Literature DB >> 25232592

Limits and phylogenetic relationships of East Asian fishes in the subfamily Oxygastrinae (Teleostei: Cypriniformes: Cyprinidae).

Kevin L Tang, Mary K Agnew, M Vincent Hirt, Daniel N Lumbantobing, Tetsuya Sado, View-Hune Teoh, Lei Yang, Henry L Bart, Phillip M Harris, Shunping He, Masaki Miya, Kenji Saitoh, Andrew M Simons, Robert M Wood, Richard L Mayden.   

Abstract

The cyprinid subfamily Oxygastrinae is composed of a diverse group of fishes that has been taxonomically and phylogenetically problematic. Their great variation in appearance, life histories, and trophic diversity resulted in uncertainty regarding their relationships, which led to their historical classification across many disparate subfamilies. The phylogenetic relationships of Oxygastrinae are resolved based on sequence data from four loci: cytochrome b, cytochrome c oxidase I, opsin, and recombination activating gene 1. A combined data matrix consisting of 4114 bp for 144 taxa was compiled and analyzed using maximum likelihood and parsimony optimality criteria. The subfamily Oxygastrinae is recovered as a monophyletic group that includes Ancherythroculter, Aphyocypris, Candidia, Chanodichthys, Ctenopharyngodon, Culter, Distoechodon, Elopichthys, Hainania, Hemiculter, Hemiculterella, Hemigrammocypris, Hypophthalmichthys, Ischikauia, Macrochirichthys, Megalobrama, Metzia, Mylopharyngodon, Nicholsicypris, Nipponocypris, Ochetobius, Opsariichthys, Oxygaster, Parabramis, Parachela, Paralaubuca, Pararasbora, Parazacco, Plagiognathops, Pseudobrama, Pseudohemiculter, Pseudolaubuca, Sinibrama, Squaliobarbus, Toxabramis, Xenocyprioides, Xenocypris, Yaoshanicus, and Zacco. Of these genera, the following were found to be monophyletic: Aphyocypris, Distoechodon, Hypophthalmichthys, Nipponocypris, Opsariichthys, Parachela, Paralaubuca, Plagiognathops, Xenocyprioides, and Xenocypris. The following genera were not monophyletic: Metzia, Hemiculter, Toxabramis, Ancherythroculter, Chanodichthys, Culter, Megalobrama. The remainder are either monotypic or were represented by only a single species. Four genera not examined in this study are provisionally classified in Oxygastrinae: Anabarilius, Longiculter, Pogobrama, and Rasborichthys.

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Year:  2013        PMID: 25232592     DOI: 10.11646/zootaxa.3681.2.1

Source DB:  PubMed          Journal:  Zootaxa        ISSN: 1175-5326            Impact factor:   1.091


  9 in total

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2.  Monsoon boosted radiation of the endemic East Asian carps.

Authors:  Chenguang Feng; Kun Wang; Wenjie Xu; Liandong Yang; Kunyuan Wanghe; Ning Sun; Baosheng Wu; Feixiang Wu; Lei Yang; Qiang Qiu; Xiaoni Gan; Yiyu Chen; Shunping He
Journal:  Sci China Life Sci       Date:  2022-09-23       Impact factor: 10.372

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Authors:  Shih-Pin Huang; Feng-Yu Wang; Tzi-Yuan Wang
Journal:  Zool Stud       Date:  2017-12-21       Impact factor: 2.058

4.  Resolving Cypriniformes relationships using an anchored enrichment approach.

Authors:  Carla C Stout; Milton Tan; Alan R Lemmon; Emily Moriarty Lemmon; Jonathan W Armbruster
Journal:  BMC Evol Biol       Date:  2016-11-09       Impact factor: 3.260

5.  Evolution of the connection patterns of the cephalic lateral line canal system and its use to diagnose opsariichthyin cyprinid fishes (Teleostei, Cyprinidae).

Authors:  Taiki Ito; Toyoaki Fukuda; Toshihiko Morimune; Kazumi Hosoya
Journal:  Zookeys       Date:  2017-12-04       Impact factor: 1.546

6.  Molecular identification and phylogenetic analysis of mitogenome of the Xenocypris davidi from Cao'e River.

Authors:  Haifang Xu; Yinjian Zhu; Daheng Zheng; Shoubao Yang
Journal:  Mitochondrial DNA B Resour       Date:  2019-11-12       Impact factor: 0.658

7.  Chromosome-Level Assembly of the Chinese Hooksnout Carp (Opsariichthys bidens) Genome Using PacBio Sequencing and Hi-C Technology.

Authors:  Xiaojun Xu; Wenzhi Guan; Baolong Niu; Dandan Guo; Qing-Ping Xie; Wei Zhan; Shaokui Yi; Bao Lou
Journal:  Front Genet       Date:  2022-01-19       Impact factor: 4.599

8.  FishPIE: A universal phylogenetically informative exon markers set for ray-finned fishes.

Authors:  Xidong Mu; Yexin Yang; Jinhui Sun; Meng Xu; Changwei Shao; Ka Hou Chu; Wei Li; Chao Liu; Dangen Gu; Miao Fang; Chi Zhang; Fei Liu; Hongmei Song; Xuejie Wang; Jiehu Chen; Ka Yan Ma
Journal:  iScience       Date:  2022-08-28

9.  MiFish, a set of universal PCR primers for metabarcoding environmental DNA from fishes: detection of more than 230 subtropical marine species.

Authors:  M Miya; Y Sato; T Fukunaga; T Sado; J Y Poulsen; K Sato; T Minamoto; S Yamamoto; H Yamanaka; H Araki; M Kondoh; W Iwasaki
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  9 in total

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