Literature DB >> 25240398

Conformational dynamics and aggregation behavior of piezoelectric diphenylalanine peptides in an external electric field.

Catherine M Kelly1, Thomas Northey1, Kate Ryan2, Bernard R Brooks3, Andrei L Kholkin4, Brian J Rodriguez2, Nicolae-Viorel Buchete5.   

Abstract

Aromatic peptides including diphenylalanine (FF) have the capacity to self-assemble into ordered, biocompatible nanostructures with piezoelectric properties relevant to a variety of biomedical applications. Electric fields are commonly applied to align FF nanotubes, yet little is known about the effect of the electric field on the assembly process. Using all-atom molecular dynamics with explicit water molecules, we examine the response of FF monomers to the application of a constant external electric field over a range of intensities. We probe the aggregation mechanism of FF peptides, and find that the presence of even relatively weak fields can accelerate ordered aggregation, primarily by facilitating the alignment of individual molecular dipole moments. This is modulated by the conformational response of individual FF peptides (e.g., backbone stretching) and by the cooperative alignment of neighboring FF and water molecules. These observations may facilitate future studies on the controlled formation of nanostructured aggregates of piezoelectric peptides and the understanding of their electro-mechanical properties.
Copyright © 2014 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Atomistic molecular dynamics; Diphenylalanine peptide; External electric field; Peptide aggregate; Peptide–peptide interaction; Piezoelectric peptide

Mesh:

Substances:

Year:  2014        PMID: 25240398      PMCID: PMC4253857          DOI: 10.1016/j.bpc.2014.08.009

Source DB:  PubMed          Journal:  Biophys Chem        ISSN: 0301-4622            Impact factor:   2.352


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