Literature DB >> 25240147

The crystal structure of sulfamethoxazole, interaction with DNA, DFT calculation, and molecular docking studies.

Dipankar Das1, Nilima Sahu1, Suman Roy1, Paramita Dutta1, Sudipa Mondal1, Elena L Torres2, Chittaranjan Sinha3.   

Abstract

Sulfamethoxazole (SMX) [4-amino-N-(5-methyl-1,2-oxazol-3-yl)benzenesulfonamide] is structurally established by single crystal X-ray diffraction measurement. The crystal packing shows H-bonded 2D polymer through N(7)-H(7A)-O(2), N(7)-H(7B)-O(3), N(1)-H(1)-N(2), C(5)-H(5)-O(3)-S(1) and N(7)-(H7A)-O(2)-S(1). Density Functional Theory (DFT) and Time Dependent-DFT (TD-DFT) computations of optimized structure of SMX determine the electronic structure and has explained the electronic spectral transitions. The interaction of SMX with CT-DNA has been studied by absorption spectroscopy and the binding constant (Kb) is 4.37×10(4)M(-1). The in silico test of SMX with DHPS from Escherichia coli and Streptococcus pneumoniae helps to understand drug metabolism and accounts the drug-molecule interactions. The molecular docking of SMX-DNA also helps to predict the interaction feature.
Copyright © 2014 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  DFT and TD-DFT computation; DNA interaction; Docking studies; Sulfamethoxazole; X-ray structure

Mesh:

Substances:

Year:  2014        PMID: 25240147     DOI: 10.1016/j.saa.2014.08.034

Source DB:  PubMed          Journal:  Spectrochim Acta A Mol Biomol Spectrosc        ISSN: 1386-1425            Impact factor:   4.098


  4 in total

1.  Antibacterial activities of sulfamethoxazolyl-azo-phenols and their Cu(II) complexes along with molecular docking properties.

Authors:  Nilima Sahu; Sudipa Mondal; Nayim Sepay; Suvroma Gupta; Elena Torres-Lopez; Shinnosuke Tanaka; Takashiro Akitsu; Chittaranjan Sinha
Journal:  J Biol Inorg Chem       Date:  2017-04-28       Impact factor: 3.358

2.  Theoretical analysis of the effects of counterions on the supramolecular arrangement of sulfamethoxazole.

Authors:  Álice C B Morais; Igor D Borges; João P M Rodrigues; Antônio S N Aguiar; Lucas D Dias; Ademir J Camargo; José L R Martins; Solemar S Oliveira; Hamilton B Napolitano
Journal:  J Mol Model       Date:  2022-10-01       Impact factor: 2.172

3.  Transport of Carbamazepine, Ciprofloxacin and Sulfamethoxazole in Activated Carbon: Solubility and Relationships between Structure and Diffusional Parameters.

Authors:  Mohamed Bizi; Fatima-Ezzahra El Bachra
Journal:  Molecules       Date:  2021-12-02       Impact factor: 4.411

4.  Crystal polymorphism and spectroscopical properties of sulfonamides in solid state by means of First Principles calculations.

Authors:  C Ignacio Sainz-Díaz; Alexander Pérez de la Luz; Carolina Barrientos-Salcedo; Misaela Francisco-Márquez; Catalina Soriano-Correa
Journal:  J Comput Aided Mol Des       Date:  2022-07-26       Impact factor: 4.179

  4 in total

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