| Literature DB >> 25249876 |
Hadariah Bahron1, Amalina Mohd Tajuddin2, Wan Nazihah Wan Ibrahim1, Suchada Chantrapromma3, Hoong-Kun Fun4.
Abstract
In the title complex, [Pd(C16H16NO2)2]·Entities:
Keywords: crystal structure
Year: 2014 PMID: 25249876 PMCID: PMC4158526 DOI: 10.1107/S1600536814015025
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Pd(C16H16NO)2]·CHCl3 | |
| Monoclinic, | Melting point = 509–511 K |
| Hall symbol: -C 2yc | Mo |
| Cell parameters from 5542 reflections | |
| θ = 1.8–32.5° | |
| µ = 0.91 mm−1 | |
| β = 134.885 (1)° | |
| Block, orange | |
| 0.48 × 0.25 × 0.18 mm |
| Bruker APEXII CCD area-detector diffractometer | 5542 independent reflections |
| Radiation source: sealed tube | 5006 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 32.5°, θmin = 1.8° |
| Absorption correction: multi-scan ( | |
| 43800 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 5542 reflections | (Δ/σ)max = 0.001 |
| 204 parameters | Δρmax = 1.24 e Å−3 |
| 0 restraints | Δρmin = −1.90 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| Pd1 | 0.2500 | 0.7500 | 0.5000 | 0.01355 (4) | |
| O1 | 0.27424 (5) | 0.77360 (19) | 0.44058 (7) | 0.0199 (2) | |
| O2 | 0.29036 (5) | 0.7333 (2) | 0.34385 (7) | 0.0216 (2) | |
| N1 | 0.29650 (5) | 1.0260 (2) | 0.56892 (7) | 0.0161 (2) | |
| C1 | 0.30562 (6) | 0.9327 (2) | 0.44764 (8) | 0.0163 (2) | |
| C2 | 0.31517 (6) | 0.9175 (3) | 0.39460 (9) | 0.0182 (2) | |
| C3 | 0.34628 (7) | 1.0811 (3) | 0.39600 (9) | 0.0230 (3) | |
| H3A | 0.3517 | 1.0693 | 0.3607 | 0.028* | |
| C4 | 0.36987 (8) | 1.2650 (3) | 0.44999 (10) | 0.0256 (3) | |
| H4A | 0.3909 | 1.3743 | 0.4505 | 0.031* | |
| C5 | 0.36196 (7) | 1.2838 (3) | 0.50202 (10) | 0.0229 (3) | |
| H5A | 0.3777 | 1.4061 | 0.5378 | 0.028* | |
| C6 | 0.32999 (6) | 1.1187 (2) | 0.50177 (8) | 0.0172 (2) | |
| C7 | 0.32398 (6) | 1.1514 (2) | 0.55844 (9) | 0.0176 (2) | |
| H7A | 0.3421 | 1.2786 | 0.5918 | 0.021* | |
| C8 | 0.30159 (6) | 1.0981 (3) | 0.63693 (9) | 0.0180 (2) | |
| H8A | 0.2676 | 1.0451 | 0.6249 | 0.022* | |
| H8B | 0.3020 | 1.2605 | 0.6393 | 0.022* | |
| C9 | 0.35728 (6) | 1.0068 (2) | 0.72040 (9) | 0.0169 (2) | |
| C10 | 0.40868 (7) | 1.1352 (3) | 0.77237 (9) | 0.0215 (3) | |
| H10A | 0.4083 | 1.2778 | 0.7555 | 0.026* | |
| C11 | 0.46054 (7) | 1.0533 (3) | 0.84920 (10) | 0.0245 (3) | |
| H11A | 0.4943 | 1.1418 | 0.8829 | 0.029* | |
| C12 | 0.46238 (7) | 0.8403 (3) | 0.87610 (9) | 0.0220 (3) | |
| C13 | 0.41100 (7) | 0.7121 (3) | 0.82397 (10) | 0.0213 (3) | |
| H13A | 0.4114 | 0.5695 | 0.8409 | 0.026* | |
| C14 | 0.35894 (7) | 0.7929 (3) | 0.74686 (9) | 0.0197 (3) | |
| H14A | 0.3253 | 0.7038 | 0.7130 | 0.024* | |
| C15 | 0.30447 (7) | 0.6982 (3) | 0.29710 (10) | 0.0257 (3) | |
| H15A | 0.2903 | 0.5538 | 0.2708 | 0.039* | |
| H15B | 0.3465 | 0.7047 | 0.3339 | 0.039* | |
| H15C | 0.2861 | 0.8125 | 0.2552 | 0.039* | |
| C16 | 0.51830 (8) | 0.7502 (3) | 0.95912 (11) | 0.0325 (4) | |
| H16A | 0.5514 | 0.7914 | 0.9680 | 0.049* | |
| H16B | 0.5160 | 0.5899 | 0.9593 | 0.049* | |
| H16C | 0.5232 | 0.8119 | 1.0029 | 0.049* | |
| C17 | 0.00983 (14) | 0.8371 (6) | 0.2433 (2) | 0.0230 (6) | 0.50 |
| H17A | 0.0259 | 0.8362 | 0.2200 | 0.028* | 0.50 |
| Cl1 | 0.0000 | 1.12294 (11) | 0.2500 | 0.04186 (16) | |
| Cl2 | 0.05936 (2) | 0.70272 (10) | 0.33308 (4) | 0.04878 (16) |
| Pd1 | 0.01277 (6) | 0.01580 (7) | 0.01323 (7) | −0.00043 (4) | 0.00959 (6) | −0.00051 (4) |
| O1 | 0.0230 (5) | 0.0231 (5) | 0.0223 (5) | −0.0064 (4) | 0.0191 (5) | −0.0050 (4) |
| O2 | 0.0230 (5) | 0.0280 (6) | 0.0217 (5) | −0.0055 (4) | 0.0185 (5) | −0.0047 (4) |
| N1 | 0.0145 (5) | 0.0181 (5) | 0.0143 (5) | 0.0009 (4) | 0.0097 (4) | −0.0003 (4) |
| C1 | 0.0133 (5) | 0.0203 (6) | 0.0138 (5) | 0.0002 (4) | 0.0090 (5) | 0.0020 (4) |
| C2 | 0.0144 (5) | 0.0243 (7) | 0.0141 (5) | −0.0012 (5) | 0.0095 (5) | 0.0014 (5) |
| C3 | 0.0205 (6) | 0.0314 (8) | 0.0182 (6) | −0.0042 (6) | 0.0141 (6) | 0.0022 (6) |
| C4 | 0.0247 (7) | 0.0297 (8) | 0.0210 (7) | −0.0081 (6) | 0.0156 (6) | 0.0016 (6) |
| C5 | 0.0213 (7) | 0.0251 (7) | 0.0179 (6) | −0.0064 (5) | 0.0122 (6) | −0.0005 (5) |
| C6 | 0.0144 (5) | 0.0200 (6) | 0.0132 (5) | −0.0006 (5) | 0.0083 (5) | 0.0019 (5) |
| C7 | 0.0152 (5) | 0.0179 (6) | 0.0147 (5) | −0.0001 (5) | 0.0088 (5) | 0.0001 (4) |
| C8 | 0.0182 (6) | 0.0192 (6) | 0.0181 (6) | 0.0007 (5) | 0.0134 (5) | −0.0023 (5) |
| C9 | 0.0177 (6) | 0.0191 (6) | 0.0159 (5) | −0.0001 (5) | 0.0126 (5) | −0.0029 (5) |
| C10 | 0.0219 (6) | 0.0203 (6) | 0.0191 (6) | −0.0032 (5) | 0.0134 (6) | −0.0033 (5) |
| C11 | 0.0206 (6) | 0.0264 (7) | 0.0186 (6) | −0.0046 (6) | 0.0111 (6) | −0.0043 (5) |
| C12 | 0.0207 (6) | 0.0271 (7) | 0.0173 (6) | 0.0025 (5) | 0.0131 (6) | −0.0005 (5) |
| C13 | 0.0235 (7) | 0.0220 (6) | 0.0213 (6) | 0.0017 (5) | 0.0168 (6) | 0.0008 (5) |
| C14 | 0.0197 (6) | 0.0223 (6) | 0.0192 (6) | −0.0014 (5) | 0.0145 (6) | −0.0016 (5) |
| C15 | 0.0249 (7) | 0.0374 (9) | 0.0234 (7) | −0.0029 (6) | 0.0202 (6) | −0.0036 (6) |
| C16 | 0.0251 (8) | 0.0385 (10) | 0.0215 (7) | 0.0054 (7) | 0.0120 (7) | 0.0050 (7) |
| C17 | 0.0241 (14) | 0.0232 (14) | 0.0245 (14) | −0.0037 (11) | 0.0181 (12) | −0.0041 (11) |
| Cl1 | 0.0565 (4) | 0.0199 (3) | 0.0593 (5) | 0.000 | 0.0445 (4) | 0.000 |
| Cl2 | 0.0256 (2) | 0.0353 (2) | 0.0438 (3) | 0.00892 (18) | 0.0097 (2) | −0.0081 (2) |
| Pd1—O1i | 1.9741 (10) | C9—C14 | 1.395 (2) |
| Pd1—O1 | 1.9741 (10) | C10—C11 | 1.393 (2) |
| Pd1—N1 | 2.0204 (12) | C10—H10A | 0.9300 |
| Pd1—N1i | 2.0204 (12) | C11—C12 | 1.392 (2) |
| O1—C1 | 1.3069 (17) | C11—H11A | 0.9300 |
| O2—C2 | 1.3672 (19) | C12—C13 | 1.393 (2) |
| O2—C15 | 1.4279 (18) | C12—C16 | 1.508 (2) |
| N1—C7 | 1.2971 (19) | C13—C14 | 1.396 (2) |
| N1—C8 | 1.4911 (18) | C13—H13A | 0.9300 |
| C1—C6 | 1.411 (2) | C14—H14A | 0.9300 |
| C1—C2 | 1.4344 (19) | C15—H15A | 0.9600 |
| C2—C3 | 1.378 (2) | C15—H15B | 0.9600 |
| C3—C4 | 1.401 (2) | C15—H15C | 0.9600 |
| C3—H3A | 0.9300 | C16—H16A | 0.9600 |
| C4—C5 | 1.372 (2) | C16—H16B | 0.9600 |
| C4—H4A | 0.9300 | C16—H16C | 0.9600 |
| C5—C6 | 1.417 (2) | C17—C17ii | 0.871 (6) |
| C5—H5A | 0.9300 | C17—Cl2 | 1.654 (3) |
| C6—C7 | 1.437 (2) | C17—Cl1 | 1.760 (3) |
| C7—H7A | 0.9300 | C17—Cl2ii | 1.769 (3) |
| C8—C9 | 1.512 (2) | C17—H17A | 0.9604 |
| C8—H8A | 0.9700 | Cl1—C17ii | 1.760 (3) |
| C8—H8B | 0.9700 | Cl2—C17ii | 1.769 (3) |
| C9—C10 | 1.394 (2) | ||
| O1i—Pd1—O1 | 180.000 (1) | C10—C9—C8 | 120.25 (14) |
| O1i—Pd1—N1 | 87.83 (5) | C14—C9—C8 | 121.32 (13) |
| O1—Pd1—N1 | 92.17 (5) | C11—C10—C9 | 121.09 (15) |
| O1i—Pd1—N1i | 92.17 (5) | C11—C10—H10A | 119.5 |
| O1—Pd1—N1i | 87.83 (5) | C9—C10—H10A | 119.5 |
| N1—Pd1—N1i | 180.0 | C12—C11—C10 | 120.73 (15) |
| C1—O1—Pd1 | 127.25 (9) | C12—C11—H11A | 119.6 |
| C2—O2—C15 | 116.10 (12) | C10—C11—H11A | 119.6 |
| C7—N1—C8 | 115.30 (12) | C11—C12—C13 | 118.08 (14) |
| C7—N1—Pd1 | 123.66 (10) | C11—C12—C16 | 121.11 (16) |
| C8—N1—Pd1 | 121.04 (9) | C13—C12—C16 | 120.82 (16) |
| O1—C1—C6 | 125.72 (13) | C12—C13—C14 | 121.50 (15) |
| O1—C1—C2 | 116.75 (13) | C12—C13—H13A | 119.2 |
| C6—C1—C2 | 117.52 (13) | C14—C13—H13A | 119.2 |
| O2—C2—C3 | 124.80 (13) | C9—C14—C13 | 120.18 (14) |
| O2—C2—C1 | 114.39 (12) | C9—C14—H14A | 119.9 |
| C3—C2—C1 | 120.81 (14) | C13—C14—H14A | 119.9 |
| C2—C3—C4 | 120.72 (14) | O2—C15—H15A | 109.5 |
| C2—C3—H3A | 119.6 | O2—C15—H15B | 109.5 |
| C4—C3—H3A | 119.6 | H15A—C15—H15B | 109.5 |
| C5—C4—C3 | 119.97 (15) | O2—C15—H15C | 109.5 |
| C5—C4—H4A | 120.0 | H15A—C15—H15C | 109.5 |
| C3—C4—H4A | 120.0 | H15B—C15—H15C | 109.5 |
| C4—C5—C6 | 120.60 (15) | C12—C16—H16A | 109.5 |
| C4—C5—H5A | 119.7 | C12—C16—H16B | 109.5 |
| C6—C5—H5A | 119.7 | H16A—C16—H16B | 109.5 |
| C1—C6—C5 | 120.37 (13) | C12—C16—H16C | 109.5 |
| C1—C6—C7 | 122.75 (13) | H16A—C16—H16C | 109.5 |
| C5—C6—C7 | 116.89 (14) | H16B—C16—H16C | 109.5 |
| N1—C7—C6 | 128.23 (14) | C17ii—C17—Cl2 | 82.7 (4) |
| N1—C7—H7A | 115.9 | C17ii—C17—Cl1 | 75.67 (10) |
| C6—C7—H7A | 115.9 | Cl2—C17—Cl1 | 115.99 (18) |
| N1—C8—C9 | 111.02 (11) | C17ii—C17—Cl2ii | 68.1 (4) |
| N1—C8—H8A | 109.4 | Cl2—C17—Cl2ii | 115.65 (19) |
| C9—C8—H8A | 109.4 | Cl1—C17—Cl2ii | 110.29 (18) |
| N1—C8—H8B | 109.4 | C17ii—C17—H17A | 171.5 |
| C9—C8—H8B | 109.4 | Cl2—C17—H17A | 104.5 |
| H8A—C8—H8B | 108.0 | Cl1—C17—H17A | 104.5 |
| C10—C9—C14 | 118.42 (14) | Cl2ii—C17—H17A | 104.4 |
| N1—Pd1—O1—C1 | −4.24 (13) | C4—C5—C6—C7 | 179.83 (15) |
| N1i—Pd1—O1—C1 | 175.76 (13) | C8—N1—C7—C6 | 176.22 (13) |
| O1i—Pd1—N1—C7 | −175.14 (12) | Pd1—N1—C7—C6 | −3.4 (2) |
| O1—Pd1—N1—C7 | 4.86 (12) | C1—C6—C7—N1 | −0.7 (2) |
| O1i—Pd1—N1—C8 | 5.26 (10) | C5—C6—C7—N1 | 179.23 (15) |
| O1—Pd1—N1—C8 | −174.74 (10) | C7—N1—C8—C9 | −85.20 (15) |
| Pd1—O1—C1—C6 | 1.8 (2) | Pd1—N1—C8—C9 | 94.43 (13) |
| Pd1—O1—C1—C2 | −177.17 (10) | N1—C8—C9—C10 | 93.72 (16) |
| C15—O2—C2—C3 | 7.9 (2) | N1—C8—C9—C14 | −85.35 (16) |
| C15—O2—C2—C1 | −173.07 (13) | C14—C9—C10—C11 | −0.4 (2) |
| O1—C1—C2—O2 | −0.92 (19) | C8—C9—C10—C11 | −179.47 (14) |
| C6—C1—C2—O2 | 180.00 (12) | C9—C10—C11—C12 | 0.1 (2) |
| O1—C1—C2—C3 | 178.12 (14) | C10—C11—C12—C13 | 0.1 (2) |
| C6—C1—C2—C3 | −1.0 (2) | C10—C11—C12—C16 | 179.97 (16) |
| O2—C2—C3—C4 | 179.63 (15) | C11—C12—C13—C14 | 0.0 (2) |
| C1—C2—C3—C4 | 0.7 (2) | C16—C12—C13—C14 | −179.83 (15) |
| C2—C3—C4—C5 | −0.2 (3) | C10—C9—C14—C13 | 0.5 (2) |
| C3—C4—C5—C6 | −0.1 (3) | C8—C9—C14—C13 | 179.60 (13) |
| O1—C1—C6—C5 | −178.26 (14) | C12—C13—C14—C9 | −0.3 (2) |
| C2—C1—C6—C5 | 0.7 (2) | Cl2—C17—Cl1—C17ii | −74.3 (4) |
| O1—C1—C6—C7 | 1.7 (2) | Cl2ii—C17—Cl1—C17ii | 59.6 (4) |
| C2—C1—C6—C7 | −179.34 (13) | Cl1—C17—Cl2—C17ii | 70.1 (2) |
| C4—C5—C6—C1 | −0.2 (2) | Cl2ii—C17—Cl2—C17ii | −61.4 (3) |
| H··· | ||||
| C8—H8 | 0.97 | 2.19 | 2.806 (2) | 120 |
| C14—H14 | 0.93 | 2.57 | 3.284 (2) | 134 |
| C17—H17 | 0.96 | 2.83 | 3.648 (5) | 144 |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of the C9–C14 ring.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C8—H8 | 0.97 | 2.19 | 2.806 (2) | 120 |
| C14—H14 | 0.93 | 2.57 | 3.284 (2) | 134 |
| C17—H17 | 0.96 | 2.83 | 3.648 (5) | 144 |
Symmetry code: (i) .