Literature DB >> 25219314

New approaches to facilitate rapid domestication of a wild plant to an oilseed crop: example pennycress (Thlaspi arvense L.).

John C Sedbrook1, Winthrop B Phippen2, M David Marks3.   

Abstract

Oilseed crops are sources of oils and seed meal having a multitude of uses. While the domestication of soybean and rapeseed took extended periods of time, new genome-based techniques have ushered in an era where crop domestication can occur rapidly. One attractive target for rapid domestication is the winter annual plant Field Pennycress (Thlaspi arvense L.; pennycress; Brassicaceae). Pennycress grows widespread throughout temperate regions of the world and could serve as a winter oilseed-producing cover crop. If grown throughout the USA Midwest Corn Belt, for example, pennycress could produce as much as 840L/ha oils and 1470kg/ha press-cake annually on 16 million hectares of farmland currently left fallow during the fall through spring months. However, wild pennycress strains have inconsistent germination and stand establishment, un-optimized maturity for a given growth zone, suboptimal oils and meal quality for biofuels and food production, and significant harvest loss due to pod shatter. In this review, we describe the virtues and current shortcomings of pennycress and discuss how knowledge from studying Arabidopsis thaliana and other Brassicas, in combination with the advent of affordable next generation sequencing, can bring about the rapid domestication and improvement of pennycress and other crops.
Copyright © 2014 Elsevier Ireland Ltd. All rights reserved.

Entities:  

Keywords:  Domestication; Next generation sequencing; Oilseed; Pennycress; TILLING; Thlaspi arvense

Mesh:

Substances:

Year:  2014        PMID: 25219314     DOI: 10.1016/j.plantsci.2014.07.008

Source DB:  PubMed          Journal:  Plant Sci        ISSN: 0168-9452            Impact factor:   4.729


  15 in total

1.  Development of first linkage map for Silphium integrifolium (Asteraceae) enables identification of sporophytic self-incompatibility locus.

Authors:  John H Price; Andrew R Raduski; Yaniv Brandvain; David L Van Tassel; Kevin P Smith
Journal:  Heredity (Edinb)       Date:  2022-04-18       Impact factor: 3.832

2.  CRISPR/Cas9-Induced fad2 and rod1 Mutations Stacked With fae1 Confer High Oleic Acid Seed Oil in Pennycress (Thlaspi arvense L.).

Authors:  Brice A Jarvis; Trevor B Romsdahl; Michaela G McGinn; Tara J Nazarenus; Edgar B Cahoon; Kent D Chapman; John C Sedbrook
Journal:  Front Plant Sci       Date:  2021-04-22       Impact factor: 5.753

3.  Natural variation and improved genome annotation of the emerging biofuel crop field pennycress (Thlaspi arvense).

Authors:  Tatiana García Navarrete; Cintia Arias; Eric Mukundi; Ana Paula Alonso; Erich Grotewold
Journal:  G3 (Bethesda)       Date:  2022-05-30       Impact factor: 3.542

4.  Chromosome-level Thlaspi arvense genome provides new tools for translational research and for a newly domesticated cash cover crop of the cooler climates.

Authors:  Adam Nunn; Isaac Rodríguez-Arévalo; Zenith Tandukar; Katherine Frels; Adrián Contreras-Garrido; Pablo Carbonell-Bejerano; Panpan Zhang; Daniela Ramos Cruz; Katharina Jandrasits; Christa Lanz; Anthony Brusa; Marie Mirouze; Kevin Dorn; David W Galbraith; Brice A Jarvis; John C Sedbrook; Donald L Wyse; Christian Otto; David Langenberger; Peter F Stadler; Detlef Weigel; M David Marks; James A Anderson; Claude Becker; Ratan Chopra
Journal:  Plant Biotechnol J       Date:  2022-02-06       Impact factor: 13.263

5.  A draft genome of field pennycress (Thlaspi arvense) provides tools for the domestication of a new winter biofuel crop.

Authors:  Kevin M Dorn; Johnathon D Fankhauser; Donald L Wyse; M David Marks
Journal:  DNA Res       Date:  2015-01-27       Impact factor: 4.458

6.  The pennycress (Thlaspi arvense L.) nectary: structural and transcriptomic characterization.

Authors:  Jason B Thomas; Marshall E Hampton; Kevin M Dorn; M David Marks; Clay J Carter
Journal:  BMC Plant Biol       Date:  2017-11-14       Impact factor: 4.215

7.  Pennycress, carbon wise: labeling experiments reveal how pennycress seeds efficiently incorporate carbon into biomass.

Authors:  John C Sedbrook; Timothy P Durrett
Journal:  J Exp Bot       Date:  2020-05-30       Impact factor: 6.992

8.  Molecular tools enabling pennycress (Thlaspi arvense) as a model plant and oilseed cash cover crop.

Authors:  Michaela McGinn; Winthrop B Phippen; Ratan Chopra; Sunil Bansal; Brice A Jarvis; Mary E Phippen; Kevin M Dorn; Maliheh Esfahanian; Tara J Nazarenus; Edgar B Cahoon; Timothy P Durrett; M David Marks; John C Sedbrook
Journal:  Plant Biotechnol J       Date:  2018-10-25       Impact factor: 9.803

Review 9.  How the pan-genome is changing crop genomics and improvement.

Authors:  Rafael Della Coletta; Yinjie Qiu; Shujun Ou; Matthew B Hufford; Candice N Hirsch
Journal:  Genome Biol       Date:  2021-01-04       Impact factor: 13.583

10.  Genomic analysis of field pennycress (Thlaspi arvense) provides insights into mechanisms of adaptation to high elevation.

Authors:  Yupeng Geng; Yabin Guan; Shugang Lu; Miao An; M James C Crabbe; Ji Qi; Fangqing Zhao; Qin Qiao; Ticao Zhang
Journal:  BMC Biol       Date:  2021-07-22       Impact factor: 7.431

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