Literature DB >> 25240290

Planifilum caeni sp. nov., a novel member of thermoactinomycete isolated from sludge compost.

Zhen Yu1, Chu Wu, Gui-Qin Yang, Shun-Gui Zhou.   

Abstract

A Gram positive, thermophilic, and filamentous bacterium, designated strain GIESS004(T), was isolated from a sludge compost from Guangzhou, China. Growth occurred at 45-55 °C (optimum 50-53 °C) and pH 6.0-10.0 (optimum pH 7.0-7.5). The organism formed cream-yellow colonies with radial wrinkles. Aerial mycelium was not produced in any of the growth media tested. Single spores were produced along the substrate hyphae. Strain GIESS004(T) contained MK-7 as the predominant menaquinone and iso-C(16:0), iso-C(15:0) and iso-C(17:0) as the major cellular fatty acids. The cell wall contained meso-diaminopimelic acid. The DNA G+C content was 60.7 mol%. Phylogenetic analyses based on 16S rRNA gene sequences indicated that strain GIESS004(T) was associated with the genus Planifilum and formed a cluster with its closest relative of Planifilum composti P8(T) (99.5 % similarity). However, the DNA-DNA pairing study showed that the isolate displayed reassociation value of only 57.6 ± 2.3 % with P. composti P8(T). On the basis of the polyphasic taxonomic results, strain GIESS004(T) (= CCTCC AB2013107(T) = MCCC 1K00414(T)) is designated as the type strain of a novel species of the genus Planifilum, for which the name Planifilum caeni sp. nov. is proposed.

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Year:  2014        PMID: 25240290     DOI: 10.1007/s00284-014-0693-6

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  14 in total

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Journal:  J Bacteriol       Date:  1991-01       Impact factor: 3.490

2.  Zhihengliuella alba sp. nov., and emended description of the genus Zhihengliuella.

Authors:  Shu-Kun Tang; Yun Wang; Yun Chen; Kai Lou; Lan-Lan Cao; Li-Hua Xu; Wen-Jun Li
Journal:  Int J Syst Evol Microbiol       Date:  2009-06-30       Impact factor: 2.747

3.  Novel mode of microbial energy metabolism: organic carbon oxidation coupled to dissimilatory reduction of iron or manganese.

Authors:  D R Lovley; E J Phillips
Journal:  Appl Environ Microbiol       Date:  1988-06       Impact factor: 4.792

4.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

5.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.

Authors:  J D Thompson; T J Gibson; F Plewniak; F Jeanmougin; D G Higgins
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

6.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

7.  Fe(III) oxide reduction and carbon tetrachloride dechlorination by a newly isolated Klebsiella pneumoniae strain L17.

Authors:  X M Li; S G Zhou; F B Li; C Y Wu; L Zhuang; W Xu; L Liu
Journal:  J Appl Microbiol       Date:  2008-11-29       Impact factor: 3.772

8.  Planifilum yunnanense sp. nov., a thermophilic thermoactinomycete isolated from a hot spring.

Authors:  Yan-Xin Zhang; Chen Dong; Shen Biao
Journal:  Int J Syst Evol Microbiol       Date:  2007-08       Impact factor: 2.747

9.  Bacillus korlensis sp. nov., a moderately halotolerant bacterium isolated from a sand soil sample in China.

Authors:  Lei Zhang; Yang Wang; Jun Dai; Yali Tang; Qiao Yang; Xuesong Luo; Chengxiang Fang
Journal:  Int J Syst Evol Microbiol       Date:  2009-06-19       Impact factor: 2.747

10.  Planifilum composti sp. nov., a thermophile isolated from compost.

Authors:  Song-Ih Han; Jae-Chan Lee; Hyo-Jin Lee; Kyung-Sook Whang
Journal:  Int J Syst Evol Microbiol       Date:  2013-08-02       Impact factor: 2.747

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