Rejón1, Simón Hernández-Ortega2, David Cáceres-Castillo1.   

Abstract

The title compound, (C9H9N2S)2[PdCl4], consists of two monoprotonated 2-amino-4-phenyl-1,3-thia-zole molecules and one tetra-chlorido-palladate anion. The organic molecules exhibit a dihedral angle between the main rings planes of 31.82 (9)°. In the anion, the Pd(II) atom is located on a crystallographic centre of symmetry with a square-planar geometry. In the crystal, the anions and cations are connected through bifurcated N-H⋯Cl hydrogen bonds, and these inter-actions lead to hydrogen-bonded tapes of cations and anions along [100].

Entities:  

Keywords:  crystal structure

Year:  2014        PMID: 25249879      PMCID: PMC4158524          DOI: 10.1107/S1600536814015360

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the potential biological activity of compounds containing thia­zole rings, see: Annadurai et al. (2012 ▶); Alam et al. (2011 ▶). For the synthesis of thia­zole compounds, see: Cáceres-Castillo et al. (2012 ▶). For similar structures with protonated molecules, see: Form et al. (1974 ▶); Jin et al. (2011 ▶, 2013 ▶). For the crystal structure of non-protonated thia­zole, see: Au-Alvarez et al. (1999 ▶).

Experimental

Crystal data

(C9H9N2S)2[PdCl4] M = 602.68 Triclinic, a = 7.2880 (2) Å b = 8.9214 (3) Å c = 9.8192 (3) Å α = 66.258 (1)° β = 73.778 (1)° γ = 84.468 (1)° V = 561.04 (3) Å3 Z = 1 Mo Kα radiation μ = 1.50 mm−1 T = 298 K 0.46 × 0.28 × 0.21 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: analytical (SADABS; Bruker, 2012 ▶) T min = 0.658, T max = 0.842 4857 measured reflections 2060 independent reflections 1982 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.020 wR(F 2) = 0.051 S = 1.11 2060 reflections 143 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.26 e Å−3 Δρmin = −0.30 e Å−3 Data collection: APEX2 (Bruker, 2012 ▶); cell refinement: SAINT (Bruker, 2012 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536814015360/pj2013sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814015360/pj2013Isup2.hkl CCDC reference: 1011353 Additional supporting information: crystallographic information; 3D view; checkCIF report
(C9H9N2S)2[PdCl4]Z = 1
Mr = 602.68F(000) = 300
Triclinic, P1Dx = 1.784 Mg m3
a = 7.2880 (2) ÅMo Kα radiation, λ = 0.71073 Å
b = 8.9214 (3) ÅCell parameters from 4506 reflections
c = 9.8192 (3) Åθ = 2.4–25.4°
α = 66.258 (1)°µ = 1.50 mm1
β = 73.778 (1)°T = 298 K
γ = 84.468 (1)°Prism, brown
V = 561.04 (3) Å30.46 × 0.28 × 0.21 mm
Bruker APEXII CCD area-detector diffractometer1982 reflections with I > 2σ(I)
Detector resolution: 0.83 pixels mm-1Rint = 0.026
ω scansθmax = 25.4°, θmin = 2.4°
Absorption correction: analytical (SADABS; Bruker, 2012)h = −8→8
Tmin = 0.658, Tmax = 0.842k = −10→10
4857 measured reflectionsl = −11→11
2060 independent reflections
Refinement on F2Hydrogen site location: mixed
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.020w = 1/[σ2(Fo2) + (0.027P)2 + 0.0969P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.051(Δ/σ)max < 0.001
S = 1.11Δρmax = 0.26 e Å3
2060 reflectionsΔρmin = −0.30 e Å3
143 parametersExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
3 restraintsExtinction coefficient: 0.015 (2)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
Pd0.50000.00001.00000.03103 (10)
Cl10.54163 (7)0.23160 (6)0.77534 (6)0.04971 (15)
Cl20.78000 (7)−0.10267 (6)0.89335 (6)0.04577 (14)
N10.9774 (2)0.2276 (2)0.56952 (19)0.0382 (4)
H10.8651 (19)0.185 (3)0.628 (2)0.046*
C21.1103 (3)0.2483 (2)0.6301 (2)0.0380 (4)
N21.0983 (3)0.1821 (2)0.7791 (2)0.0527 (5)
H2A1.203 (2)0.195 (3)0.804 (3)0.063*
H2B1.001 (3)0.112 (3)0.837 (3)0.063*
S31.29130 (7)0.37696 (7)0.49056 (6)0.04726 (15)
C41.1739 (3)0.4022 (3)0.3520 (2)0.0459 (5)
H41.21960.46900.24810.055*
C51.0096 (3)0.3149 (2)0.4107 (2)0.0365 (4)
C60.8732 (3)0.3009 (2)0.3309 (2)0.0374 (4)
C70.8497 (3)0.4318 (3)0.2005 (2)0.0484 (5)
H70.91750.52910.16600.058*
C80.7259 (4)0.4194 (3)0.1206 (3)0.0572 (6)
H80.70960.50870.03400.069*
C90.6278 (4)0.2758 (3)0.1694 (3)0.0585 (6)
H90.54740.26660.11430.070*
C100.6482 (3)0.1453 (3)0.2995 (3)0.0576 (6)
H100.58000.04840.33280.069*
C110.7696 (3)0.1563 (3)0.3820 (3)0.0475 (5)
H110.78150.06780.47070.057*
U11U22U33U12U13U23
Pd0.02640 (13)0.03439 (14)0.03019 (13)−0.00791 (8)−0.00582 (8)−0.00981 (9)
Cl10.0358 (3)0.0484 (3)0.0431 (3)−0.0070 (2)−0.0057 (2)0.0025 (2)
Cl20.0345 (3)0.0472 (3)0.0495 (3)−0.0033 (2)−0.0015 (2)−0.0183 (2)
N10.0298 (8)0.0420 (9)0.0380 (9)−0.0078 (7)−0.0058 (7)−0.0112 (7)
C20.0326 (9)0.0374 (10)0.0416 (11)−0.0027 (8)−0.0092 (8)−0.0129 (8)
N20.0494 (11)0.0594 (12)0.0434 (10)−0.0154 (9)−0.0169 (9)−0.0074 (9)
S30.0326 (3)0.0601 (3)0.0447 (3)−0.0143 (2)−0.0069 (2)−0.0151 (2)
C40.0387 (11)0.0584 (13)0.0365 (10)−0.0118 (9)−0.0051 (9)−0.0147 (9)
C50.0321 (9)0.0394 (10)0.0376 (10)−0.0008 (8)−0.0062 (8)−0.0164 (8)
C60.0329 (9)0.0436 (10)0.0393 (10)0.0001 (8)−0.0064 (8)−0.0217 (9)
C70.0532 (13)0.0504 (12)0.0449 (12)−0.0054 (10)−0.0144 (10)−0.0197 (10)
C80.0645 (15)0.0669 (15)0.0498 (13)0.0047 (12)−0.0254 (12)−0.0265 (12)
C90.0519 (14)0.0780 (17)0.0680 (16)0.0034 (12)−0.0260 (12)−0.0449 (14)
C100.0501 (13)0.0593 (14)0.0773 (17)−0.0071 (11)−0.0169 (12)−0.0389 (13)
C110.0427 (11)0.0453 (11)0.0573 (13)−0.0019 (9)−0.0134 (10)−0.0223 (10)
Pd—Cl12.3031 (5)C4—H40.9300
Pd—Cl1i2.3031 (5)C5—C61.468 (3)
Pd—Cl2i2.3061 (5)C6—C71.383 (3)
Pd—Cl22.3061 (5)C6—C111.393 (3)
N1—C21.331 (2)C7—C81.388 (3)
N1—C51.395 (3)C7—H70.9300
N1—H10.876 (10)C8—C91.369 (4)
C2—N21.319 (3)C8—H80.9300
C2—S31.7179 (19)C9—C101.373 (4)
N2—H2A0.894 (10)C9—H90.9300
N2—H2B0.887 (10)C10—C111.389 (3)
S3—C41.733 (2)C10—H100.9300
C4—C51.343 (3)C11—H110.9300
Cl1—Pd—Cl1i180.0C4—C5—C6129.09 (18)
Cl1—Pd—Cl2i90.134 (19)N1—C5—C6120.10 (17)
Cl1i—Pd—Cl2i89.866 (19)C7—C6—C11119.06 (19)
Cl1—Pd—Cl289.866 (19)C7—C6—C5119.70 (18)
Cl1i—Pd—Cl290.134 (19)C11—C6—C5121.22 (19)
Cl2i—Pd—Cl2180.00 (2)C6—C7—C8120.7 (2)
C2—N1—C5115.25 (16)C6—C7—H7119.7
C2—N1—H1120.8 (15)C8—C7—H7119.7
C5—N1—H1121.9 (15)C9—C8—C7120.0 (2)
N2—C2—N1123.49 (18)C9—C8—H8120.0
N2—C2—S3125.28 (16)C7—C8—H8120.0
N1—C2—S3111.19 (14)C8—C9—C10120.0 (2)
C2—N2—H2A114.7 (17)C8—C9—H9120.0
C2—N2—H2B115.3 (18)C10—C9—H9120.0
H2A—N2—H2B128 (2)C9—C10—C11120.7 (2)
C2—S3—C490.03 (10)C9—C10—H10119.6
C5—C4—S3112.71 (16)C11—C10—H10119.6
C5—C4—H4123.6C10—C11—C6119.5 (2)
S3—C4—H4123.6C10—C11—H11120.2
C4—C5—N1110.80 (17)C6—C11—H11120.2
D—H···AD—HH···AD···AD—H···A
N2—H2B···Cl20.89 (1)2.41 (2)3.237 (2)155 (2)
N2—H2A···Cl2ii0.89 (1)2.78 (2)3.3572 (19)123 (2)
N2—H2A···Cl1iii0.89 (1)2.44 (1)3.291 (2)159 (2)
N1—H1···Cl20.88 (1)2.79 (2)3.4028 (17)129 (2)
N1—H1···Cl10.88 (1)2.49 (2)3.2593 (17)147 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N2—H2B⋯Cl20.89 (1)2.41 (2)3.237 (2)155 (2)
N2—H2A⋯Cl2i 0.89 (1)2.78 (2)3.3572 (19)123 (2)
N2—H2A⋯Cl1ii 0.89 (1)2.44 (1)3.291 (2)159 (2)
N1—H1⋯Cl20.88 (1)2.79 (2)3.4028 (17)129 (2)
N1—H1⋯Cl10.88 (1)2.49 (2)3.2593 (17)147 (2)

Symmetry codes: (i) ; (ii) .

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