Literature DB >> 25228376

The complete mitochondrial genome of the deep-sea sponge Poecillastra laminaris (Astrophorida, Vulcanellidae).

Cong Zeng1, Leighton J Thomas1, Michelle Kelly2, Jonathan P A Gardner1.   

Abstract

The complete mitochondrial genome of a New Zealand specimen of the deep-sea sponge Poecillastra laminaris (Sollas, 1886) (Astrophorida, Vulcanellidae), from the Colville Ridge, New Zealand, was sequenced using the 454 Life Science pyrosequencing system. To identify homologous mitochondrial sequences, the 454 reads were mapped to the complete mitochondrial genome sequence of Geodia neptuni (GeneBank No. NC_006990). The P. laminaris genome is 18,413 bp in length and includes 14 protein-coding genes, 24 transfer RNA genes and 2 ribosomal RNA genes. Gene order resembled that of other demosponges. The base composition of the genome is A (29.1%), T (35.2%), C (14.0%) and G (21.7%). This is the second published mitogenome for a sponge of the order Astrophorida and will be useful in future phylogenetic analysis of deep-sea sponges.

Entities:  

Keywords:  Astrophorida; Poecillastra laminaris; deep-sea sponge; mitogenome; porifera

Mesh:

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Year:  2014        PMID: 25228376     DOI: 10.3109/19401736.2014.958716

Source DB:  PubMed          Journal:  Mitochondrial DNA A DNA Mapp Seq Anal        ISSN: 2470-1394            Impact factor:   1.514


  2 in total

1.  Divergence times in demosponges (Porifera): first insights from new mitogenomes and the inclusion of fossils in a birth-death clock model.

Authors:  Astrid Schuster; Sergio Vargas; Ingrid S Knapp; Shirley A Pomponi; Robert J Toonen; Dirk Erpenbeck; Gert Wörheide
Journal:  BMC Evol Biol       Date:  2018-07-18       Impact factor: 3.260

2.  The complete mitogenome of excavating sponge Thoosa mismalolli (Demospongiae, Tetractinellida, Thoosidae) from Northeastern Tropical Pacific.

Authors:  Eric Bautista-Guerrero; Raúl Llera-Herrera; José L Carballo; Axayácatl Rocha-Olivares; Alma P Rodríguez-Troncoso; Adrian González-Castillo; José A Cruz-Barraza
Journal:  Mitochondrial DNA B Resour       Date:  2020-01-16       Impact factor: 0.658

  2 in total

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